Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G10110 Aethionema arabicum HOM05D004873 ORTHO05D006122 0.0e+00 1330.5 940 100.0
AL2G16455 Arabidopsis lyrata HOM05D004873 ORTHO05D006122 2.3e-251 872.8 962 70.0
Carub.0002s0504 Capsella rubella HOM05D004873 ORTHO05D006122 5.1e-251 871.7 970 69.4
Sp2g04470 Schrenkiella parvula HOM05D004873 ORTHO05D006122 9.0e-248 860.9 961 69.5
Thhalv10023242m.g Eutrema salsugineum HOM05D004873 ORTHO05D006122 2.3e-243 846.3 968 71.2
BcaC06g31808 Brassica carinata HOM05D004873 ORTHO05D006122 4.8e-233 812.0 948 65.8
C01p36930 Brassica napus HOM05D004873 ORTHO05D006122 6.3e-233 811.6 946 65.1
BolC1t03651H Brassica oleracea HOM05D004873 ORTHO05D006122 1.4e-227 793.9 950 66.0
C04p26690 Brassica napus HOM05D004873 ORTHO05D006122 1.2e-223 780.8 944 62.8
BolC4t24137H Brassica oleracea HOM05D004873 ORTHO05D006122 1.2e-223 780.8 944 62.8
BcaC09g49418 Brassica carinata HOM05D004873 ORTHO05D006122 3.5e-223 779.2 942 65.2
A01p29150 Brassica napus HOM05D004873 ORTHO05D006122 1.3e-222 777.3 951 65.4
BraA01t02979Z Brassica rapa HOM05D004873 ORTHO05D006122 2.2e-222 776.5 951 65.3
BcaC02g10690 Brassica carinata HOM05D004873 ORTHO05D006122 2.3e-219 766.5 975 60.8
AT1G60200 Arabidopsis thaliana HOM05D004873 ORTHO05D006122 7.2e-213 745.0 783 72.8
CARHR052750 Cardamine hirsuta HOM05D004873 ORTHO05D006122 2.1e-212 743.4 795 68.7
BcaB04g20256 Brassica carinata HOM05D004873 ORTHO05D006122 8.8e-203 711.4 948 62.8
THA.LOC104819514 Tarenaya hassleriana HOM05D004873 ORTHO05D006122 3.7e-177 626.3 978 55.7
THA.LOC104819547 Tarenaya hassleriana HOM05D004873 ORTHO05D006122 4.0e-171 606.3 831 59.9
Duzib251G0436 Durio zibethinus HOM05D004873 ORTHO05D006122 2.6e-154 550.4 989 49.4
Atru.chr11.2013 Acer truncatum HOM05D004873 ORTHO05D006122 1.1e-152 545.0 991 49.4
TWI18G0605 Tripterygium wilfordii HOM05D004873 ORTHO05D006122 5.6e-149 532.7 983 52.5
Ciclev10030647m.g Citrus clementina HOM05D004873 ORTHO05D006122 6.9e-147 525.8 978 52.0
GSVIVG01020233001 Vitis vinifera HOM05D004873 ORTHO05D006122 6.9e-147 525.8 838 55.6
Duzib248G0479 Durio zibethinus HOM05D004873 ORTHO05D006122 4.5e-146 523.1 835 52.6
Haze_12170 Corylus avellana HOM05D004873 ORTHO05D006122 1.9e-144 517.7 813 58.8
TWI75G0297 Tripterygium wilfordii HOM05D004873 ORTHO05D006122 5.5e-144 516.2 983 53.5
COL.COLO4_36971 Corchorus olitorius HOM05D004873 ORTHO05D006122 5.1e-142 509.6 870 44.6
CiPaw.05G150500 Carya illinoinensis HOM05D004873 ORTHO05D006122 7.4e-141 505.8 844 54.4
