Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62025197 Chenopodium quinoa HOM05D017700 ORTHO05D000088 6.4e-154 547.4 271 100.0
AUR62028980 Chenopodium quinoa HOM05D017700 ORTHO05D000088 3.1e-132 475.3 270 87.4
EL10Ac8g19103 Beta vulgaris HOM05D017700 ORTHO05D000088 1.4e-89 333.6 231 71.0
Ah.09g231430 Amaranthus hybridus HOM05D017700 ORTHO05D000088 3.1e-76 289.3 238 62.2
AUR62025199 Chenopodium quinoa HOM05D017700 ORTHO05D000088 1.1e-36 157.9 248 36.7
AUR62028979 Chenopodium quinoa HOM05D017700 ORTHO05D000088 2.1e-35 153.7 227 37.0
EL10Ac8g19102 Beta vulgaris HOM05D000823 ORTHO05D000088 2.8e-24 116.7 226 31.4
QL02p006491 Quercus lobata HOM05D000823 ORTHO05D000088 1.2e-19 101.3 274 29.6
MBI16_g31478_MAGBIO Magnolia biondii HOM05D000823 ORTHO05D000088 3.2e-12 76.6 225 25.8
Nn5g28071 Nelumbo nucifera HOM05D000823 ORTHO05D000088 3.2e-12 76.6 265 27.9
RcHm_v2.0_Chr1g0319011 Rosa chinensis HOM05D000823 ORTHO05D000088 1.2e-11 74.7 219 30.1
A09p56180 Brassica napus HOM05D002682 ORTHO05D002878 1.6e-11 74.3 224 24.1
CARHR117170 Cardamine hirsuta HOM05D000888 ORTHO05D011624 1.6e-11 74.3 224 26.3
Eucgr.D00269 Eucalyptus grandis HOM05D000395 ORTHO05D000088 1.6e-11 74.3 251 27.5
Eucgr.D00268 Eucalyptus grandis HOM05D000395 ORTHO05D000088 2.1e-11 73.9 255 27.1
MD11G1250800 Malus domestica HOM05D000823 ORTHO05D000088 2.7e-11 73.6 258 26.4
BolC8t51488H Brassica oleracea HOM05D000888 ORTHO05D002878 4.6e-11 72.8 228 23.2
Thhalv10000130m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 6.0e-11 72.4 218 24.8
AT2G24700 Arabidopsis thaliana HOM05D000888 ORTHO05D000740 1.3e-10 71.2 223 27.8
C08p39150 Brassica napus HOM05D000888 ORTHO05D002878 1.7e-10 70.9 211 24.6
BraA09t41014Z Brassica rapa HOM05D002682 ORTHO05D002878 1.7e-10 70.9 223 24.7
AT2G24680 Arabidopsis thaliana HOM05D000888 ORTHO05D000740 2.3e-10 70.5 266 23.3
PSO675G3530 Papaver somniferum HOM05D000395 ORTHO05D000088 2.3e-10 70.5 246 28.5
Atru.chr13.592 Acer truncatum HOM05D000823 ORTHO05D000088 3.0e-10 70.1 263 24.7
Prupe.4G178300 Prunus persica HOM05D000823 ORTHO05D000088 3.0e-10 70.1 254 28.0
AL4G15420 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 5.1e-10 69.3 220 25.5
BcaB01g02996 Brassica carinata HOM05D000888 ORTHO05D011624 5.1e-10 69.3 222 23.4
Cc08_g08270 Coffea canephora HOM05D000888 ORTHO05D000740 5.1e-10 69.3 190 32.1
Haze_24795 Corylus avellana HOM05D010270 ORTHO05D011987 5.1e-10 69.3 202 29.2
Gohir.A07G034736 Gossypium hirsutum HOM05D000888 ORTHO05D000740 5.1e-10 69.3 195 26.7
Gohir.D07G038300 Gossypium hirsutum HOM05D000888 ORTHO05D000740 5.1e-10 69.3 195 27.7
Gohir.A02G160733 Gossypium hirsutum HOM05D000823 ORTHO05D000088 6.6e-10 68.9 240 24.6
Gorai.001G040300 Gossypium raimondii HOM05D000888 ORTHO05D000740 6.6e-10 68.9 195 27.2
MD11G1251100 Malus domestica HOM05D000823 ORTHO05D000088 6.6e-10 68.9 264 25.8
Manes.03G005400 Manihot esculenta HOM05D000888 ORTHO05D000740 6.6e-10 68.9 210 27.6
A09p56140 Brassica napus HOM05D000888 ORTHO05D000740 8.7e-10 68.6 219 21.0
