Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62037131 Chenopodium quinoa HOM05D002235 ORTHO05D006252 1.1e-53 213.0 107 100.0
AUR62025126 Chenopodium quinoa HOM05D002235 ORTHO05D006252 8.3e-49 196.8 101 96.0
EL10Ac9g20979 Beta vulgaris HOM05D002235 ORTHO05D006252 1.5e-45 186.0 101 89.1
Ah.01g005000 Amaranthus hybridus HOM05D002235 ORTHO05D006252 1.1e-40 169.9 101 77.2
Dinv05442 Davidia involucrata HOM05D002235 ORTHO05D006252 1.1e-35 153.3 102 74.5
TWI36G0046 Tripterygium wilfordii HOM05D002235 ORTHO05D006252 1.1e-35 153.3 101 77.2
Lj8A125T69 Lonicera japonica HOM05D002235 ORTHO05D006252 9.0e-35 150.2 102 71.6
Hund22246 Selenicereus undatus HOM05D002235 ORTHO05D006252 1.5e-34 149.4 101 72.3
TWI18G1280 Tripterygium wilfordii HOM05D002235 ORTHO05D006252 1.5e-34 149.4 100 76.0
Lalb_Chr01g0009331 Lupinus albus HOM05D002235 ORTHO05D006252 2.6e-34 148.7 102 70.6
Lalb_Chr03g0034571 Lupinus albus HOM05D002235 ORTHO05D006252 2.6e-34 148.7 102 70.6
Nitab4.5_0010082g0050 Nicotiana tabacum HOM05D002235 ORTHO05D006252 7.6e-34 147.1 88 81.8
CSS0042137 Camellia sinensis var. sinensis HOM05D002235 ORTHO05D006252 1.3e-33 146.4 102 71.6
CANSAT64G1242 Cannabis sativa HOM05D002235 ORTHO05D006252 1.3e-33 146.4 102 69.6
CiPaw.03G160500 Carya illinoinensis HOM05D002235 ORTHO05D006252 1.3e-33 146.4 102 70.6
Gohir.D13G088300 Gossypium hirsutum HOM05D002235 ORTHO05D006252 1.3e-33 146.4 102 67.6
CAN.G575.51 Capsicum annuum HOM05D002235 ORTHO05D006252 1.7e-33 146.0 88 79.5
Glyma.16G189100 Glycine max HOM05D002235 ORTHO05D006252 1.7e-33 146.0 103 70.9
TAR626G0760 Trochodendron aralioides HOM05D002235 ORTHO05D006252 1.7e-33 146.0 102 70.6
AT1G05190 Arabidopsis thaliana HOM05D002235 ORTHO05D006252 2.2e-33 145.6 101 70.3
Carub.0001s0446 Capsella rubella HOM05D002235 ORTHO05D006252 2.2e-33 145.6 101 70.3
Gorai.013G101000 Gossypium raimondii HOM05D002235 ORTHO05D006252 2.2e-33 145.6 102 67.6
Nitab4.5_0001925g0020 Nicotiana tabacum HOM05D002235 ORTHO05D006252 2.2e-33 145.6 88 80.7
Peaxi162Scf00062g01418 Petunia axillaris HOM05D002235 ORTHO05D006252 2.2e-33 145.6 88 80.7
Hma1.2p1_1748F.1_g300670 Hydrangea macrophylla HOM05D002235 ORTHO05D006252 2.9e-33 145.2 102 71.6
Potri.014G153000 Populus trichocarpa HOM05D002235 ORTHO05D006252 2.9e-33 145.2 102 69.6
Thhalv10008693m.g Eutrema salsugineum HOM05D002235 ORTHO05D006252 3.8e-33 144.8 102 68.6
PGSC0003DMG401023851 Solanum tuberosum HOM05D002235 ORTHO05D006252 3.8e-33 144.8 88 79.5
BcaC07g42148 Brassica carinata HOM05D002235 ORTHO05D006252 4.9e-33 144.4 101 69.3
C08p51940 Brassica napus HOM05D002235 ORTHO05D006252 4.9e-33 144.4 101 69.3
Aa31LG1G19560 Aethionema arabicum HOM05D002235 ORTHO05D006252 6.4e-33 144.1 102 70.6
Duzib251G0293 Durio zibethinus HOM05D002235 ORTHO05D006252 6.4e-33 144.1 102 70.6
Gohir.A13G094300 Gossypium hirsutum HOM05D002235 ORTHO05D006252 6.4e-33 144.1 102 66.7
Sabra14G0115900 Salix brachista HOM05D002235 ORTHO05D006252 6.4e-33 144.1 102 69.6
