Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62032907 Chenopodium quinoa HOM05D005979 ORTHO05D007848 1.3e-168 596.3 286 100.0
AUR62029060 Chenopodium quinoa HOM05D005979 ORTHO05D007848 2.8e-83 312.8 210 75.7
AUR62033954 Chenopodium quinoa HOM05D005979 ORTHO05D007848 7.6e-81 304.7 248 64.9
EL10Ac8g19200 Beta vulgaris HOM05D005979 ORTHO05D007848 2.4e-74 283.1 330 48.8
Ah.09g228190 Amaranthus hybridus HOM05D005979 ORTHO05D007848 6.9e-74 281.6 250 57.6
Hund26899 Selenicereus undatus HOM05D005979 ORTHO05D007848 1.3e-72 277.3 306 49.7
Sc18g0002150 Simmondsia chinensis HOM05D005979 ORTHO05D007848 2.0e-65 253.4 251 52.6
Dinv35473 Davidia involucrata HOM05D005979 ORTHO05D007848 4.2e-63 245.7 250 51.6
Hma1.2p1_0075F.1_g039230 Hydrangea macrophylla HOM05D005979 ORTHO05D007848 5.5e-63 245.4 250 51.2
Actinidia40001 Actinidia chinensis HOM05D005979 ORTHO05D007848 7.9e-62 241.5 249 52.2
TAR633G0311 Trochodendron aralioides HOM05D005979 ORTHO05D007848 3.0e-61 239.6 250 49.2
CSS0035132 Camellia sinensis var. sinensis HOM05D005979 ORTHO05D007848 1.1e-60 237.7 250 50.8
CiPaw.09G046000 Carya illinoinensis HOM05D005979 ORTHO05D007848 1.1e-60 237.7 249 49.0
TWI77G1019 Tripterygium wilfordii HOM05D005979 ORTHO05D007848 1.5e-60 237.3 249 49.0
QL07p008776 Quercus lobata HOM05D005979 ORTHO05D007848 2.5e-60 236.5 253 47.8
SalBow6G2287 Salvia bowleyana HOM05D005979 ORTHO05D007848 2.5e-60 236.5 251 50.2
Cpa.g.sc5.208 Carica papaya HOM05D005979 ORTHO05D007848 9.6e-60 234.6 250 49.2
RcHm_v2.0_Chr4g0414381 Rosa chinensis HOM05D005979 ORTHO05D007848 3.7e-59 232.6 251 48.6
Manes.09G007200 Manihot esculenta HOM05D005979 ORTHO05D007848 4.8e-59 232.3 250 48.4
THA.LOC104823212 Tarenaya hassleriana HOM05D005979 ORTHO05D007848 4.8e-59 232.3 250 47.6
Nn7g36654 Nelumbo nucifera HOM05D005979 ORTHO05D007848 8.2e-59 231.5 250 48.4
Oeu013750.3 Olea europaea HOM05D005979 ORTHO05D007848 8.2e-59 231.5 254 49.6
HanXRQChr05g0144951 Helianthus annuus HOM05D005979 ORTHO05D007848 1.1e-58 231.1 250 48.0
Lalb_Chr02g0156521 Lupinus albus HOM05D005979 ORTHO05D007848 1.1e-58 231.1 251 48.2
AL3G21560 Arabidopsis lyrata HOM05D005979 ORTHO05D007848 1.4e-58 230.7 250 48.0
MELO3C019044.2 Cucumis melo HOM05D005979 ORTHO05D007848 1.4e-58 230.7 249 48.6
FvH4_4g13730 Fragaria vesca HOM05D005979 ORTHO05D007848 1.4e-58 230.7 251 48.6
FAN12G2831 Fragaria x ananassa HOM05D005979 ORTHO05D007848 1.4e-58 230.7 251 48.6
CsaV3_4G027840 Cucumis sativus L. HOM05D005979 ORTHO05D007848 1.8e-58 230.3 249 48.6
MD04G1012500 Malus domestica HOM05D005979 ORTHO05D007848 1.8e-58 230.3 248 47.6
ClCG09G016040 Citrullus lanatus HOM05D005979 ORTHO05D007848 2.4e-58 229.9 248 48.8
FAN17G0168 Fragaria x ananassa HOM05D005979 ORTHO05D007848 2.4e-58 229.9 251 48.6
