Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62040778 Chenopodium quinoa HOM05D004159 ORTHO05D005858 0.0e+00 1128.6 567 100.0
AUR62040779 Chenopodium quinoa HOM05D004159 ORTHO05D005858 1.5e-298 1028.9 547 94.7
AUR62029204 Chenopodium quinoa HOM05D004159 ORTHO05D005858 6.4e-289 996.9 580 88.3
EL10Ac8g19455 Beta vulgaris HOM05D004159 ORTHO05D005858 3.0e-278 961.4 580 82.4
Ah.09g231680 Amaranthus hybridus HOM05D004159 ORTHO05D005858 6.9e-251 870.5 591 74.5
Hund22314 Selenicereus undatus HOM05D004159 ORTHO05D005858 3.9e-230 801.6 583 68.8
Actinidia09406 Actinidia chinensis HOM05D004159 ORTHO05D005858 1.4e-224 783.1 597 66.2
TAR371G0318 Trochodendron aralioides HOM05D004159 ORTHO05D005858 3.2e-224 781.9 597 65.3
GSVIVG01032412001 Vitis vinifera HOM05D004159 ORTHO05D005858 5.5e-224 781.2 603 65.0
Nn3g16747 Nelumbo nucifera HOM05D004159 ORTHO05D005858 2.3e-222 775.8 603 65.2
CSS0048893 Camellia sinensis var. sinensis HOM05D004159 ORTHO05D005858 3.0e-222 775.4 597 64.7
Rhsim10G0017800 Rhododendron simsii HOM05D004159 ORTHO05D005858 1.7e-220 769.6 597 65.3
TAR629G3285 Trochodendron aralioides HOM05D004159 ORTHO05D005858 2.8e-220 768.8 597 63.8
Cc07_g01750 Coffea canephora HOM05D004159 ORTHO05D005858 9.1e-219 763.8 600 64.5
Peaxi162Scf00700g00427 Petunia axillaris HOM05D004159 ORTHO05D005858 2.0e-218 762.7 594 64.1
PGR142G2553 Punica granatum HOM05D004159 ORTHO05D005858 1.3e-217 760.0 609 62.7
MBI16_g23841_MAGBIO Magnolia biondii HOM05D004159 ORTHO05D005858 5.0e-217 758.1 602 63.8
Lj7C599T6 Lonicera japonica HOM05D004159 ORTHO05D005858 6.5e-217 757.7 596 64.3
Haze_14736 Corylus avellana HOM05D004159 ORTHO05D005858 1.1e-216 756.9 602 64.0
CANSAT64G2890 Cannabis sativa HOM05D004159 ORTHO05D005858 3.2e-216 755.4 595 63.2
Eucgr.I01748 Eucalyptus grandis HOM05D004159 ORTHO05D005858 4.2e-216 755.0 588 63.3
Solyc07g047670.3 Solanum lycopersicum HOM05D004159 ORTHO05D005858 1.6e-215 753.1 600 61.8
Hma1.2p1_0078F.1_g040070 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 7.9e-215 750.7 593 63.6
Os03g0699200 Oryza sativa ssp. japonica HOM05D004159 ORTHO05D005858 2.3e-214 749.2 597 61.8
Cfa007372 Carpinus fangiana HOM05D004159 ORTHO05D005858 3.0e-214 748.8 602 63.5
HanXRQChr04g0114031 Helianthus annuus HOM05D004159 ORTHO05D005858 6.7e-214 747.7 583 63.6
CiPaw.03G043300 Carya illinoinensis HOM05D004159 ORTHO05D005858 1.5e-213 746.5 602 62.6
vmacro05861 Vaccinium macrocarpon HOM05D004159 ORTHO05D005858 3.3e-213 745.3 636 60.4
CiPaw.04G028300 Carya illinoinensis HOM05D004159 ORTHO05D005858 4.4e-213 745.0 602 63.3
QL02p074797 Quercus lobata HOM05D004159 ORTHO05D005858 1.3e-212 743.4 595 62.5
PGSC0003DMG400006122 Solanum tuberosum HOM05D004159 ORTHO05D005858 1.3e-212 743.4 618 61.0
Potri.004G121400 Populus trichocarpa HOM05D004159 ORTHO05D005858 2.8e-212 742.3 597 62.3
TWI56G0312 Tripterygium wilfordii HOM05D004159 ORTHO05D005858 3.7e-212 741.9 602 61.6
