Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62038532 Chenopodium quinoa HOM05D006697 ORTHO05D008161 1.5e-141 506.1 250 100.0
AUR62013379 Chenopodium quinoa HOM05D006697 ORTHO05D008161 5.0e-137 491.1 250 98.0
Ah.05g170350 Amaranthus hybridus HOM05D006697 ORTHO05D008161 6.4e-116 421.0 227 89.9
EL10Ac1g01267 Beta vulgaris HOM05D006697 ORTHO05D008161 1.4e-115 419.9 227 89.4
Sc23g0000070 Simmondsia chinensis HOM05D006697 ORTHO05D008161 5.2e-102 374.8 226 81.0
Aqoxy7G01951 Aquilegia oxysepala HOM05D006697 ORTHO05D008161 1.5e-101 373.2 250 73.6
GSVIVG01036291001 Vitis vinifera HOM05D006697 ORTHO05D008161 5.8e-101 371.3 221 79.2
Potri.001G377100 Populus trichocarpa HOM05D006697 ORTHO05D008161 7.5e-101 370.9 250 71.6
Hma1.2p1_0417F.1_g148910 Hydrangea macrophylla HOM05D006697 ORTHO05D008161 5.4e-99 364.8 230 75.2
Sabra16G0248400 Salix brachista HOM05D006697 ORTHO05D008161 2.7e-98 362.5 247 70.9
Dinv22109 Davidia involucrata HOM05D006697 ORTHO05D008161 1.3e-97 360.1 250 70.4
QL09p001838 Quercus lobata HOM05D006697 ORTHO05D008161 3.9e-97 358.6 249 70.3
QL11p001773 Quercus lobata HOM05D006697 ORTHO05D008161 5.1e-97 358.2 249 70.3
Atru.chr13.2506 Acer truncatum HOM05D006697 ORTHO05D008161 1.5e-96 356.7 230 73.9
TWI12G1402 Tripterygium wilfordii HOM05D006697 ORTHO05D008161 1.5e-96 356.7 250 68.0
Atru.chr13.2494 Acer truncatum HOM05D006697 ORTHO05D008161 4.3e-96 355.1 230 73.5
Actinidia03526 Actinidia chinensis HOM05D006697 ORTHO05D008161 5.6e-96 354.8 248 70.6
CsaV3_2G033200 Cucumis sativus L. HOM05D006697 ORTHO05D008161 5.6e-96 354.8 224 74.6
Hund16916 Selenicereus undatus HOM05D006697 ORTHO05D008161 5.6e-96 354.8 229 79.0
HanXRQChr08g0227531 Helianthus annuus HOM05D006697 ORTHO05D008161 7.3e-96 354.4 235 71.9
SGA_v2.0_scaffold24G10647 Striga asiatica HOM05D006697 ORTHO05D008161 1.2e-95 353.6 230 70.9
Ciclev10024137m.g Citrus clementina HOM05D006697 ORTHO05D008161 1.6e-95 353.2 221 76.0
Migut.C01379 Erythranthe guttata HOM05D006697 ORTHO05D008161 1.6e-95 353.2 245 67.8
COL.COLO4_05203 Corchorus olitorius HOM05D006697 ORTHO05D008161 2.8e-95 352.4 226 73.9
CiPaw.04G009300 Carya illinoinensis HOM05D006697 ORTHO05D008161 3.6e-95 352.1 236 72.0
Lj5C630T5 Lonicera japonica HOM05D006697 ORTHO05D008161 3.6e-95 352.1 227 73.1
Sed0014406 Sechium edule HOM05D006697 ORTHO05D008161 2.3e-94 349.4 224 73.2
Duzib213G0772 Durio zibethinus HOM05D006697 ORTHO05D008161 6.8e-94 347.8 235 71.5
MBI04_g46123_MAGBIO Magnolia biondii HOM05D006697 ORTHO05D008161 8.9e-94 347.4 225 72.9
ClCG11G008450 Citrullus lanatus HOM05D006697 ORTHO05D008161 4.4e-93 345.1 224 71.0
