Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62017624 Chenopodium quinoa HOM05D003810 ORTHO05D004416 0.0e+00 1166.8 596 100.0
AUR62015172 Chenopodium quinoa HOM05D003810 ORTHO05D004416 1.1e-304 1049.3 596 92.4
EL10Ac9g22878 Beta vulgaris HOM05D003810 ORTHO05D004416 3.5e-253 878.2 615 76.4
Ah.01g013210 Amaranthus hybridus HOM05D003810 ORTHO05D004416 2.8e-239 832.0 611 73.6
Sc14g0003560 Simmondsia chinensis HOM05D003810 ORTHO05D004416 9.9e-216 753.8 600 68.0
GSVIVG01014785001 Vitis vinifera HOM05D003810 ORTHO05D004416 1.9e-214 749.6 597 66.8
CSS0024914 Camellia sinensis var. sinensis HOM05D003810 ORTHO05D004416 1.5e-211 740.0 602 65.8
Rhsim04G0009500 Rhododendron simsii HOM05D003810 ORTHO05D004416 5.1e-204 714.9 596 63.9
Thecc.09G267400 Theobroma cacao HOM05D003810 ORTHO05D004416 1.4e-198 696.8 591 63.5
Dinv40895 Davidia involucrata HOM05D003810 ORTHO05D004416 2.4e-198 696.0 574 65.9
Cc00_g20590 Coffea canephora HOM05D003810 ORTHO05D004416 1.2e-197 693.7 596 63.4
Hma1.2p1_0193F.1_g084130 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 1.2e-197 693.7 619 62.5
Gohir.D07G118250 Gossypium hirsutum HOM05D003810 ORTHO05D004416 1.6e-197 693.3 590 63.2
Gorai.001G127200 Gossypium raimondii HOM05D003810 ORTHO05D004416 1.7e-196 689.9 591 63.5
HanXRQChr05g0160211 Helianthus annuus HOM05D003810 ORTHO05D004416 3.0e-196 689.1 591 62.9
CAN.G492.44 Capsicum annuum HOM05D003810 ORTHO05D004416 8.7e-196 687.6 600 62.7
Nitab4.5_0001622g0070 Nicotiana tabacum HOM05D003810 ORTHO05D004416 2.1e-194 682.9 593 62.9
PSO063G0853 Papaver somniferum HOM05D003810 ORTHO05D004416 3.6e-194 682.2 607 61.8
Duzib150G1314 Durio zibethinus HOM05D003810 ORTHO05D004416 1.8e-193 679.9 590 62.7
PSO782G5597 Papaver somniferum HOM05D003810 ORTHO05D004416 5.3e-193 678.3 607 61.3
Nitab4.5_0000611g0250 Nicotiana tabacum HOM05D003810 ORTHO05D004416 1.5e-192 676.8 593 62.7
Peaxi162Scf00212g00616 Petunia axillaris HOM05D003810 ORTHO05D004416 4.5e-192 675.2 595 61.8
Nn2g14662 Nelumbo nucifera HOM05D003810 ORTHO05D004416 5.8e-192 674.9 609 61.4
Actinidia00838 Actinidia chinensis HOM05D003810 ORTHO05D004416 9.9e-192 674.1 551 65.9
Solyc10g005900.3 Solanum lycopersicum HOM05D003810 ORTHO05D004416 9.9e-192 674.1 593 61.9
Sopen10g001850 Solanum pennellii HOM05D003810 ORTHO05D004416 9.9e-192 674.1 593 61.9
vmacro22299 Vaccinium macrocarpon HOM05D003810 ORTHO05D004416 9.9e-192 674.1 728 53.7
ATR0751G036 Amborella trichopoda HOM05D003810 ORTHO05D004416 8.4e-191 671.0 600 60.7
MSTRG.13036 Avicennia marina HOM05D003810 ORTHO05D004416 5.4e-190 668.3 595 61.2
CsaV3_4G027560 Cucumis sativus L. HOM05D003810 ORTHO05D004416 1.0e-188 664.1 603 60.7
