Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62032115 Chenopodium quinoa HOM05D006809 ORTHO05D008609 6.8e-224 780.4 412 100.0
AUR62039658 Chenopodium quinoa HOM05D006809 ORTHO05D008609 3.0e-171 605.5 413 83.3
Hund09945 Selenicereus undatus HOM05D006809 ORTHO05D008609 1.7e-166 589.7 416 72.8
Sc12g0007330 Simmondsia chinensis HOM05D006809 ORTHO05D008609 2.0e-151 539.7 451 67.2
EL10Ac5g11165 Beta vulgaris HOM05D006809 ORTHO05D008609 1.4e-149 533.5 477 60.4
Ah.11g047550 Amaranthus hybridus HOM05D006809 ORTHO05D008609 2.0e-146 523.1 404 65.8
Cfa019358 Carpinus fangiana HOM05D006809 ORTHO05D008609 2.9e-142 509.2 449 63.5
Nn4g23476 Nelumbo nucifera HOM05D006809 ORTHO05D008609 8.5e-142 507.7 449 63.5
TAR629G2676 Trochodendron aralioides HOM05D006809 ORTHO05D008609 1.2e-140 503.8 449 64.1
QL10p020149 Quercus lobata HOM05D006809 ORTHO05D008609 6.7e-139 498.0 448 63.4
Lsat_1_v5_gn_5_23620 Lactuca sativa HOM05D006809 ORTHO05D008609 4.4e-138 495.4 438 63.9
CiPaw.12G009200 Carya illinoinensis HOM05D006809 ORTHO05D008609 2.2e-137 493.0 449 62.1
Cc11_g04700 Coffea canephora HOM05D006809 ORTHO05D008609 4.8e-137 491.9 462 56.1
ECA246G1387 Erigeron canadensis HOM05D006809 ORTHO05D008609 1.1e-136 490.7 439 59.2
CSS0043969 Camellia sinensis var. sinensis HOM05D006809 ORTHO05D008609 1.4e-136 490.3 451 60.5
Hma1.2p1_0060F.1_g032880 Hydrangea macrophylla HOM05D006809 ORTHO05D008609 3.1e-136 489.2 446 62.1
vmacro16181 Vaccinium macrocarpon HOM05D006809 ORTHO05D008609 1.6e-135 486.9 555 53.3
Cpa.g.sc94.80 Carica papaya HOM05D006809 ORTHO05D008609 2.6e-135 486.1 435 62.8
PSO017G0895 Papaver somniferum HOM05D006809 ORTHO05D008609 2.6e-135 486.1 451 61.9
FAN08G0740 Fragaria x ananassa HOM05D006809 ORTHO05D008609 4.5e-135 485.3 470 55.1
MD06G1203600 Malus domestica HOM05D006809 ORTHO05D008609 2.2e-134 483.0 445 59.8
PSO478G2035 Papaver somniferum HOM05D006809 ORTHO05D008609 2.2e-134 483.0 451 61.6
Rhsim08G0143500 Rhododendron simsii HOM05D006809 ORTHO05D008609 3.8e-134 482.3 599 47.1
Thecc.03G104800 Theobroma cacao HOM05D006809 ORTHO05D008609 3.8e-134 482.3 446 61.2
Actinidia04809 Actinidia chinensis HOM05D006809 ORTHO05D008609 1.5e-133 480.3 446 60.1
Manes.14G087700 Manihot esculenta HOM05D006809 ORTHO05D008609 1.9e-133 479.9 446 60.5
Duzib205G0618 Durio zibethinus HOM05D006809 ORTHO05D008609 2.5e-133 479.6 450 60.9
Dinv22761 Davidia involucrata HOM05D006809 ORTHO05D008609 5.5e-133 478.4 435 63.2
CANSAT11G1370 Cannabis sativa HOM05D006809 ORTHO05D008609 3.6e-132 475.7 449 60.8
Gohir.A07G067300 Gossypium hirsutum HOM05D006809 ORTHO05D008609 4.7e-132 475.3 446 61.2
