Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62025863 Chenopodium quinoa HOM05D006589 ORTHO05D008350 0.0e+00 1241.9 613 100.0
EL10As4g23464 Beta vulgaris HOM05D006589 ORTHO05D008350 1.6e-298 1028.9 682 77.1
AUR62029828 Chenopodium quinoa HOM05D006589 ORTHO05D008350 6.0e-277 957.2 553 87.9
Sc22g0004160 Simmondsia chinensis HOM05D006589 ORTHO05D008350 1.4e-262 909.4 673 70.0
Hund02417 Selenicereus undatus HOM05D006589 ORTHO05D008350 3.6e-253 878.2 683 66.9
Dinv04849 Davidia involucrata HOM05D006589 ORTHO05D008350 4.7e-253 877.9 685 66.4
Thecc.03G124600 Theobroma cacao HOM05D006589 ORTHO05D008350 1.7e-247 859.4 679 64.8
ClCG06G017720 Citrullus lanatus HOM05D006589 ORTHO05D008350 2.2e-247 859.0 610 70.0
CsaV3_1G000740 Cucumis sativus L. HOM05D006589 ORTHO05D008350 3.6e-245 851.7 628 68.6
Nitab4.5_0005327g0070 Nicotiana tabacum HOM05D006589 ORTHO05D008350 4.7e-245 851.3 683 64.6
Peaxi162Scf00089g00326 Petunia axillaris HOM05D006589 ORTHO05D008350 8.0e-245 850.5 657 67.1
CSS0007976 Camellia sinensis var. sinensis HOM05D006589 ORTHO05D008350 1.8e-244 849.4 673 65.1
THA.LOC104798952 Tarenaya hassleriana HOM05D006589 ORTHO05D008350 2.0e-243 845.9 677 65.0
TAR622G1334 Trochodendron aralioides HOM05D006589 ORTHO05D008350 2.6e-243 845.5 658 65.8
Eucgr.B00143 Eucalyptus grandis HOM05D006589 ORTHO05D008350 4.4e-243 844.7 634 66.2
Gohir.D07G057600 Gossypium hirsutum HOM05D006589 ORTHO05D008350 1.7e-242 842.8 684 63.9
Gohir.A07G053200 Gossypium hirsutum HOM05D006589 ORTHO05D008350 4.8e-242 841.3 684 63.7
COL.COLO4_16830 Corchorus olitorius HOM05D006589 ORTHO05D008350 4.1e-241 838.2 689 63.6
Actinidia36794 Actinidia chinensis HOM05D006589 ORTHO05D008350 1.2e-240 836.6 672 64.0
Nitab4.5_0001664g0100 Nicotiana tabacum HOM05D006589 ORTHO05D008350 1.2e-240 836.6 684 63.9
Cfa018872 Carpinus fangiana HOM05D006589 ORTHO05D008350 1.6e-240 836.3 685 64.4
Atru.chr9.1023 Acer truncatum HOM05D006589 ORTHO05D008350 3.5e-240 835.1 618 67.8
Prupe.5G155500 Prunus persica HOM05D006589 ORTHO05D008350 7.7e-240 833.9 671 64.5
Ah.02g115320 Amaranthus hybridus HOM05D006589 ORTHO05D008350 2.9e-239 832.0 630 70.5
PGR083G2113 Punica granatum HOM05D006589 ORTHO05D008350 1.5e-238 829.7 687 62.2
Sabra15G0113500 Salix brachista HOM05D006589 ORTHO05D008350 1.5e-238 829.7 632 65.7
FvH4_5g07670 Fragaria vesca HOM05D006589 ORTHO05D008350 3.2e-238 828.6 670 64.5
MD14G1162400 Malus domestica HOM05D006589 ORTHO05D008350 3.2e-238 828.6 635 66.6
Manes.14G054400 Manihot esculenta HOM05D006589 ORTHO05D008350 5.5e-238 827.8 638 65.7
Potri.015G091700 Populus trichocarpa HOM05D006589 ORTHO05D008350 7.2e-238 827.4 631 65.5
Haze_07256 Corylus avellana HOM05D006589 ORTHO05D008350 1.6e-237 826.2 687 63.8
FAN18G3475 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.8e-236 822.8 670 64.2
CANSAT80G0035 Cannabis sativa HOM05D006589 ORTHO05D008350 4.0e-236 821.6 632 65.7
Ciclev10019152m.g Citrus clementina HOM05D006589 ORTHO05D008350 6.8e-236 820.8 636 66.0
Glyma.04G193700 Glycine max HOM05D006589 ORTHO05D008350 1.2e-235 820.1 632 65.3
Gorai.001G061100 Gossypium raimondii HOM05D006589 ORTHO05D008350 1.5e-235 819.7 680 62.8
QL10p004744 Quercus lobata HOM05D006589 ORTHO05D008350 3.4e-235 818.5 697 62.1
Nn4g22414 Nelumbo nucifera HOM05D006589 ORTHO05D008350 7.5e-235 817.4 632 64.7
FAN13G0522 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.3e-234 816.6 669 64.0