MBI15_g00877_MAGBIO Magnolia biondii HOM05D003810 ORTHO05D004416 1.0e-188 664.1 598 62.0
MELO3C020474.2 Cucumis melo HOM05D003810 ORTHO05D004416 1.3e-188 663.7 598 60.7
Cfa016940 Carpinus fangiana HOM05D003810 ORTHO05D004416 1.8e-188 663.3 602 60.1
Aqoxy3G00950 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 6.7e-188 661.4 596 60.6
Eucgr.J01409 Eucalyptus grandis HOM05D003810 ORTHO05D004416 2.5e-187 659.4 593 60.2
Sed0019869 Sechium edule HOM05D003810 ORTHO05D004416 3.3e-187 659.1 598 60.4
Ciclev10007802m.g Citrus clementina HOM05D003810 ORTHO05D004416 2.8e-186 656.0 600 60.7
QL08p001596 Quercus lobata HOM05D003810 ORTHO05D004416 2.8e-186 656.0 611 58.6
RcHm_v2.0_Chr7g0221221 Rosa chinensis HOM05D003810 ORTHO05D004416 6.9e-185 651.4 598 59.7
COL.COLO4_25217 Corchorus olitorius HOM05D003810 ORTHO05D004416 1.3e-183 647.1 593 59.4
CiPaw.11G208700 Carya illinoinensis HOM05D003810 ORTHO05D004416 3.8e-183 645.6 594 58.9
Haze_09895 Corylus avellana HOM05D003810 ORTHO05D004416 2.5e-182 642.9 622 58.0
CANSAT11G0157 Cannabis sativa HOM05D003810 ORTHO05D004416 1.6e-181 640.2 599 59.9
Cpa.g.sc181.12 Carica papaya HOM05D003810 ORTHO05D004416 2.1e-181 639.8 564 63.5
vmacro09609 Vaccinium macrocarpon HOM05D003810 ORTHO05D004416 6.0e-181 638.3 707 52.8
ECA246G2898 Erigeron canadensis HOM05D003810 ORTHO05D004416 7.9e-181 637.9 591 59.1
Oeu062684.4 Olea europaea HOM05D003810 ORTHO05D004416 1.3e-180 637.1 692 54.0
Thhalv10011333m.g Eutrema salsugineum HOM05D003810 ORTHO05D004416 3.9e-180 635.6 594 58.9
Aqoxy2G00893 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 6.7e-180 634.8 597 58.6
PGR042G2745 Punica granatum HOM05D003810 ORTHO05D004416 8.7e-180 634.4 602 57.6
MD15G1441400 Malus domestica HOM05D003810 ORTHO05D004416 1.9e-179 633.3 594 59.6
Aa31LG10G490 Aethionema arabicum HOM05D003810 ORTHO05D004416 2.1e-178 629.8 593 59.2
Lj5g0018758 Lotus japonicus HOM05D003810 ORTHO05D004416 2.1e-178 629.8 593 58.5
FAN04G0096 Fragaria x ananassa HOM05D003810 ORTHO05D004416 4.8e-178 628.6 596 58.6
ClCG04G003010 Citrullus lanatus HOM05D003810 ORTHO05D004416 1.2e-176 624.0 594 58.4
AL1G63840 Arabidopsis lyrata HOM05D003810 ORTHO05D004416 1.5e-176 623.6 593 58.7
Atru.chr2.3847 Acer truncatum HOM05D003810 ORTHO05D004416 2.6e-176 622.9 594 59.4
CARHR045410 Cardamine hirsuta HOM05D003810 ORTHO05D004416 5.8e-176 621.7 588 58.7
Migut.H01729 Erythranthe guttata HOM05D003810 ORTHO05D004416 1.3e-175 620.5 593 56.8
Carub.0001s4426 Capsella rubella HOM05D003810 ORTHO05D004416 3.8e-175 619.0 592 58.3
Prupe.1G583500 Prunus persica HOM05D003810 ORTHO05D004416 6.5e-175 618.2 606 57.3
