Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G13570 Aethionema arabicum HOM05D001092 ORTHO05D000923 2.7e-172 608.6 311 100.0
Aa31LG2G13220 Aethionema arabicum HOM05D001092 ORTHO05D000923 5.6e-61 238.8 183 72.1
CARHR223710 Cardamine hirsuta HOM05D001092 ORTHO05D000923 6.2e-52 208.8 183 63.9
AL7G37590 Arabidopsis lyrata HOM05D001092 ORTHO05D000923 5.2e-51 205.7 183 63.4
A08p12900 Brassica napus HOM05D001092 ORTHO05D000923 8.9e-51 204.9 184 63.6
Carub.0007s2427 Capsella rubella HOM05D001092 ORTHO05D000923 1.2e-50 204.5 183 62.8
Sp7g17050 Schrenkiella parvula HOM05D001092 ORTHO05D000923 7.5e-50 201.8 184 62.5
BraA08t33273Z Brassica rapa HOM05D001092 ORTHO05D000923 1.7e-46 190.7 192 59.4
THA.LOC104814451 Tarenaya hassleriana HOM05D001092 ORTHO05D000923 3.0e-46 189.9 186 59.1
BolC8t48437H Brassica oleracea HOM05D001092 ORTHO05D000923 3.9e-46 189.5 192 58.9
AT4G17140 Arabidopsis thaliana HOM05D001092 ORTHO05D000923 2.9e-41 173.3 183 55.7
Dinv28897 Davidia involucrata HOM05D001092 ORTHO05D000923 1.5e-34 151.0 187 47.6
Ciclev10018424m.g Citrus clementina HOM05D001092 ORTHO05D000923 9.9e-34 148.3 187 47.1
MD06G1043800 Malus domestica HOM05D001092 ORTHO05D000923 2.2e-33 147.1 187 44.9
GSVIVG01013268001 Vitis vinifera HOM05D001092 ORTHO05D000923 6.4e-33 145.6 184 44.6
Cfa012359 Carpinus fangiana HOM05D001092 ORTHO05D000923 8.4e-33 145.2 209 42.6
FAN18G3751 Fragaria x ananassa HOM05D001092 ORTHO05D000923 1.9e-32 144.1 187 44.4
BcaC07g38054 Brassica carinata HOM05D001092 ORTHO05D000923 4.2e-32 142.9 183 51.4
FvH4_5g20820 Fragaria vesca HOM05D001092 ORTHO05D000923 4.2e-32 142.9 187 44.4
Atru.chr9.1144 Acer truncatum HOM05D001092 ORTHO05D000923 1.6e-31 141.0 187 46.0
PSO063G3710 Papaver somniferum HOM05D001092 ORTHO05D000923 2.1e-31 140.6 206 43.7
Gohir.D03G169100 Gossypium hirsutum HOM05D001092 ORTHO05D000923 2.7e-31 140.2 206 40.3
Gorai.003G179200 Gossypium raimondii HOM05D001092 ORTHO05D000923 2.7e-31 140.2 206 40.3
FAN08G1156 Fragaria x ananassa HOM05D001092 ORTHO05D000923 3.5e-31 139.8 126 56.3
ClCG09G012520 Citrullus lanatus HOM05D001092 ORTHO05D000923 1.7e-30 137.5 185 45.4
CiPaw.12G058400 Carya illinoinensis HOM05D001092 ORTHO05D000923 3.0e-30 136.7 187 44.9
RcHm_v2.0_Chr7g0207821 Rosa chinensis HOM05D001092 ORTHO05D000923 3.0e-30 136.7 209 40.7
MD04G1057200 Malus domestica HOM05D001092 ORTHO05D000923 3.9e-30 136.3 187 42.2
Manes.17G019783 Manihot esculenta HOM05D001092 ORTHO05D000923 3.9e-30 136.3 187 43.3
Prupe.5G050700 Prunus persica HOM05D001092 ORTHO05D000923 3.9e-30 136.3 209 39.2