VMungo0464G0253 Vigna mungo HOM05D002235 ORTHO05D006252 6.4e-33 144.1 103 69.9
GSVIVG01030599001 Vitis vinifera HOM05D002235 ORTHO05D006252 8.4e-33 143.7 102 69.6
AL1G14950 Arabidopsis lyrata HOM05D002235 ORTHO05D006252 1.1e-32 143.3 101 69.3
Solyc12g100160.3 Solanum lycopersicum HOM05D002235 ORTHO05D006252 1.1e-32 143.3 88 78.4
Sopen12g034790 Solanum pennellii HOM05D002235 ORTHO05D006252 1.1e-32 143.3 88 78.4
BraA09t42090Z Brassica rapa HOM05D002235 ORTHO05D006252 1.4e-32 142.9 102 68.6
Atru.chr6.3175 Acer truncatum HOM05D002235 ORTHO05D006252 1.9e-32 142.5 102 66.7
Actinidia09712 Actinidia chinensis HOM05D002235 ORTHO05D006252 1.9e-32 142.5 88 78.4
BolC8t52725H Brassica oleracea HOM05D002235 ORTHO05D006252 2.4e-32 142.1 102 68.6
Cpa.g.sc8.216 Carica papaya HOM05D002235 ORTHO05D006252 2.4e-32 142.1 99 71.7
MBI02_g28342_MAGBIO Magnolia biondii HOM05D002235 ORTHO05D006252 2.4e-32 142.1 103 68.9
Sc06g0009540 Simmondsia chinensis HOM05D002235 ORTHO05D006252 2.4e-32 142.1 102 68.6
C05p03420 Brassica napus HOM05D002235 ORTHO05D006252 3.2e-32 141.7 101 67.3
BolC5t29121H Brassica oleracea HOM05D002235 ORTHO05D006252 3.2e-32 141.7 101 67.3
RcHm_v2.0_Chr2g0159551 Rosa chinensis HOM05D002235 ORTHO05D006252 3.2e-32 141.7 102 67.6
THA.LOC104826153 Tarenaya hassleriana HOM05D002235 ORTHO05D006252 3.2e-32 141.7 101 67.3
Ciclev10016578m.g Citrus clementina HOM05D002235 ORTHO05D006252 4.2e-32 141.4 102 70.6
COL.COLO4_27703 Corchorus olitorius HOM05D002235 ORTHO05D006252 4.2e-32 141.4 102 67.6
Prupe.1G100300 Prunus persica HOM05D002235 ORTHO05D006252 4.2e-32 141.4 102 66.7
Sp1g04040 Schrenkiella parvula HOM05D002235 ORTHO05D006252 4.2e-32 141.4 101 66.3
SpUn0024_0100 Schrenkiella parvula HOM05D002235 ORTHO05D006252 4.2e-32 141.4 101 66.3
Sed0014516 Sechium edule HOM05D002235 ORTHO05D006252 4.2e-32 141.4 101 68.3
Thecc.02G313800 Theobroma cacao HOM05D002235 ORTHO05D006252 4.2e-32 141.4 102 67.6
Phvul.004G116200 Phaseolus vulgaris HOM05D002235 ORTHO05D006252 5.4e-32 141.0 103 68.9
PGR042G1696 Punica granatum HOM05D002235 ORTHO05D006252 5.4e-32 141.0 88 75.0
A09p67570 Brassica napus HOM05D002235 ORTHO05D006252 7.1e-32 140.6 102 67.6
A10p03720 Brassica napus HOM05D002235 ORTHO05D006252 7.1e-32 140.6 101 67.3
BraA10t42645Z Brassica rapa HOM05D002235 ORTHO05D006252 7.1e-32 140.6 101 67.3
Glyma.09G138400 Glycine max HOM05D002235 ORTHO05D006252 7.1e-32 140.6 88 73.9
MBI02_g15249_MAGBIO Magnolia biondii HOM05D002235 ORTHO05D006252 7.1e-32 140.6 103 68.9
Nn3g19321 Nelumbo nucifera HOM05D002235 ORTHO05D006252 7.1e-32 140.6 103 72.8
TPR.G8169 Trifolium pratense HOM05D002235 ORTHO05D006252 7.1e-32 140.6 101 67.3
Eucgr.A01711 Eucalyptus grandis HOM05D002235 ORTHO05D006252 9.3e-32 140.2 88 76.1
Ca_27441_v3 Cicer arietinum L. HOM05D002235 ORTHO05D006252 1.6e-31 139.4 101 66.3
Migut.H00629 Erythranthe guttata HOM05D002235 ORTHO05D006252 1.6e-31 139.4 102 66.7
