Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62032092 Chenopodium quinoa HOM05D005111 ORTHO05D006650 1.9e-101 372.5 184 100.0
Ah.16g106920 Amaranthus hybridus HOM05D005111 ORTHO05D006650 1.6e-92 342.8 184 89.1
EL10Ac2g03364 Beta vulgaris HOM05D005111 ORTHO05D006650 3.1e-91 338.6 178 92.1
GSVIVG01032518001 Vitis vinifera HOM05D005111 ORTHO05D006650 5.6e-85 317.8 184 82.6
Dinv35035 Davidia involucrata HOM05D005111 ORTHO05D006650 3.6e-84 315.1 184 80.4
Dinv33518 Davidia involucrata HOM05D005111 ORTHO05D006650 4.7e-84 314.7 184 80.4
Hma1.2p1_0697F.1_g204930 Hydrangea macrophylla HOM05D005111 ORTHO05D006650 6.2e-84 314.3 182 79.7
CSS0013590 Camellia sinensis var. sinensis HOM05D005111 ORTHO05D006650 8.0e-84 313.9 184 79.9
Lsat_1_v5_gn_8_69941 Lactuca sativa HOM05D005111 ORTHO05D006650 3.1e-83 312.0 184 77.7
MD09G1037200 Malus domestica HOM05D005111 ORTHO05D006650 4.0e-83 311.6 184 79.9
Prupe.3G280400 Prunus persica HOM05D005111 ORTHO05D006650 4.0e-83 311.6 184 80.4
TWI56G1475 Tripterygium wilfordii HOM05D005111 ORTHO05D006650 4.0e-83 311.6 184 79.3
MD17G1038600 Malus domestica HOM05D005111 ORTHO05D006650 6.8e-83 310.8 184 79.9
Gohir.D09G024300 Gossypium hirsutum HOM05D005111 ORTHO05D006650 8.9e-83 310.5 182 80.2
Nn3g16957 Nelumbo nucifera HOM05D005111 ORTHO05D006650 1.2e-82 310.1 184 81.0
ECA246G3776 Erigeron canadensis HOM05D005111 ORTHO05D006650 1.5e-82 309.7 184 77.7
Gorai.006G028500 Gossypium raimondii HOM05D005111 ORTHO05D006650 2.0e-82 309.3 182 79.7
HanXRQChr15g0474461 Helianthus annuus HOM05D005111 ORTHO05D006650 2.0e-82 309.3 180 78.9
CiPaw.04G023100 Carya illinoinensis HOM05D005111 ORTHO05D006650 2.6e-82 308.9 184 79.9
TWI36G0044 Tripterygium wilfordii HOM05D005111 ORTHO05D006650 4.4e-82 308.1 184 78.8
Haze_14637 Corylus avellana HOM05D005111 ORTHO05D006650 5.8e-82 307.8 183 79.8
RcHm_v2.0_Chr2g0170641 Rosa chinensis HOM05D005111 ORTHO05D006650 5.8e-82 307.8 184 79.3
Lj7P412T18 Lonicera japonica HOM05D005111 ORTHO05D006650 9.8e-82 307.0 182 78.6
Oeu047328.1 Olea europaea HOM05D005111 ORTHO05D006650 9.8e-82 307.0 182 78.6
Cfa007459 Carpinus fangiana HOM05D005111 ORTHO05D006650 1.7e-81 306.2 184 78.8
COL.COLO4_32007 Corchorus olitorius HOM05D005111 ORTHO05D006650 1.7e-81 306.2 184 78.3
Actinidia28460 Actinidia chinensis HOM05D005111 ORTHO05D006650 2.2e-81 305.8 184 77.2
Actinidia36066 Actinidia chinensis HOM05D005111 ORTHO05D006650 2.2e-81 305.8 184 77.2
CANSAT64G0323 Cannabis sativa HOM05D005111 ORTHO05D006650 4.9e-81 304.7 184 78.8