TAR629G2120 Trochodendron aralioides HOM05D001092 ORTHO05D000923 6.6e-30 135.6 243 37.0
Potri.001G148800 Populus trichocarpa HOM05D001092 ORTHO05D000923 8.7e-30 135.2 248 34.7
Gohir.D08G181600 Gossypium hirsutum HOM05D001092 ORTHO05D000923 1.1e-29 134.8 184 42.9
Gorai.004G190500 Gossypium raimondii HOM05D001092 ORTHO05D000923 1.1e-29 134.8 184 42.9
Duzib205G0058 Durio zibethinus HOM05D001092 ORTHO05D000923 3.3e-29 133.3 206 39.8
Sc07g0008990 Simmondsia chinensis HOM05D001092 ORTHO05D000923 3.3e-29 133.3 187 40.6
MELO3C003359.2 Cucumis melo HOM05D001092 ORTHO05D000923 4.3e-29 132.9 185 43.2
DCAR_000729 Daucus carota HOM05D001092 ORTHO05D000923 4.3e-29 132.9 186 42.5
Rhsim11G0008300 Rhododendron simsii HOM05D001092 ORTHO05D000923 4.3e-29 132.9 198 41.9
Sed0007068 Sechium edule HOM05D001092 ORTHO05D000923 4.3e-29 132.9 185 43.2
Nn1g00699 Nelumbo nucifera HOM05D001092 ORTHO05D000923 5.6e-29 132.5 243 37.9
TPR.G33938 Trifolium pratense HOM05D001092 ORTHO05D000923 5.6e-29 132.5 187 42.8
TWI60G0589 Tripterygium wilfordii HOM05D001092 ORTHO05D000923 5.6e-29 132.5 208 41.3
Medtr5g013780 Medicago truncatula HOM05D001092 ORTHO05D000923 1.3e-28 131.3 187 41.7
CsaV3_3G049680 Cucumis sativus L. HOM05D001092 ORTHO05D000923 2.1e-28 130.6 185 42.2
FAN04G0578 Fragaria x ananassa HOM05D001092 ORTHO05D000923 3.6e-28 129.8 126 54.8
Thecc.03G236900 Theobroma cacao HOM05D001092 ORTHO05D000923 3.6e-28 129.8 184 41.3
Cc08_g01550 Coffea canephora HOM05D001092 ORTHO05D000923 4.8e-28 129.4 243 35.8
PGR031G0629 Punica granatum HOM05D001092 ORTHO05D000923 4.8e-28 129.4 219 37.4
Thhalv10024176m.g Eutrema salsugineum HOM05D001092 ORTHO05D000923 6.2e-28 129.0 184 46.2
EL10Ac5g12216 Beta vulgaris HOM05D001092 ORTHO05D000923 8.1e-28 128.6 187 40.6
Lj2g0026983 Lotus japonicus HOM05D001092 ORTHO05D000923 8.1e-28 128.6 186 41.4
Peaxi162Scf00084g00118 Petunia axillaris HOM05D001092 ORTHO05D000923 8.1e-28 128.6 221 36.2
Gohir.A08G161600 Gossypium hirsutum HOM05D001092 ORTHO05D000923 1.4e-27 127.9 184 41.3
Ca_26022_v3 Cicer arietinum L. HOM05D001092 ORTHO05D000923 1.8e-27 127.5 186 41.4
Nitab4.5_0001255g0080 Nicotiana tabacum HOM05D001092 ORTHO05D000923 2.4e-27 127.1 221 36.2
Aqoxy3G02588 Aquilegia oxysepala HOM05D001092 ORTHO05D000923 4.0e-27 126.3 187 40.1
COL.COLO4_06705 Corchorus olitorius HOM05D001092 ORTHO05D000923 4.0e-27 126.3 184 41.8
CANSAT21G2480 Cannabis sativa HOM05D001092 ORTHO05D000923 6.9e-27 125.6 187 39.6
Haze_08328 Corylus avellana HOM05D001092 ORTHO05D000923 6.9e-27 125.6 209 38.3