MSTRG.11330 Avicennia marina HOM05D006809 ORTHO05D008609 8.0e-132 474.6 448 60.9
Aqoxy3G03648 Aquilegia oxysepala HOM05D006809 ORTHO05D008609 1.4e-131 473.8 443 61.4
COL.COLO4_24315 Corchorus olitorius HOM05D006809 ORTHO05D008609 3.0e-131 472.6 446 59.9
Ciclev10023968m.g Citrus clementina HOM05D006809 ORTHO05D008609 4.0e-131 472.2 463 59.0
HanXRQChr05g0154271 Helianthus annuus HOM05D006809 ORTHO05D008609 8.8e-131 471.1 443 60.3
Gorai.001G076000 Gossypium raimondii HOM05D006809 ORTHO05D008609 2.0e-130 469.9 446 60.3
Nitab4.5_0001797g0090 Nicotiana tabacum HOM05D006809 ORTHO05D008609 5.7e-130 468.4 440 61.8
Gohir.D07G071900 Gossypium hirsutum HOM05D006809 ORTHO05D008609 7.5e-130 468.0 446 60.1
Haze_07749 Corylus avellana HOM05D006809 ORTHO05D008609 1.7e-129 466.8 449 61.0
GSVIVG01008127001 Vitis vinifera HOM05D006809 ORTHO05D008609 3.7e-129 465.7 452 60.6
CsaV3_1G006160 Cucumis sativus L. HOM05D006809 ORTHO05D008609 8.3e-129 464.5 449 58.1
TWI81G0697 Tripterygium wilfordii HOM05D006809 ORTHO05D008609 2.4e-128 463.0 444 59.0
RcHm_v2.0_Chr7g0183371 Rosa chinensis HOM05D006809 ORTHO05D008609 1.6e-127 460.3 446 60.1
MELO3C002045.2 Cucumis melo HOM05D006809 ORTHO05D008609 2.0e-127 459.9 449 57.9
FAN13G1268 Fragaria x ananassa HOM05D006809 ORTHO05D008609 5.9e-127 458.4 449 59.0
Sopen12g018840 Solanum pennellii HOM05D006809 ORTHO05D008609 8.5e-126 454.5 441 60.1
Eucgr.K02539 Eucalyptus grandis HOM05D006809 ORTHO05D008609 4.2e-125 452.2 448 58.9
Nitab4.5_0001723g0010 Nicotiana tabacum HOM05D006809 ORTHO05D008609 7.2e-125 451.4 472 58.3
CSS0020904 Camellia sinensis var. sinensis HOM05D006809 ORTHO05D008609 1.2e-124 450.7 417 59.7
Glyma.06G205000 Glycine max HOM05D006809 ORTHO05D008609 2.7e-124 449.5 444 59.0
SGA_v2.0_scaffold313G48281 Striga asiatica HOM05D006809 ORTHO05D008609 4.7e-124 448.7 451 55.0
Ca_02916_v3 Cicer arietinum L. HOM05D006809 ORTHO05D008609 6.1e-124 448.4 445 58.9
DCAR_010163 Daucus carota HOM05D006809 ORTHO05D008609 1.7e-121 440.3 444 58.8
PGR044G2265 Punica granatum HOM05D006809 ORTHO05D008609 2.8e-121 439.5 451 58.1
FAN18G0725 Fragaria x ananassa HOM05D006809 ORTHO05D008609 3.7e-121 439.1 449 57.9
Lj1g0027663 Lotus japonicus HOM05D006809 ORTHO05D008609 1.8e-120 436.8 451 57.4
Medtr2g060520 Medicago truncatula HOM05D006809 ORTHO05D008609 5.4e-120 435.3 442 56.1
Lalb_Chr07g0189231 Lupinus albus HOM05D006809 ORTHO05D008609 7.0e-120 434.9 440 58.2
arahy.Tifrunner.gnm1.ann1.23QZVI Arachis hypogaea HOM05D006809 ORTHO05D008609 9.1e-120 434.5 462 56.3
ATR0827G115 Amborella trichopoda HOM05D006809 ORTHO05D008609 1.6e-119 433.7 514 53.3