FAN09G2278 Fragaria x ananassa HOM05D005111 ORTHO05D006650 4.9e-81 304.7 184 77.7
Duzib147G1596 Durio zibethinus HOM05D005111 ORTHO05D006650 8.3e-81 303.9 184 76.6
FAN02G1641 Fragaria x ananassa HOM05D005111 ORTHO05D006650 8.3e-81 303.9 184 77.2
FAN05G4920 Fragaria x ananassa HOM05D005111 ORTHO05D006650 1.1e-80 303.5 184 77.2
TAR622G0537 Trochodendron aralioides HOM05D005111 ORTHO05D006650 1.1e-80 303.5 184 78.8
Potri.001G350300 Populus trichocarpa HOM05D005111 ORTHO05D006650 1.2e-79 300.1 181 76.2
ClCG09G018710 Citrullus lanatus HOM05D005111 ORTHO05D006650 1.6e-79 299.7 184 75.5
ClCG09G018770 Citrullus lanatus HOM05D005111 ORTHO05D006650 1.6e-79 299.7 184 75.5
Thecc.04G004900 Theobroma cacao HOM05D005111 ORTHO05D006650 1.6e-79 299.7 184 76.6
Aqoxy3G00932 Aquilegia oxysepala HOM05D005111 ORTHO05D006650 2.1e-79 299.3 181 76.8
MELO3C021519.2 Cucumis melo HOM05D005111 ORTHO05D006650 2.1e-79 299.3 184 75.5
CsaV3_5G037360 Cucumis sativus L. HOM05D005111 ORTHO05D006650 2.1e-79 299.3 184 75.5
Nn4g22869 Nelumbo nucifera HOM05D005111 ORTHO05D006650 2.7e-79 298.9 184 77.7
Rhsim08G0056700 Rhododendron simsii HOM05D005111 ORTHO05D006650 2.7e-79 298.9 184 76.6
Gohir.A10G101300 Gossypium hirsutum HOM05D005111 ORTHO05D006650 3.5e-79 298.5 184 75.5
CiPaw.03G035600 Carya illinoinensis HOM05D005111 ORTHO05D006650 6.0e-79 297.7 184 77.7
Duzib264G0177 Durio zibethinus HOM05D005111 ORTHO05D006650 6.0e-79 297.7 184 76.6
Nitab4.5_0000632g0170 Nicotiana tabacum HOM05D005111 ORTHO05D006650 6.0e-79 297.7 182 75.8
QL02p077635 Quercus lobata HOM05D005111 ORTHO05D006650 6.0e-79 297.7 182 76.4
Sed0001363 Sechium edule HOM05D005111 ORTHO05D006650 6.0e-79 297.7 184 75.5
Sabra16G0229800 Salix brachista HOM05D005111 ORTHO05D006650 1.0e-78 297.0 181 75.7
CDE10G0493 Ceratophyllum demersum HOM05D005111 ORTHO05D006650 1.3e-78 296.6 184 76.6
Gorai.011G096000 Gossypium raimondii HOM05D005111 ORTHO05D006650 1.3e-78 296.6 184 74.5
Nitab4.5_0000844g0360 Nicotiana tabacum HOM05D005111 ORTHO05D006650 1.3e-78 296.6 184 75.0
Sed0025070 Sechium edule HOM05D005111 ORTHO05D006650 1.3e-78 296.6 180 76.7
TAR374G1688 Trochodendron aralioides HOM05D005111 ORTHO05D006650 1.7e-78 296.2 180 77.8
Hma1.2p1_2931F.1_g330500 Hydrangea macrophylla HOM05D005111 ORTHO05D006650 2.3e-78 295.8 184 74.5
Manes.17G124400 Manihot esculenta HOM05D005111 ORTHO05D006650 2.3e-78 295.8 184 75.0
PGR083G2413 Punica granatum HOM05D005111 ORTHO05D006650 2.3e-78 295.8 185 76.8
