Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62022021 Chenopodium quinoa HOM05D006314 ORTHO05D007970 2.0e-128 462.6 260 100.0
AUR62012635 Chenopodium quinoa HOM05D006314 ORTHO05D007970 3.0e-76 289.3 310 63.5
EL10Ac8g19905 Beta vulgaris HOM05D006314 ORTHO05D007970 1.8e-73 280.0 306 62.1
TWI38G0264 Tripterygium wilfordii HOM05D006314 ORTHO05D007970 2.0e-59 233.4 232 60.3
CiPaw.09G086300 Carya illinoinensis HOM05D006314 ORTHO05D007970 2.4e-57 226.5 303 47.9
Hund21374 Selenicereus undatus HOM05D006314 ORTHO05D007970 3.1e-57 226.1 222 66.2
Ah.14g088200 Amaranthus hybridus HOM05D006314 ORTHO05D007970 4.1e-57 225.7 242 63.6
CiPaw.09G085200 Carya illinoinensis HOM05D006314 ORTHO05D007970 1.7e-55 220.3 255 52.9
GSVIVG01012621001 Vitis vinifera HOM05D006314 ORTHO05D007970 9.7e-51 204.5 253 48.6
Prupe.4G027100 Prunus persica HOM05D006314 ORTHO05D007970 1.3e-50 204.1 227 55.1
QL05p075316 Quercus lobata HOM05D006314 ORTHO05D007970 2.8e-50 203.0 273 46.9
Cfa021643 Carpinus fangiana HOM05D006314 ORTHO05D007970 4.8e-50 202.2 255 53.3
Gohir.A06G145000 Gossypium hirsutum HOM05D006314 ORTHO05D007970 6.3e-50 201.8 263 46.0
Gorai.010G176200 Gossypium raimondii HOM05D006314 ORTHO05D007970 5.3e-49 198.7 275 46.2
Aqoxy5G01372 Aquilegia oxysepala HOM05D006314 ORTHO05D007970 2.6e-48 196.4 266 52.6
Manes.14G141100 Manihot esculenta HOM05D006314 ORTHO05D007970 5.9e-48 195.3 235 55.3
AL6G48810 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 1.7e-47 193.7 222 52.3
AL7G32880 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 2.9e-47 193.0 252 54.4
Potri.004G039400 Populus trichocarpa HOM05D006314 ORTHO05D007970 1.1e-46 191.0 239 49.4
Sabra04G0024200 Salix brachista HOM05D006314 ORTHO05D007970 1.5e-46 190.7 264 45.8
Nitab4.5_0000900g0100 Nicotiana tabacum HOM05D006314 ORTHO05D007970 2.5e-46 189.9 195 50.3
Haze_06726 Corylus avellana HOM05D006314 ORTHO05D007970 9.4e-46 188.0 288 45.5
AT4G05210 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 2.1e-45 186.8 231 56.7
A09p25520 Brassica napus HOM05D006314 ORTHO05D007970 2.7e-45 186.4 227 57.3
BcaC04g21385 Brassica carinata HOM05D006314 ORTHO05D007970 3.6e-45 186.0 227 56.8
C09p32430 Brassica napus HOM05D006314 ORTHO05D007970 3.6e-45 186.0 227 56.8
BolC9t56088H Brassica oleracea HOM05D006314 ORTHO05D007970 3.6e-45 186.0 227 56.8
Carub.0007s2019 Capsella rubella HOM05D006314 ORTHO05D007970 3.6e-45 186.0 264 51.9
CAN.G404.73 Capsicum annuum HOM05D006314 ORTHO05D007970 6.1e-45 185.3 233 51.5
Nitab4.5_0004428g0040 Nicotiana tabacum HOM05D006314 ORTHO05D007970 1.0e-44 184.5 193 50.8
AT4G21220 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 1.4e-44 184.1 258 53.1
BcaB01g01893 Brassica carinata HOM05D006314 ORTHO05D007970 1.4e-44 184.1 229 56.3
BraA09t38127Z Brassica rapa HOM05D006314 ORTHO05D007970 1.8e-44 183.7 227 56.4
MD05G1340500 Malus domestica HOM05D006314 ORTHO05D007970 1.8e-44 183.7 256 47.3
ECA236G4636 Erigeron canadensis HOM05D006314 ORTHO05D007970 4.0e-44 182.6 282 46.1
Duzib235G0913 Durio zibethinus HOM05D006314 ORTHO05D007970 6.7e-44 181.8 249 41.8
Nn1g03656 Nelumbo nucifera HOM05D006314 ORTHO05D007970 1.2e-43 181.0 243 51.4
Ciclev10018286m.g Citrus clementina HOM05D006314 ORTHO05D007970 1.5e-43 180.6 228 54.4
Solyc03g031560.4 Solanum lycopersicum HOM05D006314 ORTHO05D007970 5.7e-43 178.7 243 51.4