TWI36G0907 Tripterygium wilfordii HOM05D004873 ORTHO05D006122 6.2e-140 502.7 832 57.3
RcHm_v2.0_Chr4g0443951 Rosa chinensis HOM05D004873 ORTHO05D006122 6.9e-139 499.2 834 52.0
C05p51270 Brassica napus HOM05D004873 ORTHO05D006122 9.0e-139 498.8 583 68.3
Eucgr.B03347 Eucalyptus grandis HOM05D004873 ORTHO05D006122 2.2e-137 494.2 906 51.7
FAN22G1569 Fragaria x ananassa HOM05D004873 ORTHO05D006122 3.2e-136 490.3 980 50.7
CSS0025142 Camellia sinensis var. sinensis HOM05D004873 ORTHO05D006122 9.3e-136 488.8 997 50.8
Sabra10G0067000 Salix brachista HOM05D004873 ORTHO05D006122 1.2e-135 488.4 819 58.1
Hma1.2p1_0160F.1_g070740 Hydrangea macrophylla HOM05D004873 ORTHO05D006122 2.7e-135 487.3 830 52.4
MBI15_g36943_MAGBIO Magnolia biondii HOM05D004873 ORTHO05D006122 2.7e-135 487.3 839 56.5
Manes.13G031000 Manihot esculenta HOM05D004873 ORTHO05D006122 6.0e-135 486.1 806 55.8
FvH4_4g34571 Fragaria vesca HOM05D004873 ORTHO05D006122 8.2e-132 475.7 975 48.9
FAN12G3868 Fragaria x ananassa HOM05D004873 ORTHO05D006122 1.2e-130 471.9 975 48.4
FAN17G2310 Fragaria x ananassa HOM05D004873 ORTHO05D006122 2.9e-129 467.2 972 50.3
DCAR_026543 Daucus carota HOM05D004873 ORTHO05D006122 3.8e-129 466.8 995 46.8
Sopen05g001620 Solanum pennellii HOM05D004873 ORTHO05D006122 5.0e-129 466.5 839 51.8
Cfa009139 Carpinus fangiana HOM05D004873 ORTHO05D006122 6.5e-129 466.1 995 48.8
CAN.G376.10 Capsicum annuum HOM05D004873 ORTHO05D006122 1.4e-128 464.9 837 51.3
Nn4g22808 Nelumbo nucifera HOM05D004873 ORTHO05D006122 1.4e-128 464.9 843 51.0
PGSC0003DMG400030977 Solanum tuberosum HOM05D004873 ORTHO05D006122 1.9e-128 464.5 840 52.5
TAR622G0484 Trochodendron aralioides HOM05D004873 ORTHO05D006122 1.9e-128 464.5 828 55.7
MELO3C012001.2 Cucumis melo HOM05D004873 ORTHO05D006122 4.2e-128 463.4 1027 45.8
Glyma.01G031400 Glycine max HOM05D004873 ORTHO05D006122 7.2e-128 462.6 983 49.2
Potri.010G094700 Populus trichocarpa HOM05D004873 ORTHO05D006122 2.1e-127 461.1 979 52.2
arahy.Tifrunner.gnm1.ann1.SJZ9IC Arachis hypogaea HOM05D004873 ORTHO05D006122 4.6e-127 459.9 823 52.7
QL03p061438 Quercus lobata HOM05D004873 ORTHO05D006122 7.9e-127 459.1 806 52.6
TAR374G0217 Trochodendron aralioides HOM05D004873 ORTHO05D006122 3.0e-126 457.2 1027 50.3
VMungo1215G2983 Vigna mungo HOM05D004873 ORTHO05D006122 3.0e-126 457.2 838 54.4
FAN07G2437 Fragaria x ananassa HOM05D004873 ORTHO05D006122 5.1e-126 456.4 788 53.2
Dinv24864 Davidia involucrata HOM05D004873 ORTHO05D006122 6.7e-126 456.1 822 48.2
Gorai.005G183000 Gossypium raimondii HOM05D004873 ORTHO05D006122 8.8e-126 455.7 815 51.4
