Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62018448 Chenopodium quinoa HOM05D005962 ORTHO05D007325 3.5e-138 495.0 254 100.0
AUR62020986 Chenopodium quinoa HOM05D005962 ORTHO05D007325 4.3e-136 488.0 254 96.1
EL10Ac3g07358 Beta vulgaris HOM05D005962 ORTHO05D007325 2.1e-122 442.6 254 85.4
Nn4g25123 Nelumbo nucifera HOM05D005962 ORTHO05D007325 3.6e-98 362.1 253 71.5
TAR623G1297 Trochodendron aralioides HOM05D005962 ORTHO05D007325 4.6e-98 361.7 260 72.7
CANSAT21G1984 Cannabis sativa HOM05D005962 ORTHO05D007325 6.1e-98 361.3 253 71.1
Ciclev10026335m.g Citrus clementina HOM05D005962 ORTHO05D007325 1.8e-97 359.8 251 74.5
Sabra17G0126400 Salix brachista HOM05D005962 ORTHO05D007325 2.3e-97 359.4 260 71.2
TWI12G1051 Tripterygium wilfordii HOM05D005962 ORTHO05D007325 2.3e-97 359.4 255 71.8
Haze_15888 Corylus avellana HOM05D005962 ORTHO05D007325 3.9e-97 358.6 252 71.8
DCAR_007600 Daucus carota HOM05D005962 ORTHO05D007325 3.9e-97 358.6 259 71.0
CiPaw.02G144100 Carya illinoinensis HOM05D005962 ORTHO05D007325 5.1e-97 358.2 250 72.8
Lsat_1_v5_gn_5_181040 Lactuca sativa HOM05D005962 ORTHO05D007325 6.7e-97 357.8 247 74.1
Sc19g0007830 Simmondsia chinensis HOM05D005962 ORTHO05D007325 8.8e-97 357.5 262 71.0
vmacro18833 Vaccinium macrocarpon HOM05D005962 ORTHO05D007325 2.5e-96 355.9 258 69.8
Phvul.010G143300 Phaseolus vulgaris HOM05D005962 ORTHO05D007325 3.3e-96 355.5 247 73.7
PGSC0003DMG401002516 Solanum tuberosum HOM05D005962 ORTHO05D007325 3.3e-96 355.5 255 71.0
arahy.Tifrunner.gnm1.ann1.FEFU12 Arachis hypogaea HOM05D005962 ORTHO05D007325 4.3e-96 355.1 246 73.6
ECA248G1573 Erigeron canadensis HOM05D005962 ORTHO05D007325 9.7e-96 354.0 249 74.3
Manes.04G136400 Manihot esculenta HOM05D005962 ORTHO05D007325 1.3e-95 353.6 246 72.8
Oeu024256.1 Olea europaea HOM05D005962 ORTHO05D007325 2.8e-95 352.4 263 70.0
Actinidia32123 Actinidia chinensis HOM05D005962 ORTHO05D007325 3.7e-95 352.1 254 70.9
Manes.11G030300 Manihot esculenta HOM05D005962 ORTHO05D007325 3.7e-95 352.1 246 71.1
Rhsim08G0229500 Rhododendron simsii HOM05D005962 ORTHO05D007325 3.7e-95 352.1 258 69.8
Solyc12g044640.2 Solanum lycopersicum HOM05D005962 ORTHO05D007325 1.1e-94 350.5 255 70.6
Atru.chr12.732 Acer truncatum HOM05D005962 ORTHO05D007325 1.4e-94 350.1 250 72.8
Cc00_g23930 Coffea canephora HOM05D005962 ORTHO05D007325 1.8e-94 349.7 254 70.1
QL08p056642 Quercus lobata HOM05D005962 ORTHO05D007325 1.8e-94 349.7 252 70.2
PSO210G7608 Papaver somniferum HOM05D005962 ORTHO05D007325 3.1e-94 349.0 257 68.9
VMungo0331G0822 Vigna mungo HOM05D005962 ORTHO05D007325 3.1e-94 349.0 250 72.4
COL.COLO4_30547 Corchorus olitorius HOM05D005962 ORTHO05D007325 5.3e-94 348.2 258 67.4
PSO210G0258 Papaver somniferum HOM05D005962 ORTHO05D007325 5.3e-94 348.2 256 69.1
Peaxi162Scf00038g01151 Petunia axillaris HOM05D005962 ORTHO05D007325 9.1e-94 347.4 252 70.2