Psat2g175240 Pisum sativum HOM05D001092 ORTHO05D000923 6.9e-27 125.6 184 40.2
Sopen08g026080 Solanum pennellii HOM05D001092 ORTHO05D000923 6.9e-27 125.6 220 36.8
Actinidia25929 Actinidia chinensis HOM05D001092 ORTHO05D000923 9.0e-27 125.2 187 42.2
AUR62007201 Chenopodium quinoa HOM05D001092 ORTHO05D000923 1.5e-26 124.4 187 38.5
Ah.12g053800 Amaranthus hybridus HOM05D001092 ORTHO05D000923 3.4e-26 123.2 187 41.2
AUR62018801 Chenopodium quinoa HOM05D001092 ORTHO05D000923 5.8e-26 122.5 187 38.0
ECA246G3294 Erigeron canadensis HOM05D001092 ORTHO05D000923 5.8e-26 122.5 105 60.0
arahy.Tifrunner.gnm1.ann1.G3NGVJ Arachis hypogaea HOM05D001092 ORTHO05D000923 1.3e-25 121.3 187 39.6
arahy.Tifrunner.gnm1.ann1.PHJ2IJ Arachis hypogaea HOM05D001092 ORTHO05D000923 1.3e-25 121.3 187 39.6
Phvul.002G003000 Phaseolus vulgaris HOM05D001092 ORTHO05D000923 1.3e-25 121.3 183 41.0
Glyma.11G039900 Glycine max HOM05D001092 ORTHO05D000923 1.7e-25 120.9 186 41.4
unitig_21.g20375 Utricularia gibba HOM05D001092 ORTHO05D000923 1.7e-25 120.9 217 35.9
HanXRQChr17g0535661 Helianthus annuus HOM05D001092 ORTHO05D000923 4.9e-25 119.4 186 38.7
Lsat_1_v5_gn_3_15901 Lactuca sativa HOM05D001092 ORTHO05D000923 4.9e-25 119.4 186 40.9
CAN.G1445.5 Capsicum annuum HOM05D001092 ORTHO05D000923 8.4e-25 118.6 220 35.5
Nitab4.5_0006135g0040 Nicotiana tabacum HOM05D001092 ORTHO05D000923 1.9e-24 117.5 221 35.7
Actinidia03403 Actinidia chinensis HOM05D001092 ORTHO05D000923 4.2e-24 116.3 210 37.1
Oeu033911.2 Olea europaea HOM05D001092 ORTHO05D000923 4.2e-24 116.3 183 39.3
Lalb_Chr16g0379281 Lupinus albus HOM05D001092 ORTHO05D000923 3.5e-23 113.2 185 40.0
MBI04_g20742_MAGBIO Magnolia biondii HOM05D001092 ORTHO05D000923 1.7e-22 110.9 186 38.2
SGA_v2.0_scaffold20G09243 Striga asiatica HOM05D001092 ORTHO05D000923 1.5e-21 107.8 183 39.3
Sabra01G0118800 Salix brachista HOM05D001092 ORTHO05D000923 1.9e-21 107.5 219 35.6
Zm00001eb390790 Zea mays HOM05D001092 ORTHO05D000923 1.9e-21 107.5 206 34.0
MSTRG.1961 Avicennia marina HOM05D001092 ORTHO05D000923 7.3e-21 105.5 183 38.8
ATR0829G162 Amborella trichopoda HOM05D001092 ORTHO05D000923 2.6e-18 97.1 183 35.5
HPP92_014925 Vanilla planifolia HOM05D001092 ORTHO05D000923 4.5e-18 96.3 101 47.5
SEGI_29217 Sequoiadendron giganteum HOM05D001092 ORTHO05D000923 7.1e-16 89.0 206 32.5
HPP92_014930 Vanilla planifolia HOM05D001092 ORTHO05D000923 9.3e-16 88.6 94 47.9
CDE02G1948 Ceratophyllum demersum HOM05D001092 ORTHO05D000923 2.1e-15 87.4 246 29.7
CSS0002593 Camellia sinensis var. sinensis HOM05D001092 ORTHO05D000923 1.8e-14 84.3 71 60.6
