Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62024451 Chenopodium quinoa HOM05D005933 ORTHO05D007366 0.0e+00 1118.6 560 100.0
AUR62026040 Chenopodium quinoa HOM05D005933 ORTHO05D007366 1.9e-237 825.9 494 85.8
EL10Ac3g07091 Beta vulgaris HOM05D005933 ORTHO05D007366 2.3e-198 696.0 503 74.2
Ah.13g075070 Amaranthus hybridus HOM05D005933 ORTHO05D007366 6.9e-179 631.3 483 67.5
Hund05286 Selenicereus undatus HOM05D005933 ORTHO05D007366 2.2e-161 573.2 484 62.8
Haze_19854 Corylus avellana HOM05D005933 ORTHO05D007366 4.7e-143 512.3 485 57.3
GSVIVG01033275001 Vitis vinifera HOM05D005933 ORTHO05D007366 3.4e-141 506.1 501 54.3
Actinidia09329 Actinidia chinensis HOM05D005933 ORTHO05D007366 1.0e-137 494.6 491 54.8
Actinidia39225 Actinidia chinensis HOM05D005933 ORTHO05D007366 7.3e-136 488.4 491 55.2
Lju124A41G42 Lonicera japonica HOM05D005933 ORTHO05D007366 1.4e-134 484.2 473 55.4
Hma1.2p1_2002F.1_g310760 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 2.3e-134 483.4 487 54.2
FAN05G5216 Fragaria x ananassa HOM05D005933 ORTHO05D007366 4.0e-134 482.6 494 53.4
Phvul.001G132100 Phaseolus vulgaris HOM05D005933 ORTHO05D007366 6.8e-134 481.9 495 53.1
Glyma.03G136900 Glycine max HOM05D005933 ORTHO05D007366 5.8e-133 478.8 494 53.0
arahy.Tifrunner.gnm1.ann1.EHL0AN Arachis hypogaea HOM05D005933 ORTHO05D007366 9.8e-133 478.0 494 53.0
FAN02G2268 Fragaria x ananassa HOM05D005933 ORTHO05D007366 1.7e-132 477.2 494 53.2
arahy.Tifrunner.gnm1.ann1.T110QE Arachis hypogaea HOM05D005933 ORTHO05D007366 6.4e-132 475.3 494 52.6
Lalb_Chr25g0287121 Lupinus albus HOM05D005933 ORTHO05D007366 8.3e-132 474.9 495 52.9
Lj1g0013042 Lotus japonicus HOM05D005933 ORTHO05D007366 4.1e-131 472.6 487 52.4
CiPaw.08G166600 Carya illinoinensis HOM05D005933 ORTHO05D007366 7.0e-131 471.9 497 51.7
Sabra06G0036000 Salix brachista HOM05D005933 ORTHO05D007366 3.5e-130 469.5 484 52.9
QL07p000555 Quercus lobata HOM05D005933 ORTHO05D007366 7.8e-130 468.4 495 52.3
FvH4_6g23820 Fragaria vesca HOM05D005933 ORTHO05D007366 1.3e-129 467.6 494 52.4
Rhsim03G0021100 Rhododendron simsii HOM05D005933 ORTHO05D007366 1.7e-129 467.2 506 50.8
FAN14G1069 Fragaria x ananassa HOM05D005933 ORTHO05D007366 3.0e-129 466.5 484 52.9
Rhsim03G0022400 Rhododendron simsii HOM05D005933 ORTHO05D007366 1.1e-128 464.5 512 51.6
Ca_08457_v3 Cicer arietinum L. HOM05D005933 ORTHO05D007366 1.5e-128 464.2 497 51.7
TWI74G0083 Tripterygium wilfordii HOM05D005933 ORTHO05D007366 1.5e-128 464.2 497 50.7
Oeu017944.1 Olea europaea HOM05D005933 ORTHO05D007366 1.9e-128 463.8 498 52.0
Ciclev10004945m.g Citrus clementina HOM05D005933 ORTHO05D007366 3.3e-128 463.0 480 51.9
Eucgr.A02347 Eucalyptus grandis HOM05D005933 ORTHO05D007366 3.3e-128 463.0 482 52.5
RcHm_v2.0_Chr3g0482381 Rosa chinensis HOM05D005933 ORTHO05D007366 4.3e-128 462.6 500 51.4
Duzib093G2041 Durio zibethinus HOM05D005933 ORTHO05D007366 5.6e-128 462.2 495 49.9