Psat4g195960 Pisum sativum HOM05D005962 ORTHO05D007325 9.1e-94 347.4 247 72.1
Gohir.D01G215700 Gossypium hirsutum HOM05D005962 ORTHO05D007325 2.0e-93 346.3 253 69.2
Aqoxy2G04031 Aquilegia oxysepala HOM05D005962 ORTHO05D007325 5.9e-93 344.7 266 68.8
Lj3g0005277 Lotus japonicus HOM05D005962 ORTHO05D007325 7.7e-93 344.4 245 71.8
Glyma.08G199200 Glycine max HOM05D005962 ORTHO05D007325 1.0e-92 344.0 247 72.5
Thecc.06G103400 Theobroma cacao HOM05D005962 ORTHO05D007325 1.0e-92 344.0 258 69.4
CAN.G1143.30 Capsicum annuum HOM05D005962 ORTHO05D007325 1.7e-92 343.2 236 72.5
Sopen03g040020 Solanum pennellii HOM05D005962 ORTHO05D007325 1.7e-92 343.2 255 70.6
Sed0025844 Sechium edule HOM05D005962 ORTHO05D007325 3.8e-92 342.0 253 69.6
arahy.Tifrunner.gnm1.ann1.M52QXX Arachis hypogaea HOM05D005962 ORTHO05D007325 5.0e-92 341.7 230 75.2
Eucgr.J02602 Eucalyptus grandis HOM05D005962 ORTHO05D007325 5.0e-92 341.7 257 69.6
MBI01_g35895_MAGBIO Magnolia biondii HOM05D005962 ORTHO05D007325 6.5e-92 341.3 258 68.2
CsaV3_3G023410 Cucumis sativus L. HOM05D005962 ORTHO05D007325 8.5e-92 340.9 250 70.0
MSTRG.11013 Avicennia marina HOM05D005962 ORTHO05D007325 1.4e-91 340.1 246 68.3
PGSC0003DMG400026839 Solanum tuberosum HOM05D005962 ORTHO05D007325 1.4e-91 340.1 255 68.6
Dinv37956 Davidia involucrata HOM05D005962 ORTHO05D007325 1.9e-91 339.7 222 75.2
Hma1.2p1_0764F.1_g214960 Hydrangea macrophylla HOM05D005962 ORTHO05D007325 1.9e-91 339.7 249 68.7
Prupe.3G054900 Prunus persica HOM05D005962 ORTHO05D007325 4.2e-91 338.6 252 69.0
Hma1.2p1_2308F.1_g319480 Hydrangea macrophylla HOM05D005962 ORTHO05D007325 9.4e-91 337.4 249 68.3
Gorai.002G261900 Gossypium raimondii HOM05D005962 ORTHO05D007325 1.2e-90 337.0 253 68.0
Medtr8g015230 Medicago truncatula HOM05D005962 ORTHO05D007325 1.6e-90 336.7 247 70.4
Lalb_Chr01g0013231 Lupinus albus HOM05D005962 ORTHO05D007325 2.1e-90 336.3 247 69.2
PGR102G2175 Punica granatum HOM05D005962 ORTHO05D007325 2.1e-90 336.3 237 70.0
ClCG07G013490 Citrullus lanatus HOM05D005962 ORTHO05D007325 2.7e-90 335.9 250 69.2
Os06g0217500 Oryza sativa ssp. japonica HOM05D005962 ORTHO05D007325 3.6e-90 335.5 255 66.3
Rhsim08G0229700 Rhododendron simsii HOM05D005962 ORTHO05D007325 3.6e-90 335.5 271 65.3
Sopen12g023060 Solanum pennellii HOM05D005962 ORTHO05D007325 6.1e-90 334.7 255 68.2
CSS0027495 Camellia sinensis var. sinensis HOM05D005962 ORTHO05D007325 7.9e-90 334.3 226 74.3
Nitab4.5_0002423g0030 Nicotiana tabacum HOM05D005962 ORTHO05D007325 7.9e-90 334.3 255 68.6
Gohir.A10G063800 Gossypium hirsutum HOM05D005962 ORTHO05D007325 1.0e-89 334.0 243 68.7
Migut.I00971 Erythranthe guttata HOM05D005962 ORTHO05D007325 1.4e-89 333.6 263 67.7
Gohir.D10G065400 Gossypium hirsutum HOM05D005962 ORTHO05D007325 2.3e-89 332.8 243 68.7
Nitab4.5_0001172g0180 Nicotiana tabacum HOM05D005962 ORTHO05D007325 5.1e-89 331.6 256 68.4
