Gene: COL.COLO4_15529
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_15529
- Transcript Identifier COL.rna14312
- Gene Type Coding gene
- Location AWUE01015704.1 : 30932-31567 : positive
Gene Family Information
- ID HOM05D008427
- #Genes/#Species 55/20
- Phylogenetic origin
- ID ORTHO05D010551
- #Genes/#Species 57/21
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid rna14312
- GenBank OMO96070.1
- id gene15501
- gene_name COLO4_15529
- uniprot A0A1R3JMU4
Descriptions
- Description hypothetical protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0090305 | IEA | GOA Database | nucleic acid phosphodiester bond hydrolysis | |
| GO:0006139 | IEA | GOA Database | nucleobase-containing compound metabolic process | |
| GO:0006139 | IEA | InterPro | nucleobase-containing compound metabolic process | |
| GO:2000630 | ISO | PLAZA Integrative Orthology | positive regulation of miRNA metabolic process | AT3G11770 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0008408 | IEA | GOA Database | 3'-5' exonuclease activity | |
| GO:0008408 | IEA | InterPro | 3'-5' exonuclease activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G11770 |
| GO:0008310 | ISO | PLAZA Integrative Orthology | single-stranded DNA 3'-5' exodeoxyribonuclease activity | AT3G11770 |
| GO:0043621 | ISO | PLAZA Integrative Orthology | protein self-association | AT3G11770 |
| GO:1905172 | ISO | PLAZA Integrative Orthology | RISC complex binding | AT3G11770 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT3G11770 |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT3G11770 |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT3G11770 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.2 | not assigned.not annotate |