Pp3c22_21110 Physcomitrium patens HOM05D001092 ORTHO05D000923 9.6e-13 78.6 192 29.2
Cpa.g.sc98.54 Carica papaya HOM05D001092 ORTHO05D000923 1.1e-11 75.1 141 37.6
AagrBONN_evm.TU.Sc2ySwM_362.876 Anthoceros agrestis HOM05D001092 ORTHO05D000923 3.1e-11 73.6 207 28.5
ClCG09G012500 Citrullus lanatus HOM05D001092 ORTHO05D000923 9.0e-11 72.0 35 94.3
Migut.E00809 Erythranthe guttata HOM05D001092 ORTHO05D000923 9.0e-11 72.0 35 94.3
Peaxi162Scf00084g00119 Petunia axillaris HOM05D001092 ORTHO05D000923 9.0e-11 72.0 35 94.3
Mapoly0105s0039 Marchantia polymorpha HOM05D001092 ORTHO05D000923 1.5e-10 71.2 150 34.0
Ca_30451_v3 Cicer arietinum L. HOM05D001092 ORTHO05D000923 2.6e-10 70.5 35 91.4
Ca_30453_v3 Cicer arietinum L. HOM05D001092 ORTHO05D000923 5.8e-10 69.3 69 53.6
Psat2g175200 Pisum sativum HOM05D001092 ORTHO05D000923 5.8e-10 69.3 35 88.6
SHI07566 Sapria himalayana HOM05D001092 ORTHO05D000923 5.8e-10 69.3 121 36.4
Rhsim11G0008200 Rhododendron simsii HOM05D001092 ORTHO05D000923 7.6e-10 68.9 35 88.6
Solyc08g077490.2 Solanum lycopersicum HOM05D001092 ORTHO05D000923 7.6e-10 68.9 35 91.4
Cpa.g.sc98.57 Carica papaya HOM05D001092 ORTHO05D000923 1.7e-09 67.8 32 100.0
Pp3c18_1370 Physcomitrium patens HOM05D001092 ORTHO05D000923 2.9e-09 67.0 192 28.1
Pp3c18_1376 Physcomitrium patens HOM05D001092 ORTHO05D000923 2.9e-09 67.0 192 28.1
MBI04_g20740_MAGBIO Magnolia biondii HOM05D001092 ORTHO05D000923 4.9e-09 66.2 35 82.9
SHI07558 Sapria himalayana HOM05D001092 ORTHO05D000923 4.9e-09 66.2 35 85.7
Actinidia04645 Actinidia chinensis HOM05D001092 ORTHO05D000923 1.4e-08 64.7 32 93.8
Actinidia22701 Actinidia chinensis HOM05D001092 ORTHO05D000923 1.4e-08 64.7 32 93.8
Actinidia28455 Actinidia chinensis HOM05D001092 ORTHO05D000923 1.4e-08 64.7 32 93.8
Actinidia33717 Actinidia chinensis HOM05D001092 ORTHO05D000923 1.4e-08 64.7 32 93.8
CSS0007978 Camellia sinensis var. sinensis HOM05D001092 ORTHO05D028395 2.7e-07 60.5 38 71.1
Cpa.g.sc98.53 Carica papaya HOM05D001092 ORTHO05D000923 2.7e-07 60.5 39 69.2
Nitab4.5_0001255g0090 Nicotiana tabacum HOM05D001092 ORTHO05D000923 4.6e-07 59.7 55 50.9
SEGI_32127 Sequoiadendron giganteum HOM05D001092 ORTHO05D000923 1.0e-06 58.5 35 68.6
MBI17_g28777_MAGBIO Magnolia biondii HOM05D002404 ORTHO05D028395 3.0e-06 57.0 121 33.9
SHI07563 Sapria himalayana HOM05D001092 ORTHO05D000923 3.0e-06 57.0 121 30.6
SMO356G0164 Selaginella moellendorffii HOM05D001092 ORTHO05D000923 5.1e-06 56.2 35 68.6


User provided reference genes

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