Thecc.08G178500 Theobroma cacao HOM05D006697 ORTHO05D008161 5.8e-93 344.7 235 71.5
Peaxi162Scf00818g00536 Petunia axillaris HOM05D006697 ORTHO05D008161 9.9e-93 344.0 225 72.4
CANSAT21G1464 Cannabis sativa HOM05D006697 ORTHO05D008161 2.2e-92 342.8 231 71.4
CANSAT21G1945 Cannabis sativa HOM05D006697 ORTHO05D008161 2.2e-92 342.8 228 71.9
Cc10_g08640 Coffea canephora HOM05D006697 ORTHO05D008161 6.4e-92 341.3 221 74.2
Lj7A235T22 Lonicera japonica HOM05D006697 ORTHO05D008161 1.4e-91 340.1 221 73.8
Sopen06g023040 Solanum pennellii HOM05D006697 ORTHO05D008161 1.4e-91 340.1 245 66.1
PGSC0003DMG400033140 Solanum tuberosum HOM05D006697 ORTHO05D008161 1.9e-91 339.7 245 66.1
Gorai.009G352800 Gossypium raimondii HOM05D006697 ORTHO05D008161 4.1e-91 338.6 250 66.0
Gohir.D05G329400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 5.4e-91 338.2 250 66.0
Glyma.11G110500 Glycine max HOM05D006697 ORTHO05D008161 2.1e-90 336.3 236 68.6
Solyc06g064560.4 Solanum lycopersicum HOM05D006697 ORTHO05D008161 2.1e-90 336.3 245 66.5
TPR.G29429 Trifolium pratense HOM05D006697 ORTHO05D008161 1.3e-89 333.6 236 66.5
Ca_26167_v3 Cicer arietinum L. HOM05D006697 ORTHO05D008161 3.9e-89 332.0 233 67.8
Psat1g020920 Pisum sativum HOM05D006697 ORTHO05D008161 3.3e-88 328.9 242 65.7
Haze_13956 Corylus avellana HOM05D006697 ORTHO05D008161 4.3e-88 328.6 235 71.5
PSO170G3180 Papaver somniferum HOM05D006697 ORTHO05D008161 4.3e-88 328.6 250 63.6
PGR044G1078 Punica granatum HOM05D006697 ORTHO05D008161 5.6e-88 328.2 225 70.7
Cpa.g.sc21.84 Carica papaya HOM05D006697 ORTHO05D008161 7.3e-88 327.8 226 68.1
vmacro17835 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 7.3e-88 327.8 236 69.9
arahy.Tifrunner.gnm1.ann1.6HI5DG Arachis hypogaea HOM05D006697 ORTHO05D008161 1.2e-87 327.0 236 67.4
FvH4_2g00851 Fragaria vesca HOM05D006697 ORTHO05D008161 1.2e-87 327.0 226 68.1
HPP92_021529 Vanilla planifolia HOM05D006697 ORTHO05D008161 1.2e-87 327.0 235 68.9
VMungo1127G1290 Vigna mungo HOM05D006697 ORTHO05D008161 1.2e-87 327.0 236 66.5
Nn8g39331 Nelumbo nucifera HOM05D006697 ORTHO05D008161 1.6e-87 326.6 250 67.2
arahy.Tifrunner.gnm1.ann1.L3LJ1W Arachis hypogaea HOM05D006697 ORTHO05D008161 2.1e-87 326.2 236 67.4
arahy.Tifrunner.gnm1.ann1.D2QDKL Arachis hypogaea HOM05D006697 ORTHO05D008161 3.6e-87 325.5 236 66.1
Lj3g0000289 Lotus japonicus HOM05D006697 ORTHO05D008161 3.6e-87 325.5 228 69.3
HPP92_021490 Vanilla planifolia HOM05D006697 ORTHO05D008161 3.6e-87 325.5 235 68.9
THA.LOC104814608 Tarenaya hassleriana HOM05D006697 ORTHO05D008161 4.7e-87 325.1 225 70.2
FAN27G1710 Fragaria x ananassa HOM05D006697 ORTHO05D008161 8.1e-87 324.3 228 67.5