CANSAT78G0457 Cannabis sativa HOM05D005933 ORTHO05D007366 7.3e-128 461.8 452 53.8
QL07p000522 Quercus lobata HOM05D005933 ORTHO05D007366 7.3e-128 461.8 495 51.3
vmacro07854 Vaccinium macrocarpon HOM05D005933 ORTHO05D007366 7.3e-128 461.8 517 49.9
MD12G1074000 Malus domestica HOM05D005933 ORTHO05D007366 1.2e-127 461.1 451 53.7
CSS0022562 Camellia sinensis var. sinensis HOM05D005933 ORTHO05D007366 1.6e-127 460.7 485 53.0
Thecc.05G153300 Theobroma cacao HOM05D005933 ORTHO05D007366 1.6e-127 460.7 496 51.2
Solyc10g080110.3 Solanum lycopersicum HOM05D005933 ORTHO05D007366 1.1e-126 458.0 509 48.3
Sopen10g030730 Solanum pennellii HOM05D005933 ORTHO05D007366 1.8e-126 457.2 510 47.8
Psat3g072720 Pisum sativum HOM05D005933 ORTHO05D007366 2.3e-126 456.8 474 52.5
Medtr7g091500 Medicago truncatula HOM05D005933 ORTHO05D007366 5.2e-126 455.7 495 50.5
THA.LOC104811196 Tarenaya hassleriana HOM05D005933 ORTHO05D007366 5.2e-126 455.7 494 50.2
Nitab4.5_0009442g0020 Nicotiana tabacum HOM05D005933 ORTHO05D007366 1.2e-125 454.5 527 48.2
PGSC0003DMG400023688 Solanum tuberosum HOM05D005933 ORTHO05D007366 1.2e-125 454.5 512 47.9
Gorai.007G186200 Gossypium raimondii HOM05D005933 ORTHO05D007366 3.4e-125 453.0 496 50.0
Manes.09G022000 Manihot esculenta HOM05D005933 ORTHO05D007366 3.4e-125 453.0 493 51.3
Gohir.D11G173800 Gossypium hirsutum HOM05D005933 ORTHO05D007366 4.4e-125 452.6 496 50.0
Potri.006G051300 Populus trichocarpa HOM05D005933 ORTHO05D007366 4.4e-125 452.6 487 50.9
SalBow6G0452 Salvia bowleyana HOM05D005933 ORTHO05D007366 2.2e-124 450.3 513 51.3
DCAR_009061 Daucus carota HOM05D005933 ORTHO05D007366 2.9e-124 449.9 507 49.3
Thhalv10025158m.g Eutrema salsugineum HOM05D005933 ORTHO05D007366 3.7e-124 449.5 507 49.5
Cc06_g17560 Coffea canephora HOM05D005933 ORTHO05D007366 8.3e-124 448.4 522 49.4
COL.COLO4_28284 Corchorus olitorius HOM05D005933 ORTHO05D007366 8.3e-124 448.4 495 49.5
Dinv39604 Davidia involucrata HOM05D005933 ORTHO05D007366 8.3e-124 448.4 432 57.2
PGR004G0721 Punica granatum HOM05D005933 ORTHO05D007366 8.3e-124 448.4 512 49.4
MSTRG.19860 Avicennia marina HOM05D005933 ORTHO05D007366 1.4e-123 447.6 512 51.4
HanXRQChr09g0252561 Helianthus annuus HOM05D005933 ORTHO05D007366 1.4e-123 447.6 484 51.9
Sed0001053 Sechium edule HOM05D005933 ORTHO05D007366 3.2e-123 446.4 497 51.5
C01p02220 Brassica napus HOM05D005933 ORTHO05D007366 4.1e-123 446.0 496 48.8
Lsat_1_v5_gn_8_81281 Lactuca sativa HOM05D005933 ORTHO05D007366 5.4e-123 445.7 489 51.3
Nitab4.5_0008648g0010 Nicotiana tabacum HOM05D005933 ORTHO05D007366 1.2e-122 444.5 509 48.5
VMungo1383G3081 Vigna mungo HOM05D005933 ORTHO05D007366 2.0e-122 443.7 596 44.5
BolC1t00214H Brassica oleracea HOM05D005933 ORTHO05D007366 2.7e-122 443.4 494 48.8
Carub.0007s0431 Capsella rubella HOM05D005933 ORTHO05D007366 4.6e-122 442.6 491 49.1