HPP92_007682 Vanilla planifolia HOM05D005962 ORTHO05D007325 5.1e-89 331.6 261 65.9
Gorai.011G069400 Gossypium raimondii HOM05D005962 ORTHO05D007325 1.5e-88 330.1 231 71.0
Duzib192G0276 Durio zibethinus HOM05D005962 ORTHO05D007325 7.4e-88 327.8 231 71.0
Ca_23283_v3 Cicer arietinum L. HOM05D005962 ORTHO05D007325 1.7e-87 326.6 251 68.1
SalBow6G5073 Salvia bowleyana HOM05D005962 ORTHO05D007325 2.2e-87 326.2 229 71.2
GSVIVG01016927001 Vitis vinifera HOM05D005962 ORTHO05D007325 3.7e-87 325.5 227 71.8
MELO3C013015.2 Cucumis melo HOM05D005962 ORTHO05D007325 1.1e-86 323.9 277 62.5
HanXRQChr15g0489361 Helianthus annuus HOM05D005962 ORTHO05D007325 1.2e-85 320.5 246 67.9
unitig_32.g10986 Utricularia gibba HOM05D005962 ORTHO05D007325 7.7e-85 317.8 263 64.3
Aa31LG8G8050 Aethionema arabicum HOM05D005962 ORTHO05D007325 1.7e-84 316.6 236 69.5
Solyc03g121210.4 Solanum lycopersicum HOM05D005962 ORTHO05D007325 1.7e-84 316.6 213 74.2
CARHR097270 Cardamine hirsuta HOM05D005962 ORTHO05D007325 6.5e-84 314.7 238 67.6
SHI11207 Sapria himalayana HOM05D005962 ORTHO05D007325 6.5e-84 314.7 255 63.9
Sp3g19410 Schrenkiella parvula HOM05D005962 ORTHO05D007325 1.5e-83 313.5 237 68.4
FvH4_6g32730 Fragaria vesca HOM05D005962 ORTHO05D007325 1.9e-83 313.2 245 65.3
Carub.0003s2138 Capsella rubella HOM05D005962 ORTHO05D007325 1.2e-82 310.5 253 65.6
Ah.04g150140 Amaranthus hybridus HOM05D005962 ORTHO05D007325 2.1e-82 309.7 166 88.6
AL3G35400 Arabidopsis lyrata HOM05D005962 ORTHO05D007325 3.6e-82 308.9 252 64.7
RcHm_v2.0_Chr2g0141751 Rosa chinensis HOM05D005962 ORTHO05D007325 3.6e-82 308.9 245 64.5
FAN02G1749 Fragaria x ananassa HOM05D005962 ORTHO05D007325 4.7e-82 308.5 245 63.7
FAN05G1114 Fragaria x ananassa HOM05D005962 ORTHO05D007325 8.0e-82 307.8 252 63.5
Zm00001eb372970 Zea mays HOM05D005962 ORTHO05D007325 3.0e-81 305.8 255 62.0
THA.LOC104805924 Tarenaya hassleriana HOM05D005962 ORTHO05D007325 3.3e-80 302.4 249 64.3
SGA_v2.0_scaffold45G16998 Striga asiatica HOM05D005962 ORTHO05D007325 2.8e-79 299.3 207 72.0
FAN09G1055 Fragaria x ananassa HOM05D005962 ORTHO05D007325 8.2e-79 297.7 245 62.0
Thhalv10021373m.g Eutrema salsugineum HOM05D005962 ORTHO05D007325 1.1e-78 297.4 236 65.3
AT3G21350 Arabidopsis thaliana HOM05D005962 ORTHO05D007325 1.6e-77 293.5 253 62.5
BcaB06g26231 Brassica carinata HOM05D005962 ORTHO05D007325 7.7e-77 291.2 237 64.1
BcaC05g28175 Brassica carinata HOM05D005962 ORTHO05D007325 1.1e-75 287.3 237 63.3
A05p27250 Brassica napus HOM05D005962 ORTHO05D007325 4.2e-75 285.4 237 62.4
Gohir.A01G226000 Gossypium hirsutum HOM05D005962 ORTHO05D007325 5.5e-75 285.0 199 72.4
C05p42110 Brassica napus HOM05D005962 ORTHO05D007325 7.2e-75 284.6 237 62.0
BraA05t21615Z Brassica rapa HOM05D005962 ORTHO05D007325 1.6e-74 283.5 247 60.3
BolC5t32941H Brassica oleracea HOM05D005962 ORTHO05D007325 1.4e-70 270.4 274 53.6