Ca_04600_v3 Cicer arietinum L. HOM05D004873 ORTHO05D006122 2.5e-125 454.1 937 45.8
ClCG05G025280 Citrullus lanatus HOM05D004873 ORTHO05D006122 2.5e-125 454.1 807 52.4
DCAR_024143 Daucus carota HOM05D004873 ORTHO05D006122 2.5e-125 454.1 930 47.0
Phvul.002G071900 Phaseolus vulgaris HOM05D004873 ORTHO05D006122 4.3e-125 453.4 810 55.3
Gohir.D02G163000 Gossypium hirsutum HOM05D004873 ORTHO05D006122 9.7e-125 452.2 815 51.0
Aqoxy3G02990_Aqoxy3G02991 Aquilegia oxysepala HOM05D004873 ORTHO05D006122 2.8e-124 450.7 832 53.4
arahy.Tifrunner.gnm1.ann1.QGK7DH Arachis hypogaea HOM05D004873 ORTHO05D006122 3.7e-124 450.3 846 52.4
TPR.G13590 Trifolium pratense HOM05D004873 ORTHO05D006122 3.7e-124 450.3 850 50.6
Potri.008G147100 Populus trichocarpa HOM05D004873 ORTHO05D006122 8.2e-124 449.1 816 50.2
Medtr5g034430 Medicago truncatula HOM05D004873 ORTHO05D006122 4.1e-123 446.8 993 46.6
Cpa.g.sc69.19 Carica papaya HOM05D004873 ORTHO05D006122 1.5e-122 444.9 848 44.7
Lalb_Chr16g0392411 Lupinus albus HOM05D004873 ORTHO05D006122 2.6e-122 444.1 798 53.4
Cc11_g14610 Coffea canephora HOM05D004873 ORTHO05D006122 4.5e-122 443.4 925 49.0
Dinv15307 Davidia involucrata HOM05D004873 ORTHO05D006122 4.5e-122 443.4 804 54.9
Sed0006362 Sechium edule HOM05D004873 ORTHO05D006122 1.3e-121 441.8 809 50.1
Psat2g106600 Pisum sativum HOM05D004873 ORTHO05D006122 2.9e-121 440.7 807 51.4
Actinidia01706 Actinidia chinensis HOM05D004873 ORTHO05D006122 1.1e-120 438.7 844 49.4
Oeu055452.2 Olea europaea HOM05D004873 ORTHO05D006122 5.5e-120 436.4 893 44.2
Glyma.02G034300 Glycine max HOM05D004873 ORTHO05D006122 7.2e-120 436.0 796 53.5
vmacro01183 Vaccinium macrocarpon HOM05D004873 ORTHO05D006122 1.2e-119 435.3 851 51.7
Prupe.1G254700 Prunus persica HOM05D004873 ORTHO05D006122 2.3e-118 431.0 801 54.1
HPP92_019184 Vanilla planifolia HOM05D004873 ORTHO05D006122 2.3e-118 431.0 836 47.2
CsaV3_5G031610 Cucumis sativus L. HOM05D004873 ORTHO05D006122 4.8e-116 423.3 798 50.3
Migut.L01408 Erythranthe guttata HOM05D004873 ORTHO05D006122 4.8e-116 423.3 836 47.8
Peaxi162Scf00338g00218 Petunia axillaris HOM05D004873 ORTHO05D006122 1.1e-115 422.2 811 49.0
PGR102G2017 Punica granatum HOM05D004873 ORTHO05D006122 1.1e-115 422.2 847 51.1
AUR62005371 Chenopodium quinoa HOM05D004873 ORTHO05D006122 9.1e-115 419.1 802 46.6
MSTRG.7893 Avicennia marina HOM05D004873 ORTHO05D006122 1.2e-114 418.7 775 49.0
SGA_v2.0_scaffold165G38251 Striga asiatica HOM05D004873 ORTHO05D006122 2.0e-114 417.9 959 42.0