ECA236G1702 Erigeron canadensis HOM05D005933 ORTHO05D007366 7.8e-122 441.8 451 53.4
A01p02040 Brassica napus HOM05D005933 ORTHO05D007366 1.7e-121 440.7 494 49.0
Gohir.A11G167500 Gossypium hirsutum HOM05D005933 ORTHO05D007366 2.3e-121 440.3 496 48.8
AL7G15130 Arabidopsis lyrata HOM05D005933 ORTHO05D007366 3.0e-121 439.9 507 47.9
BraA01t00193Z Brassica rapa HOM05D005933 ORTHO05D007366 3.0e-121 439.9 494 49.0
Aa31LG6G13690 Aethionema arabicum HOM05D005933 ORTHO05D007366 1.1e-120 438.0 494 48.8
MELO3C009712.2 Cucumis melo HOM05D005933 ORTHO05D007366 1.5e-120 437.6 508 48.4
AT4G35910 Arabidopsis thaliana HOM05D005933 ORTHO05D007366 3.3e-120 436.4 494 49.4
CARHR244310 Cardamine hirsuta HOM05D005933 ORTHO05D007366 7.3e-120 435.3 474 50.6
Sp7g34530 Schrenkiella parvula HOM05D005933 ORTHO05D007366 1.6e-119 434.1 490 49.6
Cpa.g.sc92.52 Carica papaya HOM05D005933 ORTHO05D007366 2.8e-119 433.3 501 49.9
Peaxi162Scf00354g00225 Petunia axillaris HOM05D005933 ORTHO05D007366 2.8e-119 433.3 479 48.9
Migut.J01758 Erythranthe guttata HOM05D005933 ORTHO05D007366 3.6e-119 433.0 511 49.3
Peaxi162Scf00618g00022 Petunia axillaris HOM05D005933 ORTHO05D007366 3.6e-119 433.0 496 48.0
BcaNung03520 Brassica carinata HOM05D005933 ORTHO05D007366 3.1e-118 429.9 497 48.7
Cfa008569 Carpinus fangiana HOM05D005933 ORTHO05D007366 3.4e-117 426.4 358 60.9
SGA_v2.0_scaffold69G23116 Striga asiatica HOM05D005933 ORTHO05D007366 4.4e-117 426.0 515 48.7
CsaV3_3G039700 Cucumis sativus L. HOM05D005933 ORTHO05D007366 9.9e-117 424.9 510 47.5
ClCG10G016640 Citrullus lanatus HOM05D005933 ORTHO05D007366 2.9e-116 423.3 549 45.0
TPR.G854 Trifolium pratense HOM05D005933 ORTHO05D007366 1.9e-115 420.6 430 52.8
PSO782G3339 Papaver somniferum HOM05D005933 ORTHO05D007366 2.5e-112 410.2 501 46.9
Atru.chr1.1098 Acer truncatum HOM05D005933 ORTHO05D007366 7.3e-112 408.7 407 54.3
Hma1.2p1_2002F.1_g310770 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 7.3e-112 408.7 353 60.1
Aqoxy5G03564 Aquilegia oxysepala HOM05D005933 ORTHO05D007366 5.6e-104 382.5 485 46.8
MBI16_g31719_MAGBIO Magnolia biondii HOM05D005933 ORTHO05D007366 3.6e-103 379.8 485 45.6
CAN.G128.8 Capsicum annuum HOM05D005933 ORTHO05D007366 2.0e-101 374.0 353 53.5
Oeu008914.1 Olea europaea HOM05D005933 ORTHO05D007366 6.9e-94 349.0 356 53.4
Oeu008916.1 Olea europaea HOM05D005933 ORTHO05D007366 6.9e-94 349.0 356 53.4
ATR0686G233 Amborella trichopoda HOM05D005933 ORTHO05D007366 7.6e-93 345.5 494 42.5
unitig_749.g14146 Utricularia gibba HOM05D003650 ORTHO05D004213 6.4e-92 342.4 480 44.2
Os12g0588900 Oryza sativa ssp. japonica HOM05D005933 ORTHO05D007366 1.9e-91 340.9 454 44.3
Sc13g0001740 Simmondsia chinensis HOM05D005933 ORTHO05D007366 2.3e-89 334.0 313 56.2
Prupe.7G060900 Prunus persica HOM05D005933 ORTHO05D007366 3.3e-88 330.1 362 50.0
SEGI_18184 Sequoiadendron giganteum HOM05D005933 ORTHO05D007366 3.7e-87 326.6 515 39.2