THA.LOC104815683 Tarenaya hassleriana HOM05D003810 ORTHO05D004416 8.4e-175 617.8 598 58.2
Medtr1g090110 Medicago truncatula HOM05D003810 ORTHO05D004416 1.4e-174 617.1 604 56.8
Lsat_1_v5_gn_1_66020 Lactuca sativa HOM05D003810 ORTHO05D004416 1.9e-174 616.7 605 58.0
Ca_10408_v3 Cicer arietinum L. HOM05D003810 ORTHO05D004416 2.5e-174 616.3 620 55.3
Atru.chr12.1053 Acer truncatum HOM05D003810 ORTHO05D004416 1.2e-173 614.0 594 58.9
Sp5g24310 Schrenkiella parvula HOM05D003810 ORTHO05D004416 2.1e-173 613.2 586 58.2
Phvul.007G134900 Phaseolus vulgaris HOM05D003810 ORTHO05D004416 4.6e-173 612.1 602 56.3
VMungo0720G2836 Vigna mungo HOM05D003810 ORTHO05D004416 6.0e-173 611.7 593 56.8
BcaB05g24435 Brassica carinata HOM05D003810 ORTHO05D004416 1.0e-172 610.9 586 58.2
arahy.Tifrunner.gnm1.ann1.KKS8QY Arachis hypogaea HOM05D003810 ORTHO05D004416 1.3e-172 610.5 588 57.7
TPR.G13386 Trifolium pratense HOM05D003810 ORTHO05D004416 4.3e-171 605.5 591 56.9
Psat6g170400 Pisum sativum HOM05D003810 ORTHO05D004416 5.7e-171 605.1 600 57.3
BcaC03g15064 Brassica carinata HOM05D003810 ORTHO05D004416 1.3e-170 604.0 587 57.6
A02p15760 Brassica napus HOM05D003810 ORTHO05D004416 1.3e-170 604.0 588 57.7
Glyma.20G197500 Glycine max HOM05D003810 ORTHO05D004416 1.6e-170 603.6 586 56.3
C02p26210 Brassica napus HOM05D003810 ORTHO05D004416 2.2e-170 603.2 587 57.6
BolC2t08687H Brassica oleracea HOM05D003810 ORTHO05D004416 2.2e-170 603.2 587 57.6
AT3G61420 Arabidopsis thaliana HOM05D003810 ORTHO05D004416 3.7e-170 602.4 586 57.5
BraA02t06637Z Brassica rapa HOM05D003810 ORTHO05D004416 8.2e-170 601.3 588 57.5
Lj3A773G17 Lonicera japonica HOM05D003810 ORTHO05D004416 1.5e-168 597.0 602 57.3
Os08g0338200 Oryza sativa ssp. japonica HOM05D003810 ORTHO05D004416 2.6e-168 596.3 597 56.8
DCAR_017597 Daucus carota HOM05D003810 ORTHO05D004416 7.7e-168 594.7 610 55.9
FAN18G3759 Fragaria x ananassa HOM05D003810 ORTHO05D004416 2.2e-167 593.2 719 49.1
TWI23G0485 Tripterygium wilfordii HOM05D003810 ORTHO05D004416 6.5e-167 591.7 604 56.3
HPP92_028601 Vanilla planifolia HOM05D003810 ORTHO05D004416 1.9e-166 590.1 593 56.3
FAN08G2973 Fragaria x ananassa HOM05D003810 ORTHO05D004416 3.2e-166 589.3 602 55.3
Manes.02G224100 Manihot esculenta HOM05D003810 ORTHO05D004416 3.0e-164 582.8 546 59.0
AL5G43720 Arabidopsis lyrata HOM05D003810 ORTHO05D004416 3.9e-164 582.4 586 56.5
Sabra07G0088100 Salix brachista HOM05D003810 ORTHO05D004416 1.7e-162 577.0 666 51.2
unitig_61.g26129 Utricularia gibba HOM05D003810 ORTHO05D004416 2.2e-162 576.6 593 55.6
Medtr6g071555 Medicago truncatula HOM05D003810 ORTHO05D004416 3.7e-162 575.9 605 54.5