FAN08G0518 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.8e-233 812.8 664 63.9
PGSC0003DMG400015251 Solanum tuberosum HOM05D006589 ORTHO05D008350 2.4e-233 812.4 652 64.3
Migut.I00491 Erythranthe guttata HOM05D006589 ORTHO05D008350 3.1e-233 812.0 687 63.8
FAN04G1748 Fragaria x ananassa HOM05D006589 ORTHO05D008350 3.1e-233 812.0 670 63.4
Ca_15262_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 4.1e-233 811.6 632 65.2
Glyma.06G172400 Glycine max HOM05D006589 ORTHO05D008350 7.0e-233 810.8 629 65.3
PSO782G1921 Papaver somniferum HOM05D006589 ORTHO05D008350 7.0e-233 810.8 679 63.3
Sopen03g030220 Solanum pennellii HOM05D006589 ORTHO05D008350 7.0e-233 810.8 659 64.3
Solyc03g111050.3 Solanum lycopersicum HOM05D006589 ORTHO05D008350 1.2e-232 810.1 686 62.7
RcHm_v2.0_Chr7g0190801 Rosa chinensis HOM05D006589 ORTHO05D008350 1.7e-231 806.2 684 62.9
Sed0022036 Sechium edule HOM05D006589 ORTHO05D008350 2.9e-231 805.4 629 65.7
Duzib205G1155 Durio zibethinus HOM05D006589 ORTHO05D008350 2.1e-229 799.3 690 60.3
PSO063G3222 Papaver somniferum HOM05D006589 ORTHO05D008350 2.7e-229 798.9 684 62.0
Phvul.009G168200 Phaseolus vulgaris HOM05D006589 ORTHO05D008350 3.6e-229 798.5 631 63.4
Medtr3g075050 Medicago truncatula HOM05D006589 ORTHO05D008350 6.1e-229 797.7 646 63.0
Lj1g0010015 Lotus japonicus HOM05D006589 ORTHO05D008350 2.3e-228 795.8 680 61.6
SalBow5G0933 Salvia bowleyana HOM05D006589 ORTHO05D008350 3.0e-228 795.4 670 63.0
TWI23G0930 Tripterygium wilfordii HOM05D006589 ORTHO05D008350 1.2e-227 793.5 632 62.7
SalBow5G1883 Salvia bowleyana HOM05D006589 ORTHO05D008350 1.5e-227 793.1 669 62.8
Lalb_Chr11g0069681 Lupinus albus HOM05D006589 ORTHO05D008350 3.4e-227 792.0 690 61.4
Aqoxy5G03523 Aquilegia oxysepala HOM05D006589 ORTHO05D008350 5.7e-227 791.2 686 60.9
DCAR_007473 Daucus carota HOM05D006589 ORTHO05D008350 2.2e-226 789.3 666 62.0
arahy.Tifrunner.gnm1.ann1.DGQ22E Arachis hypogaea HOM05D006589 ORTHO05D008350 2.8e-226 788.9 672 61.3
Psat5g140160 Pisum sativum HOM05D006589 ORTHO05D008350 4.9e-226 788.1 632 63.3
CARHR157250 Cardamine hirsuta HOM05D006589 ORTHO05D008350 1.4e-225 786.6 633 63.3
arahy.Tifrunner.gnm1.ann1.RTQA9M Arachis hypogaea HOM05D006589 ORTHO05D008350 7.0e-225 784.3 672 61.2
Carub.0005s1468 Capsella rubella HOM05D006589 ORTHO05D008350 7.0e-225 784.3 626 64.1
Sp5g13530 Schrenkiella parvula HOM05D006589 ORTHO05D008350 3.5e-224 781.9 666 61.3
BcaC09g49867 Brassica carinata HOM05D006589 ORTHO05D008350 7.7e-224 780.8 648 62.3
AL5G27930 Arabidopsis lyrata HOM05D006589 ORTHO05D008350 3.8e-223 778.5 630 63.2
HanXRQChr05g0158451 Helianthus annuus HOM05D006589 ORTHO05D008350 3.8e-223 778.5 658 61.7
C01p32170 Brassica napus HOM05D006589 ORTHO05D008350 5.0e-223 778.1 648 62.0
TPR.G26148 Trifolium pratense HOM05D006589 ORTHO05D008350 6.6e-223 777.7 661 61.3
Thhalv10010171m.g Eutrema salsugineum HOM05D006589 ORTHO05D008350 1.5e-222 776.5 633 63.3
BolC1t03137H Brassica oleracea HOM05D006589 ORTHO05D008350 1.9e-222 776.2 648 62.0
BcaB05g23014 Brassica carinata HOM05D006589 ORTHO05D008350 2.5e-222 775.8 646 62.1
BraA01t02452Z Brassica rapa HOM05D006589 ORTHO05D008350 9.5e-222 773.9 647 61.8
A01p25610 Brassica napus HOM05D006589 ORTHO05D008350 4.7e-221 771.5 647 61.7
Lsat_1_v5_gn_5_13320 Lactuca sativa HOM05D006589 ORTHO05D008350 4.0e-220 768.5 651 59.8