FvH4_6g50340 Fragaria vesca HOM05D005111 ORTHO05D006650 3.0e-78 295.4 177 78.5
FAN14G5899 Fragaria x ananassa HOM05D005111 ORTHO05D006650 3.0e-78 295.4 177 78.5
Peaxi162Scf00036g00163 Petunia axillaris HOM05D005111 ORTHO05D006650 3.9e-78 295.0 182 75.3
Gohir.D10G087701 Gossypium hirsutum HOM05D005111 ORTHO05D006650 5.1e-78 294.7 184 74.5
Hma1.2p1_0967F.1_g242385 Hydrangea macrophylla HOM05D005111 ORTHO05D006650 6.6e-78 294.3 184 74.5
Solyc02g081950.4 Solanum lycopersicum HOM05D005111 ORTHO05D006650 6.6e-78 294.3 182 75.3
CDE10G0889 Ceratophyllum demersum HOM05D004213 ORTHO05D005091 8.6e-78 293.9 177 79.7
Sopen02g026580 Solanum pennellii HOM05D005111 ORTHO05D006650 8.6e-78 293.9 182 75.3
Gohir.D04G053100 Gossypium hirsutum HOM05D005111 ORTHO05D006650 1.1e-77 293.5 182 74.7
Gorai.012G059600 Gossypium raimondii HOM05D005111 ORTHO05D006650 1.1e-77 293.5 182 74.7
Manes.15G180000 Manihot esculenta HOM05D005111 ORTHO05D006650 1.1e-77 293.5 184 75.0
CAN.G809.38 Capsicum annuum HOM05D005111 ORTHO05D006650 1.5e-77 293.1 182 75.3
DCAR_013972 Daucus carota HOM05D005111 ORTHO05D006650 1.5e-77 293.1 182 74.2
Gohir.A05G361100 Gossypium hirsutum HOM05D005111 ORTHO05D006650 1.5e-77 293.1 182 74.7
PGSC0003DMG400007321 Solanum tuberosum HOM05D005111 ORTHO05D006650 1.9e-77 292.7 182 74.7
Aa31LG2G4740 Aethionema arabicum HOM05D005111 ORTHO05D006650 3.3e-77 292.0 184 76.1
Sp2g17070 Schrenkiella parvula HOM05D005111 ORTHO05D006650 4.3e-77 291.6 182 76.4
Thhalv10005667m.g Eutrema salsugineum HOM05D005111 ORTHO05D006650 7.3e-77 290.8 184 75.0
Atru.chr6.2171 Acer truncatum HOM05D005111 ORTHO05D006650 1.6e-76 289.7 184 73.9
Cc07_g02510 Coffea canephora HOM05D005111 ORTHO05D006650 2.8e-76 288.9 178 75.8
AT5G40190 Arabidopsis thaliana HOM05D005111 ORTHO05D006650 4.7e-76 288.1 184 73.9
SalBow1G6258 Salvia bowleyana HOM05D005111 ORTHO05D006650 4.7e-76 288.1 177 75.7
Sc20g0002810 Simmondsia chinensis HOM05D005111 ORTHO05D006650 4.7e-76 288.1 170 82.4
SEGI_23218 Sequoiadendron giganteum HOM05D005111 ORTHO05D006650 8.1e-76 287.3 182 73.6
Carub.0007s3546 Capsella rubella HOM05D005111 ORTHO05D006650 2.3e-75 285.8 184 73.4
Potri.017G073800 Populus trichocarpa HOM05D005111 ORTHO05D006650 2.3e-75 285.8 185 73.5
AL7G49820 Arabidopsis lyrata HOM05D005111 ORTHO05D006650 4.0e-75 285.0 184 72.8
THA.LOC104823919 Tarenaya hassleriana HOM05D005111 ORTHO05D006650 4.0e-75 285.0 184 74.5
Migut.H00147 Erythranthe guttata HOM05D005111 ORTHO05D006650 6.8e-75 284.3 178 74.2