arahy.Tifrunner.gnm1.ann1.60T2A8 Arachis hypogaea HOM05D003810 ORTHO05D004416 6.3e-162 575.1 588 55.3
FvH4_5g28910 Fragaria vesca HOM05D003810 ORTHO05D004416 3.8e-159 565.8 538 57.8
CDE04G2581 Ceratophyllum demersum HOM05D003810 ORTHO05D004416 7.2e-158 561.6 597 55.3
Dinv10375 Davidia involucrata HOM05D003810 ORTHO05D004416 1.2e-157 560.8 583 55.2
SGA_v2.0_scaffold42G15939 Striga asiatica HOM05D003810 ORTHO05D004416 4.7e-157 558.9 643 50.4
Glyma.10G193000 Glycine max HOM05D003810 ORTHO05D004416 1.4e-156 557.4 586 53.9
AT1G55750 Arabidopsis thaliana HOM05D003810 ORTHO05D004416 1.2e-152 544.3 534 57.7
Lj3C711T10 Lonicera japonica HOM05D003810 ORTHO05D004416 9.4e-150 534.6 483 62.1
SGA_v2.0_scaffold146G36126 Striga asiatica HOM05D003810 ORTHO05D004416 9.4e-150 534.6 588 52.6
Potri.007G107400 Populus trichocarpa HOM05D003810 ORTHO05D004416 3.7e-146 522.7 545 55.4
Lsat_1_v5_gn_9_33460 Lactuca sativa HOM05D003810 ORTHO05D004416 1.6e-144 517.3 467 60.6
Aqoxy7G03331 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 1.0e-140 504.6 476 57.4
Duzib168G0397 Durio zibethinus HOM05D003810 ORTHO05D004416 5.2e-140 502.3 429 62.9
Mapoly0009s0093 Marchantia polymorpha HOM05D003810 ORTHO05D004416 3.1e-137 493.0 611 48.8
TAR629G3163 Trochodendron aralioides HOM05D003810 ORTHO05D004416 4.7e-133 479.2 442 61.5
FAN14G4445 Fragaria x ananassa HOM05D003810 ORTHO05D004416 2.3e-132 476.9 612 48.0
Zm00001eb172700 Zea mays HOM05D003810 ORTHO05D004416 8.6e-127 458.4 471 55.8
AagrBONN_evm.TU.Sc2ySwM_117.3105 Anthoceros agrestis HOM05D003810 ORTHO05D004416 4.2e-126 456.1 604 45.7
Lj1A897G41 Lonicera japonica HOM05D003810 ORTHO05D004416 2.3e-124 450.3 400 63.2
Lalb_Chr06g0169751 Lupinus albus HOM05D003810 ORTHO05D004416 6.8e-124 448.7 384 60.9
Pp3c26_14480 Physcomitrium patens HOM05D003810 ORTHO05D004416 4.4e-123 446.0 595 42.7
TAR627G1185 Trochodendron aralioides HOM05D003810 ORTHO05D004416 2.5e-118 430.3 369 66.1
Gohir.A07G114448 Gossypium hirsutum HOM05D003810 ORTHO05D004416 9.2e-113 411.8 355 64.5
BcaB07g33855 Brassica carinata HOM05D003810 ORTHO05D004416 6.0e-112 409.1 562 46.6
FvH4_6g25000 Fragaria vesca HOM05D003810 ORTHO05D004416 9.8e-107 391.7 419 54.4
CiPaw.14G066900 Carya illinoinensis HOM05D003810 ORTHO05D004416 1.3e-103 381.3 345 58.6
CARHR219980 Cardamine hirsuta HOM05D003810 ORTHO05D004416 3.9e-103 379.8 371 57.7
Prupe.5G213500 Prunus persica HOM05D003810 ORTHO05D004416 3.6e-101 373.2 471 48.8
Thhalv10011448m.g Eutrema salsugineum HOM05D003810 ORTHO05D004416 3.2e-97 360.1 542 46.1
SMO228G0023 Selaginella moellendorffii HOM05D003810 ORTHO05D004416 2.3e-95 354.0 601 39.1
