Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62027984 Chenopodium quinoa HOM05D005445 ORTHO05D007043 1.4e-187 659.4 331 100.0
AUR62020729 Chenopodium quinoa HOM05D005445 ORTHO05D007043 6.4e-140 501.1 336 81.0
Ah.10g032730 Amaranthus hybridus HOM05D005445 ORTHO05D007043 1.3e-127 460.3 337 72.7
EL10Ac2g03624 Beta vulgaris HOM05D005445 ORTHO05D007043 2.1e-127 459.5 365 69.3
Hund03231 Selenicereus undatus HOM05D005445 ORTHO05D007043 2.4e-118 429.5 356 66.6
Ciclev10008923m.g Citrus clementina HOM05D005445 ORTHO05D007043 4.8e-103 378.6 356 59.3
GSVIVG01032266001 Vitis vinifera HOM05D005445 ORTHO05D007043 6.3e-103 378.3 323 64.1
CSS0000968 Camellia sinensis var. sinensis HOM05D005445 ORTHO05D007043 2.0e-101 373.2 356 60.1
Atru.chr7.1013 Acer truncatum HOM05D005445 ORTHO05D007043 3.4e-101 372.5 347 59.7
Actinidia07565 Actinidia chinensis HOM05D005445 ORTHO05D007043 3.8e-100 369.0 356 59.8
Hma1.2p1_0314F.1_g122070 Hydrangea macrophylla HOM05D005445 ORTHO05D007043 8.4e-100 367.9 355 59.7
Thecc.09G196900 Theobroma cacao HOM05D005445 ORTHO05D007043 1.1e-99 367.5 324 63.3
Manes.02G221800 Manihot esculenta HOM05D005445 ORTHO05D007043 2.1e-98 363.2 312 63.1
Prupe.1G063800 Prunus persica HOM05D005445 ORTHO05D007043 6.1e-98 361.7 331 60.1
TAR383G0382 Trochodendron aralioides HOM05D005445 ORTHO05D007043 6.1e-98 361.7 361 56.8
FvH4_4g06040 Fragaria vesca HOM05D005445 ORTHO05D007043 1.0e-97 360.9 350 57.7
Dinv12613 Davidia involucrata HOM05D005445 ORTHO05D007043 1.3e-97 360.5 356 58.1
Rhsim04G0099700 Rhododendron simsii HOM05D005445 ORTHO05D007043 1.3e-97 360.5 354 57.9
RcHm_v2.0_Chr4g0397601 Rosa chinensis HOM05D005445 ORTHO05D007043 1.3e-97 360.5 351 57.8
Gohir.A08G017100 Gossypium hirsutum HOM05D005445 ORTHO05D007043 1.8e-97 360.1 325 61.5
TAR383G1024 Trochodendron aralioides HOM05D005445 ORTHO05D007043 3.0e-97 359.4 352 57.7
CiPaw.15G161100 Carya illinoinensis HOM05D005445 ORTHO05D007043 3.9e-97 359.0 357 57.1
Cpa.g.sc115.19 Carica papaya HOM05D005445 ORTHO05D007043 5.1e-97 358.6 332 59.9
FAN17G2613 Fragaria x ananassa HOM05D005445 ORTHO05D007043 6.7e-97 358.2 348 57.2
Nn8g41135 Nelumbo nucifera HOM05D005445 ORTHO05D007043 9.7e-96 354.4 360 56.4
Gohir.D08G027500 Gossypium hirsutum HOM05D005445 ORTHO05D007043 1.3e-95 354.0 323 61.6
Gorai.004G024500 Gossypium raimondii HOM05D005445 ORTHO05D007043 1.6e-95 353.6 328 61.0
Aqoxy7G02630 Aquilegia oxysepala HOM05D005445 ORTHO05D007043 4.8e-95 352.1 341 56.9
TWI63G1185 Tripterygium wilfordii HOM05D005445 ORTHO05D007043 4.8e-95 352.1 325 60.3
Lj4g0004845 Lotus japonicus HOM05D005445 ORTHO05D007043 1.1e-94 350.9 355 56.9
CANSAT80G1260 Cannabis sativa HOM05D005445 ORTHO05D007043 1.4e-94 350.5 329 59.0
arahy.Tifrunner.gnm1.ann1.HNJF4G Arachis hypogaea HOM05D005445 ORTHO05D007043 3.1e-94 349.4 350 56.9