Medtr2g010410 Medicago truncatula HOM05D006697 ORTHO05D008161 8.1e-87 324.3 236 66.5
Phvul.011G017400 Phaseolus vulgaris HOM05D006697 ORTHO05D008161 2.4e-86 322.8 236 65.3
CAN.G14.56 Capsicum annuum HOM05D006697 ORTHO05D008161 3.1e-86 322.4 221 70.6
Aa31LG2G660 Aethionema arabicum HOM05D006697 ORTHO05D008161 4.0e-86 322.0 257 62.6
vmacro14431 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 4.0e-86 322.0 264 63.6
MD05G1004600 Malus domestica HOM05D006697 ORTHO05D008161 8.9e-86 320.9 235 67.7
Os05g0588200 Oryza sativa ssp. japonica HOM05D006697 ORTHO05D008161 1.5e-85 320.1 224 69.6
Thhalv10008579m.g Eutrema salsugineum HOM05D006697 ORTHO05D008161 3.4e-85 318.9 250 61.6
PGR044G1872 Punica granatum HOM05D006697 ORTHO05D008161 1.3e-84 317.0 231 67.1
SalBow7G2072 Salvia bowleyana HOM05D006697 ORTHO05D008161 1.3e-84 317.0 297 56.2
RcHm_v2.0_Chr6g0251241 Rosa chinensis HOM05D006697 ORTHO05D008161 3.8e-84 315.5 228 64.9
AL1G24400 Arabidopsis lyrata HOM05D006697 ORTHO05D008161 8.4e-84 314.3 251 62.2
ECA247G0072 Erigeron canadensis HOM05D006697 ORTHO05D008161 3.2e-83 312.4 219 69.4
AT1G12790 Arabidopsis thaliana HOM05D006697 ORTHO05D008161 2.7e-82 309.3 251 62.2
Carub.0001s1251 Capsella rubella HOM05D006697 ORTHO05D008161 2.7e-82 309.3 251 61.0
CARHR013100 Cardamine hirsuta HOM05D006697 ORTHO05D008161 2.3e-81 306.2 226 65.0
Sp1g11350 Schrenkiella parvula HOM05D006697 ORTHO05D008161 2.3e-81 306.2 250 59.6
SGA_v2.0_scaffold147G36299 Striga asiatica HOM05D006697 ORTHO05D008161 4.3e-80 302.0 228 65.8
Zm00001eb345090 Zea mays HOM05D006697 ORTHO05D008161 1.6e-79 300.1 224 65.2
Manes.02G201500 Manihot esculenta HOM05D006697 ORTHO05D008161 2.8e-79 299.3 236 64.0
FAN20G2680 Fragaria x ananassa HOM05D006697 ORTHO05D008161 1.5e-77 293.5 209 66.0
Nitab4.5_0002654g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 2.6e-77 292.7 249 59.4
Prupe.8G007100 Prunus persica HOM05D006697 ORTHO05D008161 1.4e-75 287.0 227 63.9
BraA06t24084Z Brassica rapa HOM05D000776 ORTHO05D008161 2.1e-74 283.1 245 56.7
A06p08910 Brassica napus HOM05D000776 ORTHO05D008161 2.7e-74 282.7 245 56.3
TAR625G0361 Trochodendron aralioides HOM05D006697 ORTHO05D008161 6.0e-74 281.6 210 65.7
Lj7C240T16 Lonicera japonica HOM05D006697 ORTHO05D008161 3.0e-73 279.3 222 64.0
DCAR_016528 Daucus carota HOM05D006697 ORTHO05D008161 5.1e-73 278.5 196 65.8
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 1.1e-72 277.3 230 64.3
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 8.1e-71 271.2 230 63.5
Glyma.12G014500 Glycine max HOM05D006697 ORTHO05D008161 1.8e-70 270.0 186 68.8