HanXRQChr14g0462651 Helianthus annuus HOM05D004159 ORTHO05D005858 8.2e-212 740.7 585 62.2
THA.LOC104824006 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 8.2e-212 740.7 597 62.6
VMungo0720G1997 Vigna mungo HOM05D004159 ORTHO05D005858 8.2e-212 740.7 599 62.1
Lsat_1_v5_gn_2_51000 Lactuca sativa HOM05D004159 ORTHO05D005858 1.5e-210 736.5 596 61.7
Thhalv10013046m.g Eutrema salsugineum HOM05D004159 ORTHO05D005858 5.9e-210 734.6 592 61.5
Phvul.007G070900 Phaseolus vulgaris HOM05D004159 ORTHO05D005858 1.0e-209 733.8 600 61.5
Zm00001eb053960 Zea mays HOM05D004159 ORTHO05D005858 1.3e-209 733.4 611 59.7
CDE07G0971 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 2.9e-209 732.3 602 61.5
Sabra04G0067000 Salix brachista HOM05D004159 ORTHO05D005858 2.9e-209 732.3 597 61.0
AT5G14520 Arabidopsis thaliana HOM05D004159 ORTHO05D005858 6.5e-209 731.1 587 61.7
Gohir.A07G222900 Gossypium hirsutum HOM05D004159 ORTHO05D005858 8.5e-209 730.7 586 62.6
MD17G1027600 Malus domestica HOM05D004159 ORTHO05D005858 8.5e-209 730.7 598 61.5
CAN.G1819.1 Capsicum annuum HOM05D004159 ORTHO05D005858 1.4e-208 729.9 606 61.4
Gorai.001G264700 Gossypium raimondii HOM05D004159 ORTHO05D005858 1.4e-208 729.9 586 62.6
arahy.Tifrunner.gnm1.ann1.M4LD34 Arachis hypogaea HOM05D004159 ORTHO05D005858 1.9e-208 729.6 605 60.3
Gohir.D07G229600 Gossypium hirsutum HOM05D004159 ORTHO05D005858 3.2e-208 728.8 586 62.6
Sp6g29490 Schrenkiella parvula HOM05D004159 ORTHO05D005858 9.4e-208 727.2 587 61.5
MSTRG.20029 Avicennia marina HOM05D004159 ORTHO05D005858 1.6e-207 726.5 598 61.9
ClCG01G013750 Citrullus lanatus HOM05D004159 ORTHO05D005858 2.1e-207 726.1 595 61.5
BcaB01g05107 Brassica carinata HOM05D004159 ORTHO05D005858 2.7e-207 725.7 591 60.9
Sed0001839 Sechium edule HOM05D004159 ORTHO05D005858 2.7e-207 725.7 593 60.5
Nitab4.5_0006221g0020 Nicotiana tabacum HOM05D004159 ORTHO05D005858 6.1e-207 724.5 623 59.1
Ciclev10014699m.g Citrus clementina HOM05D004159 ORTHO05D005858 1.4e-206 723.4 587 62.4
Glyma.19G232500 Glycine max HOM05D004159 ORTHO05D005858 2.3e-206 722.6 600 59.7
ECA240G1354 Erigeron canadensis HOM05D004159 ORTHO05D005858 3.0e-206 722.2 584 61.6
Sed0003581 Sechium edule HOM05D004159 ORTHO05D005858 3.0e-206 722.2 593 60.2
BolC3t13270H Brassica oleracea HOM05D004159 ORTHO05D005858 6.7e-206 721.1 592 60.8
C03p07700 Brassica napus HOM05D004159 ORTHO05D005858 8.8e-206 720.7 592 61.0
Duzib264G0191 Durio zibethinus HOM05D004159 ORTHO05D005858 1.5e-205 719.9 588 62.4
Thecc.04G016700 Theobroma cacao HOM05D004159 ORTHO05D005858 1.5e-205 719.9 588 62.1
CARHR198790 Cardamine hirsuta HOM05D004159 ORTHO05D005858 2.0e-205 719.5 584 61.1
AL6G25270 Arabidopsis lyrata HOM05D004159 ORTHO05D005858 2.6e-205 719.2 557 63.7
Glyma.03G234900 Glycine max HOM05D004159 ORTHO05D005858 2.6e-205 719.2 599 59.8
MD09G1027600 Malus domestica HOM05D004159 ORTHO05D005858 3.3e-205 718.8 578 62.3