BraA09t41010Z Brassica rapa HOM05D000888 ORTHO05D000740 8.7e-10 68.6 219 21.0
Gohir.D03G019725 Gossypium hirsutum HOM05D000823 ORTHO05D010235 8.7e-10 68.6 240 24.6
Gorai.003G020600 Gossypium raimondii HOM05D000823 ORTHO05D010235 8.7e-10 68.6 240 24.6
BcaC07g40911 Brassica carinata HOM05D000888 ORTHO05D011624 1.1e-09 68.2 219 21.5
C08p39110 Brassica napus HOM05D000888 ORTHO05D000740 1.1e-09 68.2 219 21.5
CAN.G322.81 Capsicum annuum HOM05D000395 ORTHO05D002065 1.5e-09 67.8 252 25.0
Aqoxy6G00930 Aquilegia oxysepala HOM05D000823 ORTHO05D000088 1.9e-09 67.4 220 25.9
Thhalv10000028m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 1.9e-09 67.4 230 23.5
FvH4_1g14670 Fragaria vesca HOM05D000395 ORTHO05D000088 1.9e-09 67.4 211 30.3
MD08G1039500 Malus domestica HOM05D000823 ORTHO05D000088 1.9e-09 67.4 85 40.0
Peaxi162Scf00045g01642 Petunia axillaris HOM05D000888 ORTHO05D000740 1.9e-09 67.4 229 23.1
MD11G1251200 Malus domestica HOM05D000823 ORTHO05D000088 4.3e-09 66.2 256 27.0
BraA09t41009Z Brassica rapa HOM05D000888 ORTHO05D000740 9.6e-09 65.1 218 23.4
FvH4_2g40960 Fragaria vesca HOM05D000823 ORTHO05D000088 9.6e-09 65.1 205 24.9
Thhalv10000111m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 1.3e-08 64.7 206 22.8
MD03G1230200 Malus domestica HOM05D000823 ORTHO05D000088 1.3e-08 64.7 242 23.6
A04p19010 Brassica napus HOM05D000888 ORTHO05D000740 1.6e-08 64.3 218 20.6
CAN.G137.57 Capsicum annuum HOM05D000888 ORTHO05D000740 1.6e-08 64.3 249 25.7
PSO675G6904 Papaver somniferum HOM05D000395 ORTHO05D000088 1.6e-08 64.3 203 27.6
C04p54320 Brassica napus HOM05D000888 ORTHO05D000740 2.1e-08 63.9 218 21.6
Oeu064570.1 Olea europaea HOM05D000888 ORTHO05D000740 3.6e-08 63.2 197 28.9
PSO675G8304 Papaver somniferum HOM05D000395 ORTHO05D000088 3.6e-08 63.2 235 22.1
Prupe.4G178400 Prunus persica HOM05D000823 ORTHO05D000088 3.6e-08 63.2 229 25.3
C03p20850 Brassica napus HOM05D000888 ORTHO05D000740 4.8e-08 62.8 223 22.9
BolC4t26975H Brassica oleracea HOM05D000888 ORTHO05D000740 4.8e-08 62.8 220 22.7
Solyc08g006190.3 Solanum lycopersicum HOM05D000888 ORTHO05D000740 4.8e-08 62.8 220 23.6
BolC4t26977H Brassica oleracea HOM05D000888 ORTHO05D011624 6.2e-08 62.4 217 25.3
CSS0024635 Camellia sinensis var. sinensis HOM05D009784 ORTHO05D010235 6.2e-08 62.4 206 25.2
FAN20G0318 Fragaria x ananassa HOM05D000823 ORTHO05D000088 6.2e-08 62.4 205 25.4
CAN.G757.4 Capsicum annuum HOM05D000888 ORTHO05D000740 8.1e-08 62.0 218 23.4
BcaC07g40916 Brassica carinata HOM05D000888 ORTHO05D011624 1.1e-07 61.6 226 20.4
Prupe.4G178100 Prunus persica HOM05D000823 ORTHO05D000088 1.1e-07 61.6 79 38.0
Hund06201 Selenicereus undatus HOM05D000823 ORTHO05D000088 1.1e-07 61.6 220 28.6
C04p54310 Brassica napus HOM05D000888 ORTHO05D000740 1.4e-07 61.2 219 21.9
BolC4t26976H Brassica oleracea HOM05D000888 ORTHO05D000740 1.4e-07 61.2 219 21.9
FAN26G1384 Fragaria x ananassa HOM05D000395 ORTHO05D000088 1.4e-07 61.2 225 27.1