MD16G1238000 Malus domestica HOM05D005445 ORTHO05D007043 3.1e-94 349.4 331 58.9
Medtr8g101230 Medicago truncatula HOM05D005445 ORTHO05D007043 3.1e-94 349.4 350 57.4
Glyma.08G027200 Glycine max HOM05D005445 ORTHO05D007043 9.0e-94 347.8 356 56.5
MSTRG.26517 Avicennia marina HOM05D005445 ORTHO05D007043 1.5e-93 347.1 344 57.3
Ca_17431_v3 Cicer arietinum L. HOM05D005445 ORTHO05D007043 1.5e-93 347.1 350 56.0
Ca_17440_v3 Cicer arietinum L. HOM05D005445 ORTHO05D007043 1.5e-93 347.1 350 56.0
SGA_v2.0_scaffold485G52365 Striga asiatica HOM05D005445 ORTHO05D007043 2.0e-93 346.7 358 57.5
Psat7g020920 Pisum sativum HOM05D005445 ORTHO05D007043 3.4e-93 345.9 341 58.4
QL11p008649 Quercus lobata HOM05D005445 ORTHO05D007043 2.2e-92 343.2 369 54.7
TPR.G25470 Trifolium pratense HOM05D005445 ORTHO05D007043 3.8e-92 342.4 351 55.8
FAN07G1413 Fragaria x ananassa HOM05D005445 ORTHO05D007043 6.5e-92 341.7 348 56.0
CiPaw.16G104300 Carya illinoinensis HOM05D005445 ORTHO05D007043 8.5e-92 341.3 356 54.8
Solyc07g017400.3 Solanum lycopersicum HOM05D005445 ORTHO05D007043 1.1e-91 340.9 356 56.2
MBI13_g31572_MAGBIO Magnolia biondii HOM05D005445 ORTHO05D007043 2.5e-91 339.7 352 54.8
Lalb_Chr09g0332001 Lupinus albus HOM05D005445 ORTHO05D007043 4.2e-91 339.0 335 56.7
Sopen07g006100 Solanum pennellii HOM05D005445 ORTHO05D007043 4.2e-91 339.0 356 55.6
THA.LOC104815270 Tarenaya hassleriana HOM05D005445 ORTHO05D007043 7.2e-91 338.2 323 57.9
Nitab4.5_0000899g0030 Nicotiana tabacum HOM05D005445 ORTHO05D007043 9.4e-91 337.8 347 56.5
Cfa020755 Carpinus fangiana HOM05D005445 ORTHO05D007043 1.2e-90 337.4 308 61.0
Nitab4.5_0004036g0030 Nicotiana tabacum HOM05D005445 ORTHO05D007043 1.2e-90 337.4 343 57.4
VMungo0251G0086 Vigna mungo HOM05D005445 ORTHO05D007043 1.2e-90 337.4 355 55.5
DCAR_020460 Daucus carota HOM05D005445 ORTHO05D007043 2.1e-90 336.7 334 58.1
Os05g0594800 Oryza sativa ssp. japonica HOM05D005445 ORTHO05D007043 6.1e-90 335.1 339 56.3
arahy.Tifrunner.gnm1.ann1.K4ERET Arachis hypogaea HOM05D005445 ORTHO05D007043 7.9e-90 334.7 366 53.8
Duzib168G0912 Durio zibethinus HOM05D005445 ORTHO05D007043 1.4e-89 334.0 367 53.7
HPP92_028347 Vanilla planifolia HOM05D005445 ORTHO05D007043 2.3e-89 333.2 325 55.4
CDE06G0990 Ceratophyllum demersum HOM05D005445 ORTHO05D007043 3.0e-89 332.8 351 54.1
Phvul.002G302400 Phaseolus vulgaris HOM05D005445 ORTHO05D007043 6.7e-89 331.6 329 57.8
ECA234G2663 Erigeron canadensis HOM05D005445 ORTHO05D007043 8.8e-89 331.3 340 55.0
SalBow5G4362 Salvia bowleyana HOM05D005445 ORTHO05D007043 8.8e-89 331.3 357 55.7
Glyma.05G220700 Glycine max HOM05D005445 ORTHO05D007043 1.5e-88 330.5 356 54.8
Oeu028820.1 Olea europaea HOM05D005445 ORTHO05D007043 2.2e-87 326.6 335 55.8
AT2G26590 Arabidopsis thaliana HOM05D005445 ORTHO05D007043 1.1e-86 324.3 340 55.6
vmacro20760 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 1.1e-86 324.3 373 50.7