Lj1g0017236 Lotus japonicus HOM05D004159 ORTHO05D005858 4.4e-205 718.4 605 59.8
BraA03t10001Z Brassica rapa HOM05D004159 ORTHO05D005858 7.4e-205 717.6 595 61.0
Aqoxy5G03802 Aquilegia oxysepala HOM05D004159 ORTHO05D005858 9.7e-205 717.2 591 60.7
Manes.17G112500 Manihot esculenta HOM05D004159 ORTHO05D005858 1.3e-204 716.8 595 60.2
Atru.chr6.2388 Acer truncatum HOM05D004159 ORTHO05D005858 1.7e-204 716.5 587 62.2
LjContig00272g0012452 Lotus japonicus HOM05D004159 ORTHO05D005858 1.7e-204 716.5 605 59.5
DCAR_021719 Daucus carota HOM05D004159 ORTHO05D005858 3.7e-204 715.3 599 61.9
A03p06670 Brassica napus HOM05D004159 ORTHO05D005858 4.8e-204 714.9 595 60.7
PSO017G2175 Papaver somniferum HOM05D004159 ORTHO05D005858 8.2e-204 714.1 580 60.5
ATR1132G032 Amborella trichopoda HOM05D004159 ORTHO05D005858 1.1e-203 713.8 596 59.4
THA.LOC104822401 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 1.1e-203 713.8 589 61.1
Prupe.3G291100 Prunus persica HOM05D004159 ORTHO05D005858 2.4e-203 712.6 594 59.6
COL.COLO4_29105 Corchorus olitorius HOM05D004159 ORTHO05D005858 4.1e-203 711.8 577 62.0
Duzib187G0134 Durio zibethinus HOM05D004159 ORTHO05D005858 5.3e-203 711.4 587 61.3
Nitab4.5_0003930g0060 Nicotiana tabacum HOM05D004159 ORTHO05D005858 5.3e-203 711.4 599 59.8
Migut.N01406 Erythranthe guttata HOM05D004159 ORTHO05D005858 9.1e-203 710.7 586 62.1
Cpa.g.sc108.65 Carica papaya HOM05D004159 ORTHO05D005858 2.6e-202 709.1 609 59.3
Migut.B00156 Erythranthe guttata HOM05D004159 ORTHO05D005858 3.5e-202 708.8 588 61.6
SGA_v2.0_scaffold32G13248 Striga asiatica HOM05D004159 ORTHO05D005858 4.5e-202 708.4 599 60.9
Lalb_Chr06g0175751 Lupinus albus HOM05D004159 ORTHO05D005858 6.5e-201 704.5 605 58.7
Lalb_Chr02g0160481 Lupinus albus HOM05D004159 ORTHO05D005858 1.5e-200 703.4 604 59.3
Medtr7g100040 Medicago truncatula HOM05D004159 ORTHO05D005858 4.7e-199 698.4 606 58.6
Psat0s1782g0040 Pisum sativum HOM05D004159 ORTHO05D005858 5.2e-198 694.9 609 58.9
CsaV3_1G014060 Cucumis sativus L. HOM05D004159 ORTHO05D005858 1.2e-197 693.7 598 59.4
SalBow6G0855 Salvia bowleyana HOM05D004159 ORTHO05D005858 3.4e-197 692.2 589 59.6
Ca_26485_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 4.4e-197 691.8 592 60.8
MELO3C004873.2 Cucumis melo HOM05D004159 ORTHO05D005858 4.4e-197 691.8 594 60.1
PSO764G0137 Papaver somniferum HOM05D004159 ORTHO05D005858 2.2e-196 689.5 588 58.5
Aa31LG11G15290 Aethionema arabicum HOM05D004159 ORTHO05D005858 6.3e-196 688.0 603 57.5
Carub.0006s1270 Capsella rubella HOM05D004159 ORTHO05D005858 4.1e-195 685.3 545 62.4
TPR.G1071 Trifolium pratense HOM05D004159 ORTHO05D005858 5.9e-194 681.4 601 58.4
Oeu048622.3 Olea europaea HOM05D004159 ORTHO05D005858 1.2e-191 673.7 582 58.4
RcHm_v2.0_Chr5g0047391 Rosa chinensis HOM05D004159 ORTHO05D005858 4.7e-191 671.8 592 58.4
Dinv33444 Davidia involucrata HOM05D004159 ORTHO05D005858 6.1e-191 671.4 538 63.2