Cpa.g.sc131.1 Carica papaya HOM05D005962 ORTHO05D007325 7.0e-70 268.1 162 81.5
ATR0705G221 Amborella trichopoda HOM05D005962 ORTHO05D007325 1.9e-67 260.0 170 76.5
Migut.O00801 Erythranthe guttata HOM05D005962 ORTHO05D007325 1.4e-65 253.8 171 73.7
Migut.I00969 Erythranthe guttata HOM05D005962 ORTHO05D007325 3.0e-65 252.7 171 73.7
Pp3c11_22580 Physcomitrium patens HOM05D005962 ORTHO05D007325 3.5e-61 239.2 216 57.9
TPR.G39766 Trifolium pratense HOM05D005962 ORTHO05D007325 5.9e-61 238.4 185 66.5
AagrBONN_evm.TU.Sc2ySwM_362.1658 Anthoceros agrestis HOM05D005962 ORTHO05D007325 6.6e-60 235.0 223 53.8
Mapoly0012s0176 Marchantia polymorpha HOM05D005962 ORTHO05D007325 1.9e-59 233.4 192 62.0
SMO143G0120 Selaginella moellendorffii HOM05D005962 ORTHO05D007325 7.3e-59 231.5 189 60.3
Cfa019373 Carpinus fangiana HOM05D005962 ORTHO05D007325 3.4e-56 222.6 170 67.1
Lj5A50T68 Lonicera japonica HOM05D005962 ORTHO05D007325 1.1e-51 207.6 171 64.9
MD14G1079700 Malus domestica HOM05D005962 ORTHO05D007325 1.4e-46 190.7 174 59.2
CBR_g22489 Chara braunii HOM05D005962 ORTHO05D007325 4.3e-43 179.1 236 44.5
Lj5C50T14 Lonicera japonica HOM05D005962 ORTHO05D007325 2.6e-32 143.3 88 78.4
Medtr0361s0030 Medicago truncatula HOM05D005962 ORTHO05D007325 2.6e-32 143.3 103 69.9
Ah.04g150130 Amaranthus hybridus HOM05D000535 ORTHO05D000427 9.9e-32 141.4 95 76.8
Dinv30416 Davidia involucrata HOM05D005962 ORTHO05D007325 3.0e-28 129.8 214 40.7
Lsat_1_v5_gn_2_99820 Lactuca sativa HOM05D005962 ORTHO05D007325 3.0e-28 129.8 84 75.0
Lj3g0016976 Lotus japonicus HOM05D005962 ORTHO05D007325 6.6e-28 128.6 193 45.1
QL05p018100 Quercus lobata HOM05D005962 ORTHO05D007325 9.6e-27 124.8 92 67.4
SEGI_18792 Sequoiadendron giganteum HOM05D005962 ORTHO05D007325 2.1e-26 123.6 80 73.8
Cfa019374 Carpinus fangiana HOM05D005962 ORTHO05D007325 3.1e-25 119.8 73 78.1
RcHm_v2.0_Chr5g0064381 Rosa chinensis HOM05D005962 ORTHO05D007325 3.0e-20 103.2 80 61.2
TAR623G1541 Trochodendron aralioides HOM05D005962 ORTHO05D007325 1.1e-17 94.7 58 79.3
Nitab4.5_0008212g0010 Nicotiana tabacum HOM05D005962 ORTHO05D007325 1.2e-16 91.3 198 36.9
Pp3c7_2870 Physcomitrium patens HOM05D005962 ORTHO05D007325 4.9e-15 85.9 208 34.6
Zm00001eb084330 Zea mays HOM05D005962 ORTHO05D007325 9.3e-14 81.6 59 64.4
TAR636G3265 Trochodendron aralioides HOM05D005962 ORTHO05D007325 1.6e-13 80.9 61 72.1
Zm00001eb192830 Zea mays HOM05D005962 ORTHO05D007325 6.0e-13 79.0 58 62.1
TAR624G0741 Trochodendron aralioides HOM05D005962 ORTHO05D007325 1.5e-11 74.3 145 36.6
GSVIVG01016925001 Vitis vinifera HOM05D000106 ORTHO05D000160 3.4e-08 63.2 42 64.3
BraA09t39590Z Brassica rapa HOM05D002393 ORTHO05D002845 2.9e-07 60.1 74 47.3
Cpa.g.c26718.1 Carica papaya HOM05D005962 ORTHO05D007325 5.5e-06 55.8 54 55.6


User provided reference genes

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