GSVIVG01033606001 Vitis vinifera HOM05D005979 ORTHO05D007848 3.1e-58 229.6 250 48.0
Gorai.013G116500 Gossypium raimondii HOM05D005979 ORTHO05D007848 5.3e-58 228.8 250 47.6
RcHm_v2.0_Chr6g0280571 Rosa chinensis HOM05D005979 ORTHO05D007848 5.3e-58 228.8 251 47.0
Cc02_g19250 Coffea canephora HOM05D005979 ORTHO05D007848 6.9e-58 228.4 247 47.4
Lj5g0020498 Lotus japonicus HOM05D005979 ORTHO05D007848 6.9e-58 228.4 251 47.0
Thecc.05G139000 Theobroma cacao HOM05D005979 ORTHO05D007848 6.9e-58 228.4 250 47.6
Carub.0003s0939 Capsella rubella HOM05D005979 ORTHO05D007848 1.2e-57 227.6 250 47.2
Ciclev10021922m.g Citrus clementina HOM05D005979 ORTHO05D007848 1.2e-57 227.6 248 47.6
AT3G10220 Arabidopsis thaliana HOM05D005979 ORTHO05D007848 1.5e-57 227.3 250 47.2
Gohir.D13G103900 Gossypium hirsutum HOM05D005979 ORTHO05D007848 1.5e-57 227.3 250 47.6
Prupe.7G257800 Prunus persica HOM05D005979 ORTHO05D007848 2.0e-57 226.9 251 47.4
Duzib093G1926 Durio zibethinus HOM05D005979 ORTHO05D007848 2.6e-57 226.5 249 47.8
Cfa016688 Carpinus fangiana HOM05D005979 ORTHO05D007848 3.4e-57 226.1 249 47.0
Thhalv10021412m.g Eutrema salsugineum HOM05D005979 ORTHO05D007848 3.4e-57 226.1 250 47.2
Sopen03g028870 Solanum pennellii HOM05D005979 ORTHO05D007848 3.4e-57 226.1 251 47.0
BcaB04g21222 Brassica carinata HOM05D005979 ORTHO05D007848 5.9e-57 225.3 250 46.8
Gohir.A13G100300 Gossypium hirsutum HOM05D005979 ORTHO05D007848 7.6e-57 224.9 250 47.2
MBI09_g07121_MAGBIO Magnolia biondii HOM05D005979 ORTHO05D007848 7.6e-57 224.9 250 47.2
CAN.G637.20 Capsicum annuum HOM05D005979 ORTHO05D007848 1.0e-56 224.6 250 46.0
vmacro19992 Vaccinium macrocarpon HOM05D005979 ORTHO05D007848 1.3e-56 224.2 281 43.8
Atru.chr1.1490 Acer truncatum HOM05D005979 ORTHO05D007848 1.7e-56 223.8 248 47.2
Migut.B00389 Erythranthe guttata HOM05D005979 ORTHO05D007848 2.2e-56 223.4 250 46.0
Sed0017937 Sechium edule HOM05D005979 ORTHO05D007848 2.2e-56 223.4 248 47.6
Solyc03g098170.3 Solanum lycopersicum HOM05D005979 ORTHO05D007848 2.2e-56 223.4 251 46.6
BolC5t34447H Brassica oleracea HOM05D005979 ORTHO05D007848 3.8e-56 222.6 250 46.8
Aa31LG3G2790 Aethionema arabicum HOM05D005979 ORTHO05D007848 5.0e-56 222.2 250 44.8
COL.COLO4_00190 Corchorus olitorius HOM05D005979 ORTHO05D007848 5.0e-56 222.2 251 46.2
Sp3g08500 Schrenkiella parvula HOM05D005979 ORTHO05D007848 6.5e-56 221.9 250 46.0
PGSC0003DMG400031053 Solanum tuberosum HOM05D005979 ORTHO05D007848 6.5e-56 221.9 251 46.6
ECA232G1805 Erigeron canadensis HOM05D005979 ORTHO05D007848 8.5e-56 221.5 249 46.2
Medtr1g051215 Medicago truncatula HOM05D005979 ORTHO05D007848 8.5e-56 221.5 251 47.0
unitig_0.g99 Utricularia gibba HOM05D005979 ORTHO05D007848 8.5e-56 221.5 250 45.6