SGA_v2.0_scaffold110G31276 Striga asiatica HOM05D000888 ORTHO05D000740 1.4e-07 61.2 238 23.9
Thecc.09G009500 Theobroma cacao HOM05D000888 ORTHO05D000740 1.4e-07 61.2 207 25.6
ECA234G3336 Erigeron canadensis HOM05D000015 ORTHO05D000270 1.8e-07 60.8 242 23.6
Thhalv10000515m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 1.8e-07 60.8 208 23.1
BcaC01g04888 Brassica carinata HOM05D000888 ORTHO05D011624 2.4e-07 60.5 227 19.8
C03p32620 Brassica napus HOM05D000888 ORTHO05D011624 2.4e-07 60.5 227 19.8
FAN28G0564 Fragaria x ananassa HOM05D000395 ORTHO05D000088 2.4e-07 60.5 211 27.0
Hund21702 Selenicereus undatus HOM05D026165 ORTHO05D024989 2.4e-07 60.5 70 40.0
BolC3t15600H Brassica oleracea HOM05D000888 ORTHO05D011624 3.1e-07 60.1 233 22.7
CARHR117190 Cardamine hirsuta HOM05D000888 ORTHO05D000740 3.1e-07 60.1 234 23.1
Prupe.4G178200 Prunus persica HOM05D000823 ORTHO05D000088 3.1e-07 60.1 83 37.3
Actinidia06436 Actinidia chinensis HOM05D000888 ORTHO05D000740 4.0e-07 59.7 226 26.1
AT2G24650 Arabidopsis thaliana HOM05D000888 ORTHO05D000740 4.0e-07 59.7 189 25.9
BcaB01g02994 Brassica carinata HOM05D000888 ORTHO05D011624 4.0e-07 59.7 227 20.3
Manes.18G026450 Manihot esculenta HOM05D000888 ORTHO05D000740 4.0e-07 59.7 223 26.9
Peaxi162Scf00045g01644 Petunia axillaris HOM05D000180 ORTHO05D000740 4.0e-07 59.7 195 24.1
Actinidia12967 Actinidia chinensis HOM05D008110 ORTHO05D000088 5.3e-07 59.3 243 25.9
BcaC05g26398 Brassica carinata HOM05D000888 ORTHO05D000740 5.3e-07 59.3 230 22.6
BolC5t31165H Brassica oleracea HOM05D000888 ORTHO05D000740 5.3e-07 59.3 266 22.6
BraA03t15133Z Brassica rapa HOM05D000888 ORTHO05D000740 5.3e-07 59.3 198 27.3
BcaB01g02993 Brassica carinata HOM05D000888 ORTHO05D011624 6.9e-07 58.9 227 20.7
Carub.0004s0409 Capsella rubella HOM05D000888 ORTHO05D000740 6.9e-07 58.9 207 22.2
BraA04t17501Z Brassica rapa HOM05D000888 ORTHO05D000740 9.0e-07 58.5 218 20.2
PGSC0003DMG402009541 Solanum tuberosum HOM05D000888 ORTHO05D000740 9.0e-07 58.5 222 25.2
TAR625G0462 Trochodendron aralioides HOM05D000823 ORTHO05D000088 9.0e-07 58.5 94 34.0
A03p27150 Brassica napus HOM05D000888 ORTHO05D011624 1.2e-06 58.2 231 21.2
FvH4_3g19710 Fragaria vesca HOM05D000823 ORTHO05D000088 1.2e-06 58.2 229 24.5
FAN11G2176 Fragaria x ananassa HOM05D000823 ORTHO05D000088 1.2e-06 58.2 229 24.5
FAN18G2538 Fragaria x ananassa HOM05D000823 ORTHO05D000088 1.2e-06 58.2 87 35.6
Nitab4.5_0000806g0010 Nicotiana tabacum HOM05D000395 ORTHO05D000088 1.2e-06 58.2 229 26.2
Prupe.1G388000 Prunus persica HOM05D000823 ORTHO05D000088 1.2e-06 58.2 76 32.9
COL.COLO4_11742 Corchorus olitorius HOM05D000395 ORTHO05D000088 1.5e-06 57.8 75 40.0
Migut.D01642 Erythranthe guttata HOM05D000888 ORTHO05D000740 1.5e-06 57.8 85 35.3
Lj1g0013794 Lotus japonicus HOM05D000395 ORTHO05D000088 1.5e-06 57.8 209 23.4
MD03G1230100 Malus domestica HOM05D000823 ORTHO05D000088 1.5e-06 57.8 80 37.5
Manes.13G130800 Manihot esculenta HOM05D000823 ORTHO05D000088 1.5e-06 57.8 219 23.7