MD09G1108400 Malus domestica HOM05D002235 ORTHO05D006252 1.6e-31 139.4 102 66.7
MELO3C018813.2 Cucumis melo HOM05D002235 ORTHO05D006252 2.1e-31 139.0 101 66.3
arahy.Tifrunner.gnm1.ann1.9LRG3U Arachis hypogaea HOM05D002235 ORTHO05D006252 2.7e-31 138.7 102 68.6
Psat1g066560 Pisum sativum HOM05D002235 ORTHO05D006252 2.7e-31 138.7 103 67.0
TAR624G1336 Trochodendron aralioides HOM05D002235 ORTHO05D006252 2.7e-31 138.7 102 69.6
FAN02G2679 Fragaria x ananassa HOM05D002235 ORTHO05D006252 3.5e-31 138.3 102 66.7
FvH4_6g43280 Fragaria vesca HOM05D002235 ORTHO05D006252 4.6e-31 137.9 102 66.7
FAN05G0628 Fragaria x ananassa HOM05D002235 ORTHO05D006252 4.6e-31 137.9 102 66.7
FAN14G5807 Fragaria x ananassa HOM05D002235 ORTHO05D006252 4.6e-31 137.9 102 66.7
ClCG02G001880 Citrullus lanatus HOM05D002235 ORTHO05D006252 6.0e-31 137.5 101 64.4
arahy.Tifrunner.gnm1.ann1.BMD0WJ Arachis hypogaea HOM05D002235 ORTHO05D006252 7.8e-31 137.1 102 67.6
HanXRQChr10g0305801 Helianthus annuus HOM05D002235 ORTHO05D006252 7.8e-31 137.1 100 68.0
Lj2g0022309 Lotus japonicus HOM05D002235 ORTHO05D006252 1.0e-30 136.7 103 67.0
QL07p005233 Quercus lobata HOM05D002235 ORTHO05D006252 1.0e-30 136.7 102 67.6
Cfa014413 Carpinus fangiana HOM05D002235 ORTHO05D006252 1.3e-30 136.3 102 68.6
ECA234G2016 Erigeron canadensis HOM05D002235 ORTHO05D006252 1.3e-30 136.3 100 67.0
THA.LOC104800989 Tarenaya hassleriana HOM05D002235 ORTHO05D006252 1.3e-30 136.3 101 69.3
CsaV3_7G003660 Cucumis sativus L. HOM05D002235 ORTHO05D006252 2.3e-30 135.6 101 64.4
MD17G1096300 Malus domestica HOM05D002235 ORTHO05D006252 2.3e-30 135.6 101 66.3
DCAR_019767 Daucus carota HOM05D002235 ORTHO05D006252 3.0e-30 135.2 88 73.9
Aqoxy1G03636 Aquilegia oxysepala HOM05D002235 ORTHO05D006252 3.9e-30 134.8 103 69.9
Haze_12873 Corylus avellana HOM05D002235 ORTHO05D006252 3.9e-30 134.8 102 67.6
CARHR004660 Cardamine hirsuta HOM05D002235 ORTHO05D006252 6.6e-30 134.0 103 64.1
Sed0015264 Sechium edule HOM05D002235 ORTHO05D006252 8.7e-30 133.7 101 63.4
Rhsim06G0161200 Rhododendron simsii HOM05D002235 ORTHO05D006252 1.5e-29 132.9 102 62.7
Lsat_1_v5_gn_5_125300 Lactuca sativa HOM05D002235 ORTHO05D006252 1.9e-29 132.5 100 65.0
ATR0752G019 Amborella trichopoda HOM05D002235 ORTHO05D006252 4.3e-29 131.3 102 64.7
Manes.12G075000 Manihot esculenta HOM05D002235 ORTHO05D006252 4.3e-29 131.3 84 73.8
SGA_v2.0_scaffold52G19164 Striga asiatica HOM05D002235 ORTHO05D006252 4.3e-29 131.3 88 69.3
Nn1g01949 Nelumbo nucifera HOM05D002235 ORTHO05D006252 5.6e-29 131.0 102 65.7
CDE05G1249 Ceratophyllum demersum HOM05D002235 ORTHO05D006252 9.6e-29 130.2 102 60.8
PSO832G4463 Papaver somniferum HOM05D002235 ORTHO05D006252 1.3e-28 129.8 101 65.3
PSO210G1973 Papaver somniferum HOM05D002235 ORTHO05D006252 2.1e-28 129.0 101 65.3
vmacro12207 Vaccinium macrocarpon HOM05D002235 ORTHO05D006252 6.2e-28 127.5 102 59.8
MSTRG.23886 Avicennia marina HOM05D002235 ORTHO05D006252 5.3e-27 124.4 86 68.6