SHI32975 Sapria himalayana HOM05D005933 ORTHO05D000023 5.8e-85 319.3 369 47.2
Zm00001eb135000 Zea mays HOM05D005933 ORTHO05D007366 2.5e-80 303.9 497 41.4
TAR633G2718 Trochodendron aralioides HOM05D005933 ORTHO05D007366 5.6e-80 302.8 242 62.4
CDE09G0169 Ceratophyllum demersum HOM05D005933 ORTHO05D007366 1.7e-76 291.2 259 59.1
HPP92_017763 Vanilla planifolia HOM05D005933 ORTHO05D007366 1.9e-75 287.7 363 44.4
Glyma.19G139200 Glycine max HOM05D005933 ORTHO05D007366 1.2e-69 268.5 256 55.9
Mapoly0165s0023 Marchantia polymorpha HOM05D005933 ORTHO05D007366 1.0e-65 255.4 512 34.0
BcaNung04276 Brassica carinata HOM05D005933 ORTHO05D007366 1.3e-63 248.4 439 38.5
Rhsim03G0020400 Rhododendron simsii HOM05D005933 ORTHO05D007366 3.1e-62 243.8 236 56.4
AagrBONN_evm.TU.Sc2ySwM_117.299 Anthoceros agrestis HOM05D005933 ORTHO05D007366 1.7e-60 238.0 448 36.6
SMO145G0218 Selaginella moellendorffii HOM05D005933 ORTHO05D007366 5.9e-53 213.0 384 38.5
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 1.3e-47 195.3 295 42.0
Sc13g0001730 Simmondsia chinensis HOM05D005933 ORTHO05D007366 9.1e-46 189.1 142 64.8
CDE02G1215 Ceratophyllum demersum HOM05D002948 ORTHO05D003577 6.7e-41 172.9 195 51.3
Pp3c14_19420 Physcomitrium patens HOM05D005933 ORTHO05D007366 2.0e-40 171.4 334 33.2
Atru.chr1.1100 Acer truncatum HOM05D005933 ORTHO05D007366 1.8e-38 164.9 173 51.4
C07p62070 Brassica napus HOM05D005933 ORTHO05D007366 1.3e-36 158.7 145 55.9
BolC7t46624H Brassica oleracea HOM05D005933 ORTHO05D007366 1.3e-36 158.7 145 55.9
CBR_g982 Chara braunii HOM05D005933 ORTHO05D007366 7.2e-35 152.9 231 40.7
Cfa017749 Carpinus fangiana HOM05D005933 ORTHO05D007366 2.0e-32 144.8 242 39.7
BcaNung03522 Brassica carinata HOM05D005933 ORTHO05D007366 5.4e-30 136.7 135 49.6
MD12G1074100 Malus domestica HOM05D005933 ORTHO05D007366 2.5e-27 127.9 154 45.5
TAR636G2120 Trochodendron aralioides HOM05D005933 ORTHO05D007366 1.6e-26 125.2 116 57.8
Cc06_g12380 Coffea canephora HOM05D005933 ORTHO05D007366 4.9e-23 113.6 191 40.8
TAR633G2604 Trochodendron aralioides HOM05D005933 ORTHO05D007366 2.4e-22 111.3 124 54.0
Cre01.g043500 Chlamydomonas reinhardtii HOM05D005933 ORTHO05D007366 1.6e-21 108.6 293 30.0
Nn8g40508 Nelumbo nucifera HOM05D005933 ORTHO05D007366 3.7e-15 87.4 67 62.7
Rhsim03G0024000 Rhododendron simsii HOM05D005933 ORTHO05D007366 1.6e-13 82.0 57 66.7
Rhsim03G0022600 Rhododendron simsii HOM05D005933 ORTHO05D007366 7.8e-13 79.7 53 69.8
Dinv12483 Davidia involucrata HOM05D005933 ORTHO05D007366 6.6e-12 76.6 100 47.0
Nn8g40507 Nelumbo nucifera HOM05D005933 ORTHO05D007366 2.6e-08 64.7 104 40.4
SHI32976 Sapria himalayana HOM05D000105 ORTHO05D000023 2.4e-06 58.2 89 37.1
AUR62041338 Chenopodium quinoa HOM05D007854 ORTHO05D003407 9.2e-06 56.2 30 93.3


User provided reference genes

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