BcaC05g25157 Brassica carinata HOM05D000776 ORTHO05D008161 5.3e-70 268.5 236 57.2
C05p10520 Brassica napus HOM05D000776 ORTHO05D008161 5.3e-70 268.5 236 57.2
Rhsim08G0116200 Rhododendron simsii HOM05D006697 ORTHO05D008161 9.0e-70 267.7 271 55.0
BolC5t29798H Brassica oleracea HOM05D000776 ORTHO05D008161 1.3e-68 263.8 240 56.7
BcaC05g25114 Brassica carinata HOM05D006697 ORTHO05D008161 1.1e-67 260.8 227 58.1
MD05G1003900 Malus domestica HOM05D006697 ORTHO05D008161 1.9e-67 260.0 192 65.1
CAN.G27.3 Capsicum annuum HOM05D006697 ORTHO05D008161 2.4e-67 259.6 197 64.0
SHI16724 Sapria himalayana HOM05D006697 ORTHO05D008161 3.2e-67 259.2 282 52.5
Nitab4.5_0010319g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 2.7e-66 256.1 239 56.1
ATR0083G058 Amborella trichopoda HOM05D006697 ORTHO05D008161 2.0e-61 240.0 183 63.4
Eucgr.F04072 Eucalyptus grandis HOM05D006697 ORTHO05D008161 3.5e-58 229.2 159 71.7
Lsat_1_v5_gn_1_24901 Lactuca sativa HOM05D006697 ORTHO05D008161 8.7e-57 224.6 152 67.8
MELO3C029791.2 Cucumis melo HOM05D006697 ORTHO05D008161 7.4e-56 221.5 165 70.9
Gohir.A05G328400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 1.6e-55 220.3 174 60.3
arahy.Tifrunner.gnm1.ann1.3DZ399 Arachis hypogaea HOM05D006697 ORTHO05D008161 1.1e-54 217.6 236 53.0
arahy.Tifrunner.gnm1.ann1.9U8FPX Arachis hypogaea HOM05D006697 ORTHO05D008161 9.0e-54 214.5 218 55.0
Lalb_Chr01g0000751 Lupinus albus HOM05D006697 ORTHO05D008161 1.1e-51 207.6 151 62.3
MSTRG.1598 Avicennia marina HOM05D006697 ORTHO05D008161 1.9e-48 196.8 121 76.0
unitig_32.g11211 Utricularia gibba HOM05D006697 ORTHO05D008161 1.4e-46 190.7 133 68.4
unitig_32.g11220 Utricularia gibba HOM05D000486 ORTHO05D000375 2.4e-46 189.9 170 57.1
arahy.Tifrunner.gnm1.ann1.K2UT7U Arachis hypogaea HOM05D006697 ORTHO05D008161 4.6e-42 175.6 119 72.3
arahy.Tifrunner.gnm1.ann1.GZG3VH Arachis hypogaea HOM05D006697 ORTHO05D008161 5.0e-36 155.6 149 55.7
SMO119G0513 Selaginella moellendorffii HOM05D006697 ORTHO05D008161 1.9e-35 153.7 218 37.6
AL1G24230 Arabidopsis lyrata HOM05D006697 ORTHO05D008161 4.7e-34 149.1 130 57.7
Mapoly0068s0032 Marchantia polymorpha HOM05D006697 ORTHO05D008161 5.9e-29 132.1 225 32.9
Lalb_Chr01g0000761 Lupinus albus HOM05D006697 ORTHO05D008161 6.3e-23 112.1 82 64.6
RcHm_v2.0_Chr6g0275321 Rosa chinensis HOM05D006697 ORTHO05D008161 1.2e-21 107.8 95 52.6
arahy.Tifrunner.gnm1.ann1.D8HQTE Arachis hypogaea HOM05D006697 ORTHO05D008161 3.4e-16 89.7 65 61.5
Medtr2g451120 Medicago truncatula HOM05D006697 ORTHO05D008161 6.5e-12 75.5 90 48.9
Lj7A241T18 Lonicera japonica HOM05D006697 ORTHO05D008161 1.0e-09 68.2 43 67.4


User provided reference genes

Program Settings