Prupe.8G015200 Prunus persica HOM05D004159 ORTHO05D005858 8.0e-191 671.0 597 57.6
Prupe.8G015700 Prunus persica HOM05D004159 ORTHO05D005858 5.2e-190 668.3 597 57.5
unitig_21.g20810 Utricularia gibba HOM05D004159 ORTHO05D005858 9.8e-189 664.1 587 59.1
FAN25G3844 Fragaria x ananassa HOM05D004159 ORTHO05D005858 4.8e-188 661.8 593 58.0
Lsat_1_v5_gn_4_179560 Lactuca sativa HOM05D004159 ORTHO05D005858 4.8e-188 661.8 569 58.2
FvH4_3g26080 Fragaria vesca HOM05D004159 ORTHO05D005858 2.4e-187 659.4 593 57.5
FAN11G1291 Fragaria x ananassa HOM05D004159 ORTHO05D005858 2.4e-187 659.4 593 57.5
FAN16G1867 Fragaria x ananassa HOM05D004159 ORTHO05D005858 2.7e-186 656.0 593 57.7
CDE06G0546 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 1.0e-185 654.1 610 56.4
FAN21G3616 Fragaria x ananassa HOM05D004159 ORTHO05D005858 1.9e-184 649.8 593 57.0
PSO478G0945 Papaver somniferum HOM05D004159 ORTHO05D005858 1.4e-179 633.6 580 55.9
SEGI_02382 Sequoiadendron giganteum HOM05D004159 ORTHO05D005858 9.2e-179 630.9 596 55.2
HPP92_005716 Vanilla planifolia HOM05D004159 ORTHO05D005858 1.7e-177 626.7 594 55.2
ClCG11G000220 Citrullus lanatus HOM05D004159 ORTHO05D005858 6.6e-177 624.8 575 57.2
Prupe.4G071200 Prunus persica HOM05D004159 ORTHO05D005858 8.6e-177 624.4 595 55.5
Sopen07g024120 Solanum pennellii HOM05D004159 ORTHO05D005858 1.2e-175 620.5 522 59.8
Medtr8g010330 Medicago truncatula HOM05D004159 ORTHO05D005858 1.9e-171 606.7 585 54.0
ECA248G2726 Erigeron canadensis HOM05D004159 ORTHO05D005858 1.0e-161 574.3 585 52.5
SMO356G0182 Selaginella moellendorffii HOM05D004159 ORTHO05D005858 1.5e-157 560.5 591 50.8
Mapoly0138s0023 Marchantia polymorpha HOM05D004159 ORTHO05D005858 1.5e-152 543.9 582 48.8
AagrBONN_evm.TU.Sc2ySwM_362.1908 Anthoceros agrestis HOM05D004159 ORTHO05D005858 4.3e-152 542.3 614 47.2
arahy.Tifrunner.gnm1.ann1.M9AKWN Arachis hypogaea HOM05D004159 ORTHO05D005858 9.9e-149 531.2 466 57.7
Pp3c3_23250 Physcomitrium patens HOM05D004159 ORTHO05D005858 2.0e-141 506.9 586 46.6
Nitab4.5_0008375g0010 Nicotiana tabacum HOM05D004159 ORTHO05D005858 1.9e-139 500.4 428 57.2
CBR_g38896 Chara braunii HOM05D004159 ORTHO05D005858 3.8e-132 476.1 586 45.2
Dinv35104 Davidia involucrata HOM05D004159 ORTHO05D005858 1.3e-121 441.0 394 60.7
TPR.G27000 Trifolium pratense HOM05D004159 ORTHO05D005858 3.9e-121 439.5 482 48.8
Sc03g0007500 Simmondsia chinensis HOM05D004159 ORTHO05D005858 4.3e-120 436.0 314 69.4
Cre16.g683793 Chlamydomonas reinhardtii HOM05D004159 ORTHO05D005858 7.4e-120 435.3 632 39.2
Ca_22754_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 1.0e-113 414.8 358 60.1
MCO04G526 Micromonas commoda HOM05D004159 ORTHO05D005858 5.1e-113 412.5 452 46.9
Hma1.2p1_2964F.1_g330970 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 5.9e-109 399.1 317 63.4
PRCOL_00002170 Prasinoderma coloniale HOM05D004159 ORTHO05D005858 3.2e-107 393.3 444 45.5