Potri.005G061432 Populus trichocarpa HOM05D003810 ORTHO05D004416 2.8e-93 347.1 373 55.8
Prupe.5G046900 Prunus persica HOM05D003810 ORTHO05D004416 2.2e-90 337.4 469 45.6
BcaC08g42928 Brassica carinata HOM05D003810 ORTHO05D004416 1.3e-85 321.6 477 45.9
QL04p000617 Quercus lobata HOM05D003810 ORTHO05D004416 4.9e-82 309.7 417 47.0
FAN02G0111 Fragaria x ananassa HOM05D003810 ORTHO05D004416 9.6e-78 295.4 471 42.7
FAN02G0356 Fragaria x ananassa HOM05D003810 ORTHO05D004416 1.3e-74 285.0 444 42.8
Gohir.A07G114432 Gossypium hirsutum HOM05D003810 ORTHO05D004416 7.1e-73 279.3 209 66.5
Lj1A897G42 Lonicera japonica HOM05D003810 ORTHO05D004416 7.4e-70 269.2 189 70.9
MD08G1246300 Malus domestica HOM05D003810 ORTHO05D004416 1.6e-69 268.1 229 63.8
BolC6t35297H Brassica oleracea HOM05D003810 ORTHO05D004416 1.6e-64 251.5 308 50.3
Hma1.2p1_2995F.1_g331440 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 6.0e-64 249.6 342 49.1
TAR627G1127 Trochodendron aralioides HOM05D003810 ORTHO05D004416 2.3e-63 247.7 179 67.6
Potri.005G061366 Populus trichocarpa HOM05D003810 ORTHO05D004416 6.2e-61 239.6 204 59.3
FAN09G2262 Fragaria x ananassa HOM05D003810 ORTHO05D004416 1.3e-58 231.9 366 42.3
FAN05G0299 Fragaria x ananassa HOM05D003810 ORTHO05D010162 9.3e-57 225.7 267 49.1
Lj3g0026478 Lotus japonicus HOM05D003810 ORTHO05D004416 4.6e-56 223.4 280 46.1
RcHm_v2.0_Chr2g0090241 Rosa chinensis HOM05D003810 ORTHO05D004416 1.8e-55 221.5 466 39.3
FAN02G2818 Fragaria x ananassa HOM05D003810 ORTHO05D004416 2.3e-55 221.1 307 44.3
Rhsim05G0134800 Rhododendron simsii HOM05D003492 ORTHO05D005115 2.9e-50 204.1 337 41.2
MD08G1246400 Malus domestica HOM05D003810 ORTHO05D004416 3.8e-50 203.8 165 61.2
SHI21694 Sapria himalayana HOM05D003810 ORTHO05D004416 2.1e-48 198.0 182 57.1
CBR_g28523 Chara braunii HOM05D000019 ORTHO05D000002 2.3e-47 194.5 236 47.9
CiPaw.14G066700 Carya illinoinensis HOM05D003810 ORTHO05D004416 2.0e-46 191.4 193 56.5
Lalb_Chr06g0169761 Lupinus albus HOM05D003810 ORTHO05D004416 1.8e-44 184.9 195 55.9
Hund17709 Selenicereus undatus HOM05D003810 ORTHO05D004416 2.4e-44 184.5 337 40.1
Hma1.2p1_2995F.1_g331430 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 8.5e-42 176.0 190 54.7
ECA233G1945 Erigeron canadensis HOM05D000449 ORTHO05D003939 2.2e-37 161.4 149 59.1
CAN.G306.2 Capsicum annuum HOM05D003810 ORTHO05D004416 1.8e-36 158.3 182 53.8
CAN.G306.3 Capsicum annuum HOM05D003810 ORTHO05D004416 2.4e-36 157.9 182 53.8
HPP92_016056 Vanilla planifolia HOM05D003810 ORTHO05D004416 4.1e-36 157.1 120 65.0
Actinidia03659 Actinidia chinensis HOM05D003810 ORTHO05D004416 2.0e-30 138.3 139 57.6
SMO031G0001 Selaginella moellendorffii HOM05D003810 ORTHO05D004416 2.2e-26 124.8 127 48.8