Sp4g09300 Schrenkiella parvula HOM05D005445 ORTHO05D007043 1.4e-86 323.9 337 55.8
C03p32210 Brassica napus HOM05D005445 ORTHO05D007043 3.1e-86 322.8 338 55.0
CAN.G146.2 Capsicum annuum HOM05D005445 ORTHO05D007043 3.1e-86 322.8 354 53.4
Cc00_g00070 Coffea canephora HOM05D005445 ORTHO05D007043 3.1e-86 322.8 347 53.9
Sabra06G0059700 Salix brachista HOM05D005445 ORTHO05D007043 3.1e-86 322.8 358 52.2
BcaC01g04909 Brassica carinata HOM05D005445 ORTHO05D007043 5.3e-86 322.0 336 55.1
CsaV3_2G009110 Cucumis sativus L. HOM05D005445 ORTHO05D007043 5.3e-86 322.0 326 56.7
BraA03t11899Z Brassica rapa HOM05D005445 ORTHO05D007043 1.5e-85 320.5 342 53.8
BcaB01g03027 Brassica carinata HOM05D005445 ORTHO05D007043 2.0e-85 320.1 336 55.1
BolC3t15563H Brassica oleracea HOM05D005445 ORTHO05D007043 2.0e-85 320.1 342 53.8
HanXRQChr10g0309531 Helianthus annuus HOM05D005445 ORTHO05D007043 5.9e-85 318.5 328 55.5
AL4G19530 Arabidopsis lyrata HOM05D005445 ORTHO05D007043 7.7e-85 318.2 344 54.7
CARHR118490 Cardamine hirsuta HOM05D005445 ORTHO05D007043 1.3e-84 317.4 338 55.3
ClCG11G011350 Citrullus lanatus HOM05D005445 ORTHO05D007043 2.2e-84 316.6 314 58.0
MELO3C003927.2 Cucumis melo HOM05D005445 ORTHO05D007043 2.9e-84 316.2 326 56.4
Thhalv10000977m.g Eutrema salsugineum HOM05D005445 ORTHO05D007043 6.5e-84 315.1 329 55.0
Carub.0004s0844 Capsella rubella HOM05D005445 ORTHO05D007043 8.5e-84 314.7 334 54.2
Lsat_1_v5_gn_5_80620 Lactuca sativa HOM05D005445 ORTHO05D007043 1.1e-83 314.3 325 55.4
Sed0003073 Sechium edule HOM05D005445 ORTHO05D007043 1.4e-83 313.9 315 58.4
Aa31LG5G9140 Aethionema arabicum HOM05D005445 ORTHO05D007043 1.9e-83 313.5 339 52.8
Eucgr.C00062 Eucalyptus grandis HOM05D005445 ORTHO05D007043 4.2e-83 312.4 319 56.1
A03p26880 Brassica napus HOM05D005445 ORTHO05D007043 7.9e-82 308.1 342 52.3
Thhalv10016855m.g Eutrema salsugineum HOM05D005445 ORTHO05D007043 1.0e-81 307.8 310 56.8
PGR142G0598 Punica granatum HOM05D005445 ORTHO05D007043 6.7e-81 305.1 338 53.3
Zm00001eb297230 Zea mays HOM05D005445 ORTHO05D007043 6.7e-81 305.1 350 52.0
Migut.L01918 Erythranthe guttata HOM05D005445 ORTHO05D007043 8.8e-81 304.7 333 54.1
PSO170G6081 Papaver somniferum HOM05D005445 ORTHO05D007043 3.3e-80 302.8 353 51.3
Duzib170G0675 Durio zibethinus HOM05D005445 ORTHO05D007043 8.2e-79 298.1 336 52.4
PSO063G4940 Papaver somniferum HOM05D005445 ORTHO05D007043 1.8e-78 297.0 334 50.9
ATR0626G233 Amborella trichopoda HOM05D005445 ORTHO05D007043 7.0e-78 295.0 350 50.3
Lj5C772G2 Lonicera japonica HOM05D005445 ORTHO05D007043 2.6e-77 293.1 287 57.5
unitig_85.g27245 Utricularia gibba HOM05D005445 ORTHO05D007043 2.6e-77 293.1 322 52.5
Sc14g0007060 Simmondsia chinensis HOM05D005445 ORTHO05D007043 4.5e-77 292.4 249 64.3
Potri.006G078800 Populus trichocarpa HOM05D005445 ORTHO05D007043 7.7e-77 291.6 353 51.0