THA.LOC104803628 Tarenaya hassleriana HOM05D000888 ORTHO05D000740 1.5e-06 57.8 186 25.3
Sc07g0007340 Simmondsia chinensis HOM05D000888 ORTHO05D000740 2.0e-06 57.4 213 29.6
Sopen08g002220 Solanum pennellii HOM05D000888 ORTHO05D000740 2.0e-06 57.4 210 26.2
AL4G15350 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 2.6e-06 57.0 215 20.9
BcaB06g27991 Brassica carinata HOM05D000888 ORTHO05D000740 2.6e-06 57.0 222 24.3
BcaNung01507 Brassica carinata HOM05D000888 ORTHO05D000740 2.6e-06 57.0 199 25.6
C07p58840 Brassica napus HOM05D000888 ORTHO05D000740 2.6e-06 57.0 199 25.6
FvH4_5g30470 Fragaria vesca HOM05D000823 ORTHO05D000088 2.6e-06 57.0 87 35.6
Gorai.003G020700 Gossypium raimondii HOM05D000823 ORTHO05D000088 2.6e-06 57.0 241 24.9
TWI09G0341 Tripterygium wilfordii HOM05D000395 ORTHO05D000088 2.6e-06 57.0 221 24.0
arahy.Tifrunner.gnm1.ann1.K3F6Y2 Arachis hypogaea HOM05D000823 ORTHO05D000088 3.4e-06 56.6 233 23.2
BolC8t51483H Brassica oleracea HOM05D000888 ORTHO05D000740 3.4e-06 56.6 89 33.7
Peaxi162Scf00045g01638 Petunia axillaris HOM05D000888 ORTHO05D000740 3.4e-06 56.6 240 27.1
Prupe.7G143800 Prunus persica HOM05D000395 ORTHO05D000088 3.4e-06 56.6 224 23.2
RcHm_v2.0_Chr7g0224941 Rosa chinensis HOM05D000823 ORTHO05D000088 3.4e-06 56.6 81 35.8
AL4G15670 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 4.5e-06 56.2 209 23.4
BcaC02g08431 Brassica carinata HOM05D000888 ORTHO05D000740 4.5e-06 56.2 200 21.5
TWI63G1187 Tripterygium wilfordii HOM05D000888 ORTHO05D000740 4.5e-06 56.2 223 25.1
AL4G15380 Arabidopsis lyrata HOM05D000888 ORTHO05D011624 5.8e-06 55.8 237 21.9
CAN.G137.56 Capsicum annuum HOM05D000888 ORTHO05D000740 5.8e-06 55.8 208 26.0
Haze_08008 Corylus avellana HOM05D000823 ORTHO05D000088 5.8e-06 55.8 233 24.5
Duzib132G0290 Durio zibethinus HOM05D000395 ORTHO05D000088 5.8e-06 55.8 67 43.3
Medtr4g068320 Medicago truncatula HOM05D000395 ORTHO05D000088 5.8e-06 55.8 104 33.7
Nn5g29401 Nelumbo nucifera HOM05D000823 ORTHO05D000088 5.8e-06 55.8 93 34.4
Nitab4.5_0010282g0020 Nicotiana tabacum HOM05D000888 ORTHO05D000740 5.8e-06 55.8 205 26.3
Prupe.4G206300 Prunus persica HOM05D000823 ORTHO05D000088 5.8e-06 55.8 80 36.2
Thecc.02G092500 Theobroma cacao HOM05D000395 ORTHO05D000088 5.8e-06 55.8 73 39.7
AL4G15540 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 7.6e-06 55.5 222 21.6
FAN04G2451 Fragaria x ananassa HOM05D000823 ORTHO05D000088 7.6e-06 55.5 80 36.2
Nn6g32142 Nelumbo nucifera HOM05D000823 ORTHO05D000088 7.6e-06 55.5 78 38.5
Prupe.6G229600 Prunus persica HOM05D000395 ORTHO05D000088 7.6e-06 55.5 134 31.3
Actinidia36524 Actinidia chinensis HOM05D001349 ORTHO05D001980 9.9e-06 55.1 85 35.3
AUR62002338 Chenopodium quinoa HOM05D000888 ORTHO05D000740 9.9e-06 55.1 196 26.0
PGSC0003DMG403024846 Solanum tuberosum HOM05D000888 ORTHO05D000740 9.9e-06 55.1 190 23.2
Thecc.02G092700 Theobroma cacao HOM05D000395 ORTHO05D000088 9.9e-06 55.1 59 45.8


User provided reference genes

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