Cpa.g.sc81.24 Carica papaya HOM05D006314 ORTHO05D007970 1.3e-42 177.6 224 57.1
CsaV3_6G049280 Cucumis sativus L. HOM05D006314 ORTHO05D007970 3.7e-42 176.0 291 43.6
COL.COLO4_31719 Corchorus olitorius HOM05D006314 ORTHO05D007970 4.8e-42 175.6 274 43.4
ATR0618G448 Amborella trichopoda HOM05D006314 ORTHO05D007970 6.3e-42 175.3 282 45.0
Thhalv10025838m.g Eutrema salsugineum HOM05D006314 ORTHO05D007970 2.4e-41 173.3 257 50.2
Actinidia05538 Actinidia chinensis HOM05D006314 ORTHO05D007970 3.1e-41 172.9 250 53.2
DCAR_004187 Daucus carota HOM05D006314 ORTHO05D007970 3.1e-41 172.9 238 54.6
SGA_v2.0_scaffold7G03887 Striga asiatica HOM05D006314 ORTHO05D007970 3.1e-41 172.9 229 47.2
CANSAT56G1066 Cannabis sativa HOM05D006314 ORTHO05D007970 5.3e-41 172.2 253 51.4
Eucgr.D00832 Eucalyptus grandis HOM05D006314 ORTHO05D007970 2.0e-40 170.2 248 52.8
FAN21G1433 Fragaria x ananassa HOM05D006314 ORTHO05D007970 2.0e-40 170.2 241 51.5
SalBow8G4748 Salvia bowleyana HOM05D006314 ORTHO05D007970 2.7e-40 169.9 257 44.0
PGR031G0385 Punica granatum HOM05D006314 ORTHO05D007970 7.7e-40 168.3 262 50.0
CDE05G2602 Ceratophyllum demersum HOM05D006314 ORTHO05D007970 1.7e-39 167.2 246 52.0
Haze_06729 Corylus avellana HOM05D006314 ORTHO05D007970 1.5e-38 164.1 167 53.3
HanXRQChr05g0130041 Helianthus annuus HOM05D006314 ORTHO05D007970 1.5e-38 164.1 292 41.8
Actinidia26953 Actinidia chinensis HOM05D006314 ORTHO05D007970 4.2e-38 162.5 169 52.7
Phvul.002G049200 Phaseolus vulgaris HOM05D006314 ORTHO05D007970 4.2e-38 162.5 251 49.0
SEGI_37493 Sequoiadendron giganteum HOM05D006314 ORTHO05D007970 7.2e-38 161.8 281 39.1
ClCG01G022220 Citrullus lanatus HOM05D006314 ORTHO05D007970 9.4e-38 161.4 268 47.8
Lsat_1_v5_gn_7_17861 Lactuca sativa HOM05D006314 ORTHO05D007970 4.7e-37 159.1 307 39.1
RcHm_v2.0_Chr5g0004131 Rosa chinensis HOM05D006314 ORTHO05D007970 4.7e-37 159.1 240 50.4
Aa31LG9G9230 Aethionema arabicum HOM05D006314 ORTHO05D007970 1.0e-36 157.9 250 50.4
PSO541G6217 Papaver somniferum HOM05D006314 ORTHO05D007970 2.3e-36 156.8 251 39.8
FAN25G2977 Fragaria x ananassa HOM05D006314 ORTHO05D007970 3.0e-36 156.4 272 44.9
VMungo1215G0781 Vigna mungo HOM05D006314 ORTHO05D007970 3.0e-36 156.4 242 47.5
CARHR227820 Cardamine hirsuta HOM05D006314 ORTHO05D007970 4.0e-36 156.0 300 45.7
MELO3C007369.2 Cucumis melo HOM05D006314 ORTHO05D007970 5.2e-36 155.6 260 45.0
Lj1g0010466 Lotus japonicus HOM05D006314 ORTHO05D007970 5.2e-36 155.6 246 45.5
Migut.M01276 Erythranthe guttata HOM05D006314 ORTHO05D007970 1.2e-35 154.5 232 44.0
PSO675G3227 Papaver somniferum HOM05D006314 ORTHO05D007970 1.2e-35 154.5 277 37.5
vmacro03713 Vaccinium macrocarpon HOM05D006314 ORTHO05D007970 1.2e-35 154.5 199 57.8
FvH4_3g02730 Fragaria vesca HOM05D006314 ORTHO05D007970 2.6e-35 153.3 222 52.7
HPP92_009395 Vanilla planifolia HOM05D006314 ORTHO05D007970 5.7e-35 152.1 251 47.8
HPP92_009390 Vanilla planifolia HOM05D006314 ORTHO05D007970 7.5e-35 151.8 230 48.3
Glyma.01G240700 Glycine max HOM05D006314 ORTHO05D007970 9.8e-35 151.4 224 49.1
MBI02_g34312_MAGBIO Magnolia biondii HOM05D006314 ORTHO05D007970 9.8e-35 151.4 249 43.8
Oeu002711.1 Olea europaea HOM05D006314 ORTHO05D007970 3.7e-34 149.4 240 45.4
Rhsim13G0158200 Rhododendron simsii HOM05D006314 ORTHO05D007970 2.4e-33 146.7 288 45.8