Potri.006G041400 Populus trichocarpa HOM05D005979 ORTHO05D007848 1.1e-55 221.1 249 45.0
Psat6g123280 Pisum sativum HOM05D005979 ORTHO05D007848 1.4e-55 220.7 251 47.8
C05p57920 Brassica napus HOM05D005979 ORTHO05D007848 3.2e-55 219.5 251 47.0
Gohir.D04G132100 Gossypium hirsutum HOM05D005979 ORTHO05D007848 3.2e-55 219.5 250 45.6
CARHR084710 Cardamine hirsuta HOM05D005979 ORTHO05D007848 4.2e-55 219.2 250 45.2
BraA05t22680Z Brassica rapa HOM05D005979 ORTHO05D007848 5.5e-55 218.8 251 46.2
DCAR_001099 Daucus carota HOM05D005979 ORTHO05D007848 5.5e-55 218.8 249 45.4
HPP92_006880 Vanilla planifolia HOM05D005979 ORTHO05D007848 5.5e-55 218.8 250 46.0
BcaNung05525 Brassica carinata HOM05D005979 ORTHO05D007848 7.2e-55 218.4 251 46.2
CANSAT64G2596 Cannabis sativa HOM05D005979 ORTHO05D007848 9.3e-55 218.0 246 47.2
Medtr0004s0600 Medicago truncatula HOM05D005979 ORTHO05D007848 9.3e-55 218.0 251 46.6
Phvul.002G285700 Phaseolus vulgaris HOM05D005979 ORTHO05D007848 9.3e-55 218.0 253 44.7
TPR.G19644 Trifolium pratense HOM05D005979 ORTHO05D007848 1.6e-54 217.2 251 46.2
Rhsim05G0172800 Rhododendron simsii HOM05D005979 ORTHO05D007848 3.6e-54 216.1 302 40.1
Aqoxy2G00350 Aquilegia oxysepala HOM05D005979 ORTHO05D007848 4.6e-54 215.7 249 45.4
A05p38880 Brassica napus HOM05D005979 ORTHO05D007848 6.1e-54 215.3 251 45.4
Ca_23806_v3 Cicer arietinum L. HOM05D005979 ORTHO05D007848 6.1e-54 215.3 251 45.0
HPP92_006862 Vanilla planifolia HOM05D005979 ORTHO05D007848 6.1e-54 215.3 250 45.6
Eucgr.K01638 Eucalyptus grandis HOM05D005979 ORTHO05D007848 7.9e-54 214.9 244 43.9
SGA_v2.0_scaffold32G13036 Striga asiatica HOM05D005979 ORTHO05D007848 1.0e-53 214.5 282 42.9
Lsat_1_v5_gn_0_460 Lactuca sativa HOM05D005979 ORTHO05D007848 3.0e-53 213.0 250 45.2
CDE08G1123 Ceratophyllum demersum HOM05D005979 ORTHO05D007848 5.1e-53 212.2 250 44.4
VMungo0251G0166 Vigna mungo HOM05D005979 ORTHO05D007848 1.5e-52 210.7 253 44.3
Glyma.05G203800 Glycine max HOM05D005979 ORTHO05D007848 1.9e-52 210.3 251 44.6
CDE06G1795 Ceratophyllum demersum HOM05D005979 ORTHO05D007848 1.3e-51 207.6 249 43.8
COL.COLO4_36506 Corchorus olitorius HOM05D005979 ORTHO05D007848 2.8e-51 206.5 241 45.2
Prupe.1G158700 Prunus persica HOM05D005979 ORTHO05D007848 2.8e-51 206.5 242 45.9
Gorai.012G115900 Gossypium raimondii HOM05D005979 ORTHO05D007848 9.0e-50 201.4 242 43.8
ATR1134G092 Amborella trichopoda HOM05D005979 ORTHO05D007848 1.5e-49 200.7 249 44.6
arahy.Tifrunner.gnm1.ann1.Y5SS6T Arachis hypogaea HOM05D005979 ORTHO05D007848 1.3e-48 197.6 231 46.8
Lj2A41G64 Lonicera japonica HOM05D005979 ORTHO05D007848 1.3e-48 197.6 233 46.8
Nitab4.5_0001180g0050 Nicotiana tabacum HOM05D005979 ORTHO05D007848 6.5e-48 195.3 281 42.3