Ciclev10016872m.g Citrus clementina HOM05D005111 ORTHO05D006650 8.9e-75 283.9 184 72.8
AL5G17640 Arabidopsis lyrata HOM05D005111 ORTHO05D006650 1.2e-74 283.5 183 73.2
A06p40670 Brassica napus HOM05D005111 ORTHO05D006650 1.5e-74 283.1 182 73.6
BraA06t26987Z Brassica rapa HOM05D005111 ORTHO05D006650 1.5e-74 283.1 182 73.6
MSTRG.15504 Avicennia marina HOM05D005111 ORTHO05D006650 2.6e-74 282.3 178 74.2
Nitab4.5_0000389g0080 Nicotiana tabacum HOM05D005111 ORTHO05D006650 2.6e-74 282.3 182 73.1
unitig_744.g24353 Utricularia gibba HOM05D005111 ORTHO05D006650 3.4e-74 282.0 179 75.4
BcaC06g33750 Brassica carinata HOM05D005111 ORTHO05D006650 7.6e-74 280.8 182 73.1
C07p37330 Brassica napus HOM05D005111 ORTHO05D006650 7.6e-74 280.8 182 73.1
BolC7t44243H Brassica oleracea HOM05D005111 ORTHO05D006650 7.6e-74 280.8 182 73.1
Nitab4.5_0000005g0410 Nicotiana tabacum HOM05D005111 ORTHO05D006650 9.9e-74 280.4 182 72.5
VMungo0464G0112 Vigna mungo HOM05D005111 ORTHO05D006650 1.3e-73 280.0 185 70.3
MSTRG.3306 Avicennia marina HOM05D005111 ORTHO05D006650 1.7e-73 279.6 178 74.2
PSO478G1103 Papaver somniferum HOM05D005111 ORTHO05D006650 1.7e-73 279.6 184 72.8
CARHR261950 Cardamine hirsuta HOM05D005111 ORTHO05D006650 2.9e-73 278.9 184 71.7
Thhalv10027951m.g Eutrema salsugineum HOM05D005111 ORTHO05D006650 4.9e-73 278.1 180 73.3
THA.LOC104805409 Tarenaya hassleriana HOM05D005111 ORTHO05D006650 6.4e-73 277.7 179 73.7
Eucgr.J02178 Eucalyptus grandis HOM05D005111 ORTHO05D006650 1.4e-72 276.6 184 69.0
Glyma.19G011900 Glycine max HOM05D005111 ORTHO05D006650 1.9e-72 276.2 187 71.1
SGA_v2.0_scaffold205G41716 Striga asiatica HOM05D005111 ORTHO05D006650 1.9e-72 276.2 183 69.4
VMungo0464G1864 Vigna mungo HOM05D005111 ORTHO05D006650 1.9e-72 276.2 185 69.7
Lj2g0005029 Lotus japonicus HOM05D005111 ORTHO05D006650 2.4e-72 275.8 177 71.2
PSO017G5141 Papaver somniferum HOM05D005111 ORTHO05D006650 2.4e-72 275.8 184 72.3
Phvul.004G019100 Phaseolus vulgaris HOM05D005111 ORTHO05D006650 2.4e-72 275.8 185 69.2
BcaC06g30932 Brassica carinata HOM05D005111 ORTHO05D006650 3.2e-72 275.4 193 71.0
Carub.0005s0666 Capsella rubella HOM05D005111 ORTHO05D006650 1.6e-71 273.1 183 72.7
Glyma.19G012000 Glycine max HOM05D005111 ORTHO05D006650 2.7e-71 272.3 182 72.0
SGA_v2.0_scaffold30G12485 Striga asiatica HOM05D005111 ORTHO05D006650 2.7e-71 272.3 178 70.8
SalBow7G0796 Salvia bowleyana HOM05D005111 ORTHO05D006650 7.8e-71 270.8 177 72.3
Phvul.004G019200 Phaseolus vulgaris HOM05D005111 ORTHO05D006650 1.0e-70 270.4 185 68.1