CAN.G790.44 Capsicum annuum HOM05D000872 ORTHO05D000777 1.9e-25 121.7 190 42.1
Oeu005536.2 Olea europaea HOM05D003810 ORTHO05D004416 3.2e-25 120.9 161 47.8
QL12p013194 Quercus lobata HOM05D003810 ORTHO05D004416 2.7e-24 117.9 189 38.1
TAR629G2180 Trochodendron aralioides HOM05D003810 ORTHO05D004416 8.8e-23 112.8 65 81.5
TPR.G30194 Trifolium pratense HOM05D003810 ORTHO05D004416 1.2e-22 112.5 182 38.5
CAN.G312.5 Capsicum annuum HOM05D003810 ORTHO05D000001 6.3e-21 106.7 174 42.0
PRCOL_00004489 Prasinoderma coloniale HOM05D003810 ORTHO05D004416 1.1e-20 105.9 649 24.2
CAN.G1328.7 Capsicum annuum HOM05D003810 ORTHO05D004416 1.3e-18 99.0 74 66.2
CAN.G1057.19 Capsicum annuum HOM05D000222 ORTHO05D004416 2.9e-18 97.8 75 65.3
MCO14G434 Micromonas commoda HOM05D003810 ORTHO05D004416 6.5e-18 96.7 753 22.0
CAN.G289.45 Capsicum annuum HOM05D002177 ORTHO05D004416 8.5e-18 96.3 78 61.5
SalBow3G3831 Salvia bowleyana HOM05D003810 ORTHO05D004416 3.2e-17 94.4 109 48.6
Hund08475 Selenicereus undatus HOM05D000185 ORTHO05D000105 3.6e-16 90.9 62 79.0
Sabra05G0051600 Salix brachista HOM05D003810 ORTHO05D004416 4.4e-14 84.0 208 34.6
SHI21696 Sapria himalayana HOM05D003810 ORTHO05D004416 1.7e-13 82.0 108 42.6
CAN.G11.19 Capsicum annuum HOM05D003810 ORTHO05D004416 6.3e-13 80.1 56 66.1
ClCG09G022970 Citrullus lanatus HOM05D003810 ORTHO05D004416 1.1e-12 79.3 63 61.9
SHI21692 Sapria himalayana HOM05D003810 ORTHO05D004416 5.4e-12 77.0 111 38.7
CAN.G479.68 Capsicum annuum HOM05D000222 ORTHO05D004387 7.0e-12 76.6 53 67.9
SGA_v2.0_scaffold126G33829 Striga asiatica HOM05D003810 ORTHO05D004416 2.0e-11 75.1 161 35.4
SalBow3G0229 Salvia bowleyana HOM05D003810 ORTHO05D004416 1.7e-10 72.0 74 52.7
Cre10.g466550 Chlamydomonas reinhardtii HOM05D003810 ORTHO05D004416 8.6e-10 69.7 277 24.5
AUR62042108 Chenopodium quinoa HOM05D000216 ORTHO05D000634 1.9e-09 68.6 42 85.7
TPR.G30768 Trifolium pratense HOM05D003810 ORTHO05D004416 4.3e-09 67.4 56 60.7
CAN.G1077.9 Capsicum annuum HOM05D000222 ORTHO05D012343 7.2e-09 66.6 155 34.8
CDE07G1690 Ceratophyllum demersum HOM05D003810 ORTHO05D004416 7.2e-09 66.6 126 41.3
Nitab4.5_0001303g0160 Nicotiana tabacum HOM05D003810 ORTHO05D004416 7.2e-09 66.6 45 68.9
Hund17711 Selenicereus undatus HOM05D003810 ORTHO05D004416 7.2e-09 66.6 44 70.5
CAN.G1034.2 Capsicum annuum HOM05D000222 ORTHO05D011077 2.3e-07 61.6 218 28.9
CAN.G523.5 Capsicum annuum HOM05D000222 ORTHO05D012343 3.0e-07 61.2 63 50.8
Mapoly0063s0044 Marchantia polymorpha HOM05D003810 ORTHO05D004416 6.8e-07 60.1 60 55.0


User provided reference genes

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