BcaC03g14225 Brassica carinata HOM05D002235 ORTHO05D006252 1.2e-26 123.2 103 60.2
unitig_62.g23382 Utricularia gibba HOM05D002235 ORTHO05D006252 1.2e-26 123.2 102 65.7
Os03g0751400 Oryza sativa ssp. japonica HOM05D002235 ORTHO05D006252 2.0e-26 122.5 86 67.4
Potri.002G229325 Populus trichocarpa HOM05D002235 ORTHO05D006252 2.0e-26 122.5 102 60.8
BcaB05g22264 Brassica carinata HOM05D002235 ORTHO05D006252 3.4e-26 121.7 88 64.8
CDE05G1755 Ceratophyllum demersum HOM05D002235 ORTHO05D006252 3.4e-26 121.7 102 57.8
BolC2t07645H Brassica oleracea HOM05D002235 ORTHO05D006252 4.5e-26 121.3 88 65.9
Os03g0356300 Oryza sativa ssp. japonica HOM05D002235 ORTHO05D006252 7.6e-26 120.6 86 67.4
Cc03_g16290 Coffea canephora HOM05D002235 ORTHO05D006252 1.3e-25 119.8 103 60.2
HPP92_004133 Vanilla planifolia HOM05D002235 ORTHO05D006252 1.3e-25 119.8 103 56.3
arahy.Tifrunner.gnm1.ann1.R9SY1C Arachis hypogaea HOM05D002235 ORTHO05D006252 6.4e-25 117.5 102 62.7
Zm00001eb394520 Zea mays HOM05D002235 ORTHO05D006252 5.4e-24 114.4 85 64.7
SEGI_26152 Sequoiadendron giganteum HOM05D002235 ORTHO05D006252 7.1e-24 114.0 103 55.3
Zm00001eb017180 Zea mays HOM05D002235 ORTHO05D006252 2.7e-23 112.1 82 67.1
CSS0044404 Camellia sinensis var. sinensis HOM05D002235 ORTHO05D006252 4.3e-21 104.8 80 63.8
Mapoly0005s0245 Marchantia polymorpha HOM05D002235 ORTHO05D006252 1.6e-20 102.8 74 64.9
AagrBONN_evm.TU.Sc2ySwM_368.1692 Anthoceros agrestis HOM05D002235 ORTHO05D006252 8.1e-20 100.5 74 62.2
SMO169G0123 Selaginella moellendorffii HOM05D002235 ORTHO05D006252 2.0e-18 95.9 74 62.2
SalBow1G4279 Salvia bowleyana HOM05D002235 ORTHO05D006252 9.9e-18 93.6 70 64.3
CARHR004650 Cardamine hirsuta HOM05D002235 ORTHO05D006252 2.2e-17 92.4 80 60.0
Pp3s128_40 Physcomitrium patens HOM05D002235 ORTHO05D006252 1.6e-15 86.3 104 49.0
Medtr0316s0010 Medicago truncatula HOM05D002235 ORTHO05D006252 1.3e-14 83.2 52 76.9
C02p15280 Brassica napus HOM05D002235 ORTHO05D006252 6.7e-14 80.9 49 77.6
CBR_g40529 Chara braunii HOM05D002235 ORTHO05D006252 8.7e-14 80.5 74 55.4
BraA02t05980Z Brassica rapa HOM05D002235 ORTHO05D006252 5.6e-13 77.8 49 75.5
vmacro20205 Vaccinium macrocarpon HOM05D002235 ORTHO05D006252 9.6e-13 77.0 56 58.9
Lsat_1_v5_gn_5_33001 Lactuca sativa HOM05D002235 ORTHO05D006252 1.8e-11 72.8 63 57.1
Migut.A00837 Erythranthe guttata HOM05D000943 ORTHO05D007752 3.1e-11 72.0 99 40.4
MCO03G488 Micromonas commoda HOM05D002235 ORTHO05D006252 4.2e-08 61.6 74 40.5
PRCOL_00003594 Prasinoderma coloniale HOM05D002235 ORTHO05D006252 4.2e-08 61.6 77 40.3
HanXRQChr15g0479751 Helianthus annuus HOM05D002235 ORTHO05D225803 1.6e-07 59.7 52 59.6
Cre09.g415950 Chlamydomonas reinhardtii HOM05D002235 ORTHO05D006252 3.5e-07 58.5 75 45.3
Haze_27389 Corylus avellana HOM05D002235 ORTHO05D006252 5.1e-06 54.7 69 39.1


User provided reference genes

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