Gohir.D06G151200 Gossypium hirsutum HOM05D006314 ORTHO05D007970 9.1e-33 144.8 206 41.7
Cc00_g17320 Coffea canephora HOM05D006314 ORTHO05D007970 2.7e-32 143.3 337 42.1
Sc05g0008810 Simmondsia chinensis HOM05D006314 ORTHO05D007970 4.5e-32 142.5 289 45.3
TPR.G10185 Trifolium pratense HOM05D006314 ORTHO05D007970 5.9e-32 142.1 223 43.5
Medtr7g047630 Medicago truncatula HOM05D006314 ORTHO05D007970 3.8e-31 139.4 235 40.4
Medtr7g451810 Medicago truncatula HOM05D006314 ORTHO05D007970 3.8e-31 139.4 235 40.4
Sed0025568 Sechium edule HOM05D006314 ORTHO05D007970 8.6e-31 138.3 283 40.3
Sopen03g005440 Solanum pennellii HOM05D006314 ORTHO05D007970 1.1e-30 137.9 247 45.7
THA.LOC104812945 Tarenaya hassleriana HOM05D006314 ORTHO05D007970 1.5e-30 137.5 250 48.0
Sp6g03780 Schrenkiella parvula HOM05D006314 ORTHO05D007970 1.9e-30 137.1 231 49.4
Lj1A1224T36 Lonicera japonica HOM05D006314 ORTHO05D007970 1.6e-29 134.0 216 47.2
Ca_07429_v3 Cicer arietinum L. HOM05D006314 ORTHO05D007970 2.8e-29 133.3 214 44.4
Mapoly0013s0096 Marchantia polymorpha HOM05D006314 ORTHO05D007970 8.0e-29 131.7 230 41.7
Lalb_Chr16g0376341 Lupinus albus HOM05D006314 ORTHO05D007970 2.0e-27 127.1 225 48.4
Zm00001eb306890 Zea mays HOM05D006314 ORTHO05D007970 2.0e-27 127.1 250 46.0
Thecc.06G213300 Theobroma cacao HOM05D006314 ORTHO05D007970 1.3e-26 124.4 226 42.9
Dinv17838 Davidia involucrata HOM05D006314 ORTHO05D007970 2.8e-26 123.2 151 62.9
Glyma.11G002900 Glycine max HOM05D006314 ORTHO05D007970 2.0e-24 117.1 135 52.6
CSS0018641 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 4.5e-24 115.9 106 74.5
Psat3g152680 Pisum sativum HOM05D006314 ORTHO05D007970 2.9e-23 113.2 147 59.2
MSTRG.16127 Avicennia marina HOM05D006314 ORTHO05D007970 6.6e-23 112.1 121 48.8
Nn5g27983 Nelumbo nucifera HOM05D006314 ORTHO05D007970 6.6e-23 112.1 102 52.9
TAR627G0699 Trochodendron aralioides HOM05D006314 ORTHO05D007970 8.6e-23 111.7 100 55.0
CBR_g20160 Chara braunii HOM05D006314 ORTHO05D007970 1.1e-22 111.3 176 36.4
arahy.Tifrunner.gnm1.ann1.937J55 Arachis hypogaea HOM05D006314 ORTHO05D007970 2.5e-22 110.2 215 47.0
arahy.Tifrunner.gnm1.ann1.PEH28W Arachis hypogaea HOM05D006314 ORTHO05D007970 2.5e-22 110.2 215 47.0
AagrBONN_evm.TU.Sc2ySwM_228.2540 Anthoceros agrestis HOM05D006314 ORTHO05D007970 3.3e-22 109.8 224 42.0
PGSC0003DMG400005049 Solanum tuberosum HOM05D006314 ORTHO05D007970 2.1e-21 107.1 210 46.2
unitig_748.g7139 Utricularia gibba HOM05D006350 ORTHO05D007850 2.3e-20 103.6 104 54.8
Hma1.2p1_0729F.1_g209630 Hydrangea macrophylla HOM05D006314 ORTHO05D007970 5.2e-20 102.4 197 36.0
Os07g0134400 Oryza sativa ssp. japonica HOM05D006314 ORTHO05D007970 1.2e-16 91.3 148 53.4
CSS0045332 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 2.5e-14 83.6 115 40.0
Pp3c4_25780 Physcomitrium patens HOM05D006314 ORTHO05D007970 4.3e-14 82.8 229 38.0
PRCOL_00005452 Prasinoderma coloniale HOM05D006314 ORTHO05D007970 7.5e-11 72.0 226 38.9
Sp7g19320 Schrenkiella parvula HOM05D006314 ORTHO05D007970 2.2e-10 70.5 105 41.0
SMO004G0010 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 2.2e-10 70.5 190 26.8
Lsat_1_v5_gn_5_88320 Lactuca sativa HOM05D006314 ORTHO05D007970 5.6e-06 55.8 85 36.5


User provided reference genes

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