Lj5A134T75 Lonicera japonica HOM05D006809 ORTHO05D008609 3.8e-118 429.1 446 57.4
Aa31LG11G2360 Aethionema arabicum HOM05D006809 ORTHO05D008609 6.6e-118 428.3 452 50.9
ClCG04G011640 Citrullus lanatus HOM05D006809 ORTHO05D000432 1.2e-116 424.1 462 55.0
AagrBONN_evm.TU.Sc2ySwM_117.1929 Anthoceros agrestis HOM05D006809 ORTHO05D008609 2.1e-116 423.3 446 51.8
Oeu014424.1 Olea europaea HOM05D006809 ORTHO05D008609 1.0e-115 421.0 414 58.0
Sed0027469 Sechium edule HOM05D006809 ORTHO05D008609 1.8e-115 420.2 416 58.2
Pp3c18_4200 Physcomitrium patens HOM05D006809 ORTHO05D008609 5.2e-115 418.7 447 52.3
CARHR274620 Cardamine hirsuta HOM05D006809 ORTHO05D008609 3.5e-111 406.0 445 53.9
AT5G60940 Arabidopsis thaliana HOM05D006809 ORTHO05D008609 5.0e-110 402.1 448 53.1
Sp2g24250 Schrenkiella parvula HOM05D006809 ORTHO05D008609 1.9e-109 400.2 445 53.5
VMungo1309G1606 Vigna mungo HOM05D006809 ORTHO05D008609 9.5e-109 397.9 407 58.2
Carub.0008s2163 Capsella rubella HOM05D006809 ORTHO05D008609 5.2e-107 392.1 444 52.7
SalBow5G3990 Salvia bowleyana HOM05D006809 ORTHO05D008609 5.2e-107 392.1 442 54.5
Thhalv10004278m.g Eutrema salsugineum HOM05D006809 ORTHO05D008609 2.6e-106 389.8 441 53.3
A03p46650 Brassica napus HOM05D006809 ORTHO05D008609 9.8e-106 387.9 449 47.9
Mapoly0118s0024 Marchantia polymorpha HOM05D006809 ORTHO05D008609 1.3e-105 387.5 440 54.5
BraA03t13789Z Brassica rapa HOM05D006809 ORTHO05D008609 3.7e-105 386.0 449 47.9
Os03g0754900 Oryza sativa ssp. japonica HOM05D006809 ORTHO05D008609 1.1e-104 384.4 448 54.0
BcaC06g33207 Brassica carinata HOM05D006809 ORTHO05D008609 9.2e-104 381.3 454 52.2
Zm00001eb057630 Zea mays HOM05D006809 ORTHO05D008609 1.2e-103 380.9 445 53.3
AL8G37560 Arabidopsis lyrata HOM05D006809 ORTHO05D008609 3.5e-103 379.4 448 51.3
BcaNung06908 Brassica carinata HOM05D006809 ORTHO05D008609 3.5e-103 379.4 445 51.9
BolC7t44995H Brassica oleracea HOM05D006809 ORTHO05D008609 1.0e-102 377.9 448 52.0
C07p44720 Brassica napus HOM05D006809 ORTHO05D008609 1.3e-102 377.5 448 51.8
Phvul.009G203000 Phaseolus vulgaris HOM05D006809 ORTHO05D008609 8.6e-102 374.8 375 56.0
Hma1.2p1_0060F.1_g032870 Hydrangea macrophylla HOM05D006809 ORTHO05D008609 2.6e-98 363.2 444 46.8
FvH4_5g13570 Fragaria vesca HOM05D006809 ORTHO05D008609 3.6e-92 342.8 343 58.9
Prupe.5G207700 Prunus persica HOM05D006809 ORTHO05D008609 1.7e-86 323.9 384 53.4
SMO358G0618 Selaginella moellendorffii HOM05D006809 ORTHO05D008609 1.2e-84 317.8 437 49.0
Ah.11g047540 Amaranthus hybridus HOM05D006809 ORTHO05D008609 2.4e-83 313.5 373 49.9
Atru.chr9.503 Acer truncatum HOM05D006809 ORTHO05D008609 1.2e-82 311.2 455 45.9