Aa31LG4G17110 Aethionema arabicum HOM05D006589 ORTHO05D008350 6.8e-220 767.7 672 59.8
Cpa.g.sc4.99 Carica papaya HOM05D006589 ORTHO05D008350 7.0e-217 757.7 674 60.4
ECA246G1540 Erigeron canadensis HOM05D006589 ORTHO05D008350 9.2e-217 757.3 613 63.5
Lj5A99T74 Lonicera japonica HOM05D006589 ORTHO05D008350 2.9e-215 752.3 707 57.7
CDE02G2664 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 1.2e-213 746.9 626 61.0
GSVIVG01008490001 Vitis vinifera HOM05D006589 ORTHO05D008350 1.2e-213 746.9 556 67.3
MELO3C026221.2 Cucumis melo HOM05D006589 ORTHO05D008350 8.9e-212 740.7 750 54.3
AT3G48500 Arabidopsis thaliana HOM05D006589 ORTHO05D008350 1.4e-209 733.4 662 58.8
MBI08_g33782_MAGBIO Magnolia biondii HOM05D006589 ORTHO05D008350 1.2e-205 720.3 680 56.8
CAN.G352.47 Capsicum annuum HOM05D006589 ORTHO05D008350 2.0e-203 713.0 557 65.4
Rhsim12G0172500 Rhododendron simsii HOM05D006589 ORTHO05D008350 5.4e-201 704.9 690 55.5
Cc04_g10160 Coffea canephora HOM05D006589 ORTHO05D008350 1.9e-198 696.4 564 63.8
vmacro16654 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 2.1e-189 666.4 812 48.6
HPP92_003572 Vanilla planifolia HOM05D006589 ORTHO05D008350 4.7e-189 665.2 622 55.9
SGA_v2.0_scaffold161G37820 Striga asiatica HOM05D006589 ORTHO05D008350 2.4e-185 652.9 583 61.7
CiPaw.12G036500 Carya illinoinensis HOM05D006589 ORTHO05D008350 1.6e-165 587.0 473 64.1
Zm00001eb365570 Zea mays HOM05D006589 ORTHO05D008350 5.5e-161 572.0 631 50.6
vmacro16714 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 3.7e-149 532.7 786 42.0
unitig_0.g1070 Utricularia gibba HOM05D006589 ORTHO05D008350 3.5e-131 473.0 348 69.5
Oeu006374.4 Olea europaea HOM05D006589 ORTHO05D000550 5.9e-123 445.7 424 56.8
ATR0060G001 Amborella trichopoda HOM05D006589 ORTHO05D008350 4.9e-109 399.4 350 60.3
Os01g0901900 Oryza sativa ssp. japonica HOM05D006589 ORTHO05D008350 2.0e-102 377.5 423 48.9
Mapoly0120s0021 Marchantia polymorpha HOM05D006589 ORTHO05D008350 1.7e-98 364.4 525 43.0
Ca_15265_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 3.9e-98 363.2 232 74.6
Pp3c18_13570 Physcomitrium patens HOM05D006589 ORTHO05D008350 8.9e-87 325.5 658 35.9
unitig_0.g1069 Utricularia gibba HOM05D006589 ORTHO05D008350 1.1e-79 302.0 263 60.8
ATR0686G112 Amborella trichopoda HOM05D006589 ORTHO05D008350 9.9e-78 295.4 225 64.9
FAN21G1369 Fragaria x ananassa HOM05D006589 ORTHO05D008350 4.1e-76 290.0 238 63.0
FAN21G3066 Fragaria x ananassa HOM05D006589 ORTHO05D008350 4.1e-76 290.0 238 63.0
SMO356G0597 Selaginella moellendorffii HOM05D006589 ORTHO05D008350 1.5e-62 245.0 555 33.5
RcHm_v2.0_Chr1g0380381 Rosa chinensis HOM05D006589 ORTHO05D008350 7.9e-59 232.6 159 73.6
HPP92_003575 Vanilla planifolia HOM05D006589 ORTHO05D008350 6.4e-53 213.0 239 49.8
FAN25G1587 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.6e-43 181.8 145 65.5
SEGI_40144 Sequoiadendron giganteum HOM05D006589 ORTHO05D008350 4.3e-41 173.7 225 44.0
CBR_g31403 Chara braunii HOM05D006589 ORTHO05D008350 5.9e-38 163.3 569 26.5
CDE09G0508 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 3.3e-33 147.5 124 57.3
arahy.Tifrunner.gnm1.ann1.Q1JBFY Arachis hypogaea HOM05D006589 ORTHO05D008350 4.8e-32 143.7 124 57.3
arahy.Tifrunner.gnm1.ann1.85RMBE Arachis hypogaea HOM05D006589 ORTHO05D008350 1.9e-28 131.7 142 51.4


User provided reference genes

Program Settings