SEGI_14233 Sequoiadendron giganteum HOM05D005445 ORTHO05D007043 4.7e-74 282.3 321 49.8
Lalb_Chr05g0223811 Lupinus albus HOM05D005445 ORTHO05D007043 1.5e-72 277.3 264 57.2
Peaxi162Scf01184g00140 Petunia axillaris HOM05D005445 ORTHO05D007043 3.8e-68 262.7 368 44.0
Dinv26479 Davidia involucrata HOM05D005445 ORTHO05D007043 3.2e-67 259.6 251 59.8
Hma1.2p1_0314F.1_g122080 Hydrangea macrophylla HOM05D005445 ORTHO05D007043 2.3e-65 253.4 248 58.1
Pp3c21_370 Physcomitrium patens HOM05D005445 ORTHO05D007043 6.3e-63 245.4 340 43.2
Dinv00323 Davidia involucrata HOM05D005445 ORTHO05D007043 2.7e-58 229.9 222 59.9
Mapoly0011s0124 Marchantia polymorpha HOM05D005445 ORTHO05D007043 6.8e-57 225.3 311 44.7
CDE02G2220 Ceratophyllum demersum HOM05D005445 ORTHO05D007043 4.1e-54 216.1 256 50.8
SMO116G0379 Selaginella moellendorffii HOM05D005445 ORTHO05D007043 7.3e-51 205.3 330 40.6
CBR_g28055 Chara braunii HOM05D005445 ORTHO05D007043 2.1e-50 203.8 385 39.0
COL.COLO4_23410 Corchorus olitorius HOM05D005445 ORTHO05D007043 2.0e-40 170.6 157 62.4
Haze_19097 Corylus avellana HOM05D005445 ORTHO05D007043 4.1e-38 162.9 202 52.0
Sc14g0006300 Simmondsia chinensis HOM05D005445 ORTHO05D007043 1.6e-37 161.0 135 62.2
vmacro10242 Vaccinium macrocarpon HOM05D002150 ORTHO05D002191 2.3e-28 130.6 122 57.4
vmacro07726 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 1.1e-27 128.3 179 45.3
HPP92_015797 Vanilla planifolia HOM05D005445 ORTHO05D007043 7.6e-24 115.5 307 31.3
C03p32230 Brassica napus HOM05D005445 ORTHO05D007043 2.2e-23 114.0 105 58.1
BolC3t15564H Brassica oleracea HOM05D005445 ORTHO05D007043 2.2e-23 114.0 105 58.1
MD13G1232400 Malus domestica HOM05D005445 ORTHO05D007043 1.1e-22 111.7 115 52.2
HanXRQChr09g0242981 Helianthus annuus HOM05D005445 ORTHO05D007043 2.5e-19 100.5 89 60.7
HanXRQChr13g0395691 Helianthus annuus HOM05D005445 ORTHO05D007043 2.5e-19 100.5 89 60.7
HanXRQChr09g0248391 Helianthus annuus HOM05D005445 ORTHO05D007043 4.3e-19 99.8 85 62.4
MCO02G027 Micromonas commoda HOM05D005445 ORTHO05D007043 2.1e-18 97.4 322 27.0
HanXRQChr09g0246171 Helianthus annuus HOM05D005445 ORTHO05D007043 6.2e-18 95.9 82 62.2
SGA_v2.0_scaffold21G09605 Striga asiatica HOM05D005445 ORTHO05D007043 3.8e-15 86.7 89 55.1
vmacro04822 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 3.2e-14 83.6 74 58.1
Cre11.g469450 Chlamydomonas reinhardtii HOM05D005445 ORTHO05D007043 7.8e-13 79.0 377 23.6
HanXRQChr09g0242991 Helianthus annuus HOM05D005445 ORTHO05D007043 5.3e-09 66.2 85 48.2
Lalb_Chr05g0223801 Lupinus albus HOM05D005445 ORTHO05D007043 4.5e-08 63.2 62 59.7
SHI03135 Sapria himalayana HOM05D005445 ORTHO05D007043 4.9e-07 59.7 56 62.5
Potri.003G027520 Populus trichocarpa HOM05D005445 ORTHO05D007043 4.2e-06 56.6 49 55.1


User provided reference genes

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