Hma1.2p1_0867F.1_g230230 Hydrangea macrophylla HOM05D004873 ORTHO05D006122 1.7e-113 414.8 839 47.0
Lalb_Chr05g0228131 Lupinus albus HOM05D004873 ORTHO05D006122 1.7e-113 414.8 806 52.4
Lj2g0008447 Lotus japonicus HOM05D004873 ORTHO05D006122 5.0e-113 413.3 815 52.9
Lj6A805G39 Lonicera japonica HOM05D004873 ORTHO05D006122 6.5e-113 412.9 816 48.5
CANSAT01G1467 Cannabis sativa HOM05D004873 ORTHO05D006122 1.1e-112 412.1 848 47.4
MD13G1091200 Malus domestica HOM05D004873 ORTHO05D006122 1.1e-112 412.1 801 49.9
Gohir.A03G140300 Gossypium hirsutum HOM05D004873 ORTHO05D006122 1.9e-112 411.4 798 50.9
PSO063G1237 Papaver somniferum HOM05D004873 ORTHO05D006122 1.9e-112 411.4 843 53.7
Lsat_1_v5_gn_4_6981 Lactuca sativa HOM05D004873 ORTHO05D006122 2.5e-112 411.0 816 51.0
MD16G1091700 Malus domestica HOM05D004873 ORTHO05D006122 2.1e-111 407.9 812 49.5
ECA199G0004 Erigeron canadensis HOM05D004873 ORTHO05D006122 4.7e-111 406.8 830 53.3
HanXRQChr12g0383471 Helianthus annuus HOM05D004873 ORTHO05D006122 2.6e-109 401.0 835 51.7
Thecc.02G248000 Theobroma cacao HOM05D004873 ORTHO05D006122 1.3e-108 398.7 735 52.9
Nitab4.5_0000113g0270 Nicotiana tabacum HOM05D004873 ORTHO05D006122 1.7e-108 398.3 841 39.4
Rhsim12G0047400 Rhododendron simsii HOM05D004873 ORTHO05D006122 6.3e-108 396.4 891 48.8
PSO832G2005 Papaver somniferum HOM05D004873 ORTHO05D006122 1.4e-107 395.2 841 51.4
ATR0691G293 Amborella trichopoda HOM05D004873 ORTHO05D006122 7.0e-107 392.9 838 50.4
Sc11g0001220 Simmondsia chinensis HOM05D004873 ORTHO05D006122 2.5e-104 384.4 776 49.7
HPP92_019185 Vanilla planifolia HOM05D004873 ORTHO05D006122 7.0e-99 366.3 836 44.0
EL10Ac6g13668 Beta vulgaris HOM05D004873 ORTHO05D006122 1.2e-98 365.5 795 52.5
unitig_27.g25195 Utricularia gibba HOM05D004873 ORTHO05D006122 4.5e-98 363.6 828 45.8
AUR62014033 Chenopodium quinoa HOM05D004873 ORTHO05D006122 4.2e-96 357.1 801 44.6
Lalb_Chr05g0216921 Lupinus albus HOM05D004873 ORTHO05D006122 2.1e-95 354.8 756 42.7
Zm00001eb042420 Zea mays HOM05D004873 ORTHO05D006122 5.4e-91 340.1 801 49.7
Hund05991 Selenicereus undatus HOM05D004873 ORTHO05D006122 1.6e-90 338.6 825 48.8
SEGI_30430 Sequoiadendron giganteum HOM05D004873 ORTHO05D006122 1.8e-86 325.1 810 47.4
Mapoly0148s0032 Marchantia polymorpha HOM05D004873 ORTHO05D006122 2.9e-81 307.8 843 47.0
Pp3c25_3310 Physcomitrium patens HOM05D004873 ORTHO05D006122 1.3e-76 292.4 836 45.5
Zm00001eb179020 Zea mays HOM05D004873 ORTHO05D006122 2.7e-74 284.6 794 48.4
TAR629G1177 Trochodendron aralioides HOM05D004873 ORTHO05D006122 1.1e-72 279.3 768 36.6