Thecc.K0005900 Theobroma cacao HOM05D006809 ORTHO05D008609 1.1e-80 304.7 311 58.5
CDE10G1159 Ceratophyllum demersum HOM05D006809 ORTHO05D008609 7.4e-69 265.4 267 55.1
vmacro17627 Vaccinium macrocarpon HOM05D006809 ORTHO05D008609 4.5e-66 256.1 269 53.9
TPR.G23013 Trifolium pratense HOM05D007385 ORTHO05D009349 1.6e-63 247.7 290 54.1
vmacro17626 Vaccinium macrocarpon HOM05D006809 ORTHO05D008609 1.6e-55 221.1 189 68.3
PGSC0003DMG400023259 Solanum tuberosum HOM05D006809 ORTHO05D008609 1.1e-43 181.8 158 73.4
CBR_g41384 Chara braunii HOM05D006809 ORTHO05D000002 4.2e-40 169.9 195 56.4
Peaxi162Scf01223g00014 Petunia axillaris HOM05D006809 ORTHO05D008609 5.5e-40 169.5 189 50.8
Glyma.04G160301 Glycine max HOM05D006809 ORTHO05D008609 3.9e-38 163.3 147 67.3
Psat1g128360 Pisum sativum HOM05D006809 ORTHO05D008609 8.8e-38 162.2 237 48.5
Medtr6g088180 Medicago truncatula HOM05D006809 ORTHO05D008609 5.7e-37 159.5 183 51.9
CDE10G1173 Ceratophyllum demersum HOM05D006809 ORTHO05D008609 1.4e-32 144.8 116 58.6
Haze_26316 Corylus avellana HOM05D006809 ORTHO05D008609 3.2e-32 143.7 355 31.5
Medtr2g060475 Medicago truncatula HOM05D006809 ORTHO05D008609 3.9e-30 136.7 105 57.1
Solyc12g038523.1 Solanum lycopersicum HOM05D006809 ORTHO05D008609 1.1e-29 135.2 102 67.6
MD14G1214700 Malus domestica HOM05D006809 ORTHO05D008609 1.5e-29 134.8 134 56.7
Solyc12g038527.1 Solanum lycopersicum HOM05D006809 ORTHO05D008609 3.3e-29 133.7 78 75.6
Solyc12g038550.1 Solanum lycopersicum HOM05D006809 ORTHO05D008609 5.3e-27 126.3 74 77.0
MD14G1214500 Malus domestica HOM05D006809 ORTHO05D008609 9.1e-27 125.6 134 52.2
CAN.G131.10 Capsicum annuum HOM05D006809 ORTHO05D008609 3.8e-25 120.2 135 54.1
arahy.Tifrunner.gnm1.ann1.BJ4A4M Arachis hypogaea HOM05D006809 ORTHO05D008609 3.2e-24 117.1 104 59.6
Psat6g135880 Pisum sativum HOM05D006809 ORTHO05D008609 6.1e-23 112.8 76 68.4
SEGI_17180 Sequoiadendron giganteum HOM05D006809 ORTHO05D008609 2.6e-21 107.5 61 80.3
SEGI_19563 Sequoiadendron giganteum HOM05D006809 ORTHO05D008609 6.5e-17 92.8 67 68.7
Psat1g128400 Pisum sativum HOM05D006809 ORTHO05D008609 3.4e-13 80.5 55 70.9
Thecc.03G286100 Theobroma cacao HOM05D006809 ORTHO05D008609 6.3e-12 76.3 50 68.0
MD14G1214400 Malus domestica HOM05D006809 ORTHO05D008609 2.9e-09 67.4 41 68.3
Medtr2g061440 Medicago truncatula HOM05D002527 ORTHO05D001267 2.7e-07 60.8 39 71.8
CBR_g71889 Chara braunii HOM05D006809 ORTHO05D008609 1.4e-06 58.5 53 56.6
PRCOL_00003575 Prasinoderma coloniale HOM05D003606 ORTHO05D004650 3.0e-06 57.4 247 23.9


User provided reference genes

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