Haze_19714 Corylus avellana HOM05D005979 ORTHO05D007848 2.6e-44 183.3 222 43.2
PSO170G5780 Papaver somniferum HOM05D005979 ORTHO05D007848 3.3e-44 183.0 220 43.6
Nitab4.5_0003715g0020 Nicotiana tabacum HOM05D005979 ORTHO05D007848 9.1e-42 174.9 210 46.7
Os04g0692100 Oryza sativa ssp. japonica HOM05D005979 ORTHO05D007848 2.0e-41 173.7 251 39.4
Zm00001eb076570 Zea mays HOM05D005979 ORTHO05D007848 9.4e-39 164.9 251 41.0
Mapoly0016s0206 Marchantia polymorpha HOM05D005979 ORTHO05D007848 2.0e-36 157.1 228 42.1
Peaxi162Scf00171g00620 Petunia axillaris HOM05D005979 ORTHO05D007848 2.0e-33 147.1 174 44.8
AagrBONN_evm.TU.Sc2ySwM_228.4763 Anthoceros agrestis HOM05D005979 ORTHO05D007848 4.5e-33 146.0 300 32.3
Pp3c13_18250 Physcomitrium patens HOM05D005979 ORTHO05D007848 6.5e-32 142.1 230 38.7
Nitab4.5_0005200g0020 Nicotiana tabacum HOM05D005979 ORTHO05D007848 5.7e-28 129.0 81 72.8
COL.COLO4_00246 Corchorus olitorius HOM05D005979 ORTHO05D007848 2.0e-25 120.6 82 67.1
Cre15.g636300 Chlamydomonas reinhardtii HOM05D005979 ORTHO05D007848 2.7e-25 120.2 221 34.8
CBR_g30186 Chara braunii HOM05D005979 ORTHO05D007848 5.9e-25 119.0 223 33.6
Gohir.A04G092832 Gossypium hirsutum HOM05D005979 ORTHO05D007848 7.2e-23 112.1 81 63.0
Sabra06G0028100 Salix brachista HOM05D005979 ORTHO05D007848 2.7e-22 110.2 116 45.7
FAN03G2583 Fragaria x ananassa HOM05D005979 ORTHO05D007848 5.2e-21 105.9 80 62.5
FAN08G3312 Fragaria x ananassa HOM05D005979 ORTHO05D007848 5.2e-21 105.9 80 62.5
Nitab4.5_0005200g0030 Nicotiana tabacum HOM05D005979 ORTHO05D007848 6.8e-21 105.5 91 51.6
PRCOL_00000740 Prasinoderma coloniale HOM05D005979 ORTHO05D007848 1.3e-19 101.3 220 34.1
MCO14G471 Micromonas commoda HOM05D005979 ORTHO05D007848 2.8e-19 100.1 235 29.4
FAN25G1846 Fragaria x ananassa HOM05D005979 ORTHO05D007848 1.8e-18 97.4 72 63.9
BcaC09g48108 Brassica carinata HOM05D005979 ORTHO05D007848 1.3e-16 91.3 126 38.1
SEGI_39367 Sequoiadendron giganteum HOM05D005979 ORTHO05D007848 4.2e-15 86.3 46 73.9
BraA01t04540Z Brassica rapa HOM05D005979 ORTHO05D007848 9.8e-12 75.1 51 60.8
A01p41070 Brassica napus HOM05D005979 ORTHO05D007848 4.9e-11 72.8 51 58.8
BNapus_Darmor_BZH_scaffold_78p00640 Brassica napus HOM05D005979 ORTHO05D007848 4.9e-11 72.8 51 58.8
Glyma.08G011202 Glycine max HOM05D005979 ORTHO05D007848 7.0e-10 68.9 110 35.5
BolC1t05773H Brassica oleracea HOM05D005979 ORTHO05D007848 1.3e-08 64.7 43 60.5
CBR_g27740 Chara braunii HOM05D000738 ORTHO05D000675 2.8e-06 57.0 62 40.3
Sc14g0005960 Simmondsia chinensis HOM05D005625 ORTHO05D007564 4.7e-06 56.2 77 41.6
BcaC09g47773 Brassica carinata HOM05D005979 ORTHO05D007848 6.1e-06 55.8 38 57.9


User provided reference genes

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