Hma1.2p1_0999F.1_g246250 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.8e-89 334.3 354 51.7
Zm00001eb053940 Zea mays HOM05D004159 ORTHO05D005858 1.1e-83 315.1 323 51.7
Haze_26879 Corylus avellana HOM05D004159 ORTHO05D005858 3.0e-81 307.0 641 32.3
Cfa027221 Carpinus fangiana HOM05D004159 ORTHO05D006938 6.8e-73 279.3 486 37.0
RcHm_v2.0_Chr5g0047861 Rosa chinensis HOM05D004159 ORTHO05D036595 2.9e-68 263.8 183 68.9
Sc03g0007510 Simmondsia chinensis HOM05D004159 ORTHO05D005858 4.0e-65 253.4 162 75.3
Psat1g081880 Pisum sativum HOM05D004159 ORTHO05D019349 1.3e-60 238.4 194 61.9
BcaB01g05108 Brassica carinata HOM05D004159 ORTHO05D005858 8.3e-55 219.2 222 49.1
Hma1.2p1_0999F.1_g246240 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 2.1e-50 204.5 136 67.6
PSO675G5574 Papaver somniferum HOM05D004159 ORTHO05D302046 6.8e-49 199.5 374 37.7
MD10G1043900 Malus domestica HOM05D004159 ORTHO05D036595 1.3e-36 158.7 120 60.0
Gohir.D06G181800 Gossypium hirsutum HOM05D004159 ORTHO05D021100 6.6e-36 156.4 119 63.0
Gohir.D13G037150 Gossypium hirsutum HOM05D004159 ORTHO05D021100 8.4e-31 139.4 113 61.1
Ca_31061_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 1.1e-30 139.0 172 48.3
Gorai.013G041700 Gossypium raimondii HOM05D004159 ORTHO05D005858 4.2e-30 137.1 113 59.3
HanXRQChr05g0138871 Helianthus annuus HOM05D004159 ORTHO05D005858 1.0e-28 132.5 117 59.0
Aa31sc84G60 Aethionema arabicum HOM05D004159 ORTHO05D007259 5.6e-27 126.7 221 39.8
Actinidia33332 Actinidia chinensis HOM05D004159 ORTHO05D002141 1.6e-26 125.2 80 72.5
SEGI_01298 Sequoiadendron giganteum HOM05D004159 ORTHO05D021100 8.1e-26 122.9 76 69.7
AUR62033049 Chenopodium quinoa HOM05D004159 ORTHO05D138254 1.5e-24 118.6 89 76.4
Hma1.2p1_0078F.1_g040075 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 4.4e-24 117.1 92 62.0
Hma1.2p1_0078F.1_g040060 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.3e-23 115.5 92 60.9
RcHm_v2.0_Chr5g0047691 Rosa chinensis HOM05D004159 ORTHO05D036595 8.4e-23 112.8 82 62.2
Medtr6g022610 Medicago truncatula HOM05D004159 ORTHO05D005858 9.3e-22 109.4 179 40.2
Actinidia35769 Actinidia chinensis HOM05D004159 ORTHO05D021100 2.0e-16 91.7 104 51.9
Medtr6g022550 Medicago truncatula HOM05D004159 ORTHO05D005858 6.4e-15 86.7 63 61.9
Lj2g0001382 Lotus japonicus HOM05D004159 ORTHO05D235994 2.4e-14 84.7 72 58.3
MD13G1107200 Malus domestica HOM05D004159 ORTHO05D021100 1.3e-12 79.0 60 53.3
Zm00001eb053920 Zea mays HOM05D004159 ORTHO05D021100 2.0e-08 65.1 41 73.2
Medtr6g022570 Medicago truncatula HOM05D004159 ORTHO05D005858 1.3e-07 62.4 128 34.4
Nitab4.5_0008375g0030 Nicotiana tabacum HOM05D004159 ORTHO05D285123 1.3e-07 62.4 132 33.3
Gohir.D10G229800 Gossypium hirsutum HOM05D000561 ORTHO05D000514 1.4e-06 58.9 35 80.0
VMungo0464G0208 Vigna mungo HOM05D005746 ORTHO05D007105 2.5e-06 58.2 34 79.4


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