Ah.03g132650 Amaranthus hybridus HOM05D004873 ORTHO05D006122 6.8e-70 270.0 986 40.1
Pp3c16_19090 Physcomitrium patens HOM05D004873 ORTHO05D006122 2.6e-69 268.1 845 44.4
Nitab4.5_0010954g0010 Nicotiana tabacum HOM05D004873 ORTHO05D006122 3.9e-65 254.2 276 51.4
Actinidia08168 Actinidia chinensis HOM05D004873 ORTHO05D006122 5.1e-65 253.8 501 44.1
FvH4_4g34570 Fragaria vesca HOM05D004873 ORTHO05D006122 1.2e-63 249.2 284 52.1
Oeu056734.1 Olea europaea HOM05D004873 ORTHO05D006122 2.0e-61 241.9 791 41.6
Solyc05g005620.4 Solanum lycopersicum HOM05D004873 ORTHO05D006122 2.2e-60 238.4 325 50.8
FAN12G0889 Fragaria x ananassa HOM05D004873 ORTHO05D006122 7.8e-58 229.9 268 51.5
PSO675G2898 Papaver somniferum HOM05D004873 ORTHO05D006122 9.9e-53 213.0 283 47.3
CDE01G0488 Ceratophyllum demersum HOM05D004873 ORTHO05D006122 5.1e-49 200.7 239 54.8
SMO117G0118 Selaginella moellendorffii HOM05D004873 ORTHO05D006122 1.6e-47 195.7 837 36.3
Os08g0416400 Oryza sativa ssp. japonica HOM05D004873 ORTHO05D006122 6.2e-47 193.7 359 41.5
CDE02G2726 Ceratophyllum demersum HOM05D004873 ORTHO05D006122 2.4e-43 181.8 199 52.3
CBR_g45271 Chara braunii HOM05D000019 ORTHO05D000002 9.3e-43 179.9 284 46.5
CDE01G0278 Ceratophyllum demersum HOM05D004873 ORTHO05D006122 1.2e-42 179.5 344 40.1
CDE02G2297 Ceratophyllum demersum HOM05D001801 ORTHO05D001739 5.4e-35 154.1 157 55.4
SHI27198 Sapria himalayana HOM05D004873 ORTHO05D006122 2.5e-32 145.2 131 56.5
Aqoxy1G03520 Aquilegia oxysepala HOM05D004873 ORTHO05D006122 9.6e-24 116.7 70 81.4
Medtr5g034435 Medicago truncatula HOM05D004873 ORTHO05D006122 9.0e-22 110.2 69 81.2
MCO16G428 Micromonas commoda HOM05D004873 ORTHO05D006122 1.4e-19 102.8 97 47.4
Cre08.g375084 Chlamydomonas reinhardtii HOM05D004873 ORTHO05D006122 2.3e-17 95.5 180 38.9
PRCOL_00005912 Prasinoderma coloniale HOM05D004873 ORTHO05D006122 1.2e-13 83.2 101 41.6
Lsat_1_v5_gn_5_2020 Lactuca sativa HOM05D004873 ORTHO05D026408 3.4e-13 81.6 142 38.7
SMO119G0006 Selaginella moellendorffii HOM05D004873 ORTHO05D006122 5.9e-13 80.9 128 40.6
PSO339G1217 Papaver somniferum HOM05D004873 ORTHO05D006122 1.1e-11 76.6 106 37.7
Sp6g02640 Schrenkiella parvula HOM05D004873 ORTHO05D006122 2.5e-11 75.5 133 44.4
Actinidia27784 Actinidia chinensis HOM05D004873 ORTHO05D026408 5.5e-11 74.3 72 51.4
PSO017G6017 Papaver somniferum HOM05D004873 ORTHO05D006122 3.6e-10 71.6 141 35.5
Lsat_1_v5_gn_6_33360 Lactuca sativa HOM05D004873 ORTHO05D026408 5.7e-08 64.3 201 32.3


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