Aqoxy3G03068 Aquilegia oxysepala HOM05D005111 ORTHO05D006650 3.9e-70 268.5 182 71.4
AT3G28140 Arabidopsis thaliana HOM05D005111 ORTHO05D006650 5.1e-70 268.1 185 71.4
Migut.K01364 Erythranthe guttata HOM05D005111 ORTHO05D006650 5.1e-70 268.1 179 71.5
Glyma.13G070800 Glycine max HOM05D005111 ORTHO05D006650 5.1e-70 268.1 182 68.7
arahy.Tifrunner.gnm1.ann1.68QD6J Arachis hypogaea HOM05D005111 ORTHO05D006650 1.2e-68 263.5 180 71.7
CiPaw.06G158200 Carya illinoinensis HOM05D005111 ORTHO05D006650 2.1e-68 262.7 180 68.3
Psat1g060720 Pisum sativum HOM05D005111 ORTHO05D006650 2.2e-65 252.7 177 67.8
Ca_04214_v3 Cicer arietinum L. HOM05D005111 ORTHO05D006650 2.9e-65 252.3 178 66.9
TPR.G2260 Trifolium pratense HOM05D005111 ORTHO05D006650 3.2e-64 248.8 178 65.2
Actinidia33968 Actinidia chinensis HOM05D005111 ORTHO05D000390 6.0e-63 244.6 178 64.6
Lalb_Chr02g0159721 Lupinus albus HOM05D005111 ORTHO05D006650 1.1e-61 240.4 186 61.8
Medtr6g007773 Medicago truncatula HOM05D005111 ORTHO05D006650 3.1e-59 232.3 179 62.6
Sp7g01780 Schrenkiella parvula HOM05D005111 ORTHO05D006650 3.1e-59 232.3 179 64.8
BcaC06g30930 Brassica carinata HOM05D005111 ORTHO05D006650 8.4e-57 224.2 182 62.6
ATR1149G112 Amborella trichopoda HOM05D005111 ORTHO05D006650 1.9e-56 223.0 176 64.2
Cpa.g.sc286.5 Carica papaya HOM05D005111 ORTHO05D006650 3.0e-54 215.7 165 65.5
Ah.07g198430 Amaranthus hybridus HOM05D005111 ORTHO05D003582 4.8e-52 208.4 159 66.7
Gohir.A09G025000 Gossypium hirsutum HOM05D005111 ORTHO05D006650 3.2e-48 195.7 122 74.6
Os09g0375400 Oryza sativa ssp. japonica HOM05D005111 ORTHO05D006650 5.4e-48 194.9 184 54.9
FAN09G1763 Fragaria x ananassa HOM05D005111 ORTHO05D006650 3.7e-44 182.2 115 71.3
Zm00001eb098850 Zea mays HOM05D005111 ORTHO05D006650 2.4e-43 179.5 197 49.7
SMO367G0111 Selaginella moellendorffii HOM05D005111 ORTHO05D006650 2.5e-40 169.5 179 45.3
CARHR149780 Cardamine hirsuta HOM05D005111 ORTHO05D006650 2.4e-27 126.3 99 61.6
Actinidia27813 Actinidia chinensis HOM05D005111 ORTHO05D006650 5.3e-27 125.2 109 56.0
Nn8g40738 Nelumbo nucifera HOM05D005111 ORTHO05D006650 1.7e-25 120.2 76 76.3
BcaC03g17502 Brassica carinata HOM05D005111 ORTHO05D039329 5.5e-16 88.6 52 78.8
BraA02t08578Z Brassica rapa HOM05D000028 ORTHO05D000390 3.0e-14 82.8 59 66.1
A02p35780 Brassica napus HOM05D005111 ORTHO05D006650 6.7e-14 81.6 55 69.1
BcaC06g33752 Brassica carinata HOM05D005111 ORTHO05D093848 5.3e-11 72.0 41 82.9


User provided reference genes

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