Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62016004 Chenopodium quinoa HOM05D005328 ORTHO05D006049 1.5e-148 530.0 377 100.0
AUR62021212 Chenopodium quinoa HOM05D005328 ORTHO05D006049 4.2e-95 352.4 352 76.4
Ah.07g207330 Amaranthus hybridus HOM05D005328 ORTHO05D002024 1.2e-70 271.2 405 56.8
Hund04726 Selenicereus undatus HOM05D005328 ORTHO05D006049 7.9e-70 268.5 369 54.2
EL10Ac3g05669 Beta vulgaris HOM05D005328 ORTHO05D006049 4.8e-59 232.6 395 54.2
Sc13g0008540 Simmondsia chinensis HOM05D005328 ORTHO05D006049 7.2e-55 218.8 350 51.4
Dinv04372 Davidia involucrata HOM05D005328 ORTHO05D006049 8.5e-48 195.3 349 43.6
Thecc.04G160200 Theobroma cacao HOM05D005328 ORTHO05D006049 1.2e-46 191.4 350 46.0
Migut.M01485 Erythranthe guttata HOM05D005328 ORTHO05D006049 1.6e-46 191.0 350 54.0
COL.COLO4_12851 Corchorus olitorius HOM05D005328 ORTHO05D006049 4.7e-46 189.5 347 52.4
Hma1.2p1_0391F.1_g142830 Hydrangea macrophylla HOM05D005328 ORTHO05D006049 6.1e-46 189.1 349 48.7
Actinidia02271 Actinidia chinensis HOM05D005328 ORTHO05D006049 8.0e-46 188.7 357 47.1
Gohir.D02G007001 Gossypium hirsutum HOM05D005328 ORTHO05D006049 2.3e-45 187.2 350 52.9
Atru.chr1.2204 Acer truncatum HOM05D005328 ORTHO05D006049 5.2e-45 186.0 377 38.5
Gohir.A02G007200 Gossypium hirsutum HOM05D005328 ORTHO05D006049 5.2e-45 186.0 353 51.6
Oeu016925.1 Olea europaea HOM05D005328 ORTHO05D006049 6.8e-45 185.7 355 48.7
CAN.G2049.4 Capsicum annuum HOM05D005328 ORTHO05D006049 8.8e-45 185.3 365 45.2
Rhsim13G0137800 Rhododendron simsii HOM05D005328 ORTHO05D006049 8.8e-45 185.3 349 42.4
Eucgr.E04239 Eucalyptus grandis HOM05D005328 ORTHO05D006049 2.0e-44 184.1 354 43.2
PGR042G0801 Punica granatum HOM05D005328 ORTHO05D006049 7.5e-44 182.2 346 50.9
TWI63G1825 Tripterygium wilfordii HOM05D005328 ORTHO05D006049 7.5e-44 182.2 352 50.9
CSS0022453 Camellia sinensis var. sinensis HOM05D005328 ORTHO05D006049 9.8e-44 181.8 360 47.2
Phvul.006G134100 Phaseolus vulgaris HOM05D005328 ORTHO05D006049 2.2e-43 180.6 376 44.9
SGA_v2.0_scaffold7G03648 Striga asiatica HOM05D005328 ORTHO05D006049 2.8e-43 180.3 361 46.0
Duzib151G0457 Durio zibethinus HOM05D005328 ORTHO05D006049 4.9e-43 179.5 354 47.7
Gorai.005G008200 Gossypium raimondii HOM05D005328 ORTHO05D006049 6.3e-43 179.1 353 50.1
unitig_748.g7855 Utricularia gibba HOM05D005328 ORTHO05D006049 1.1e-42 178.3 360 43.9
Manes.03G095600 Manihot esculenta HOM05D005328 ORTHO05D006049 3.1e-42 176.8 348 38.8
Cpa.g.sc53.124 Carica papaya HOM05D005328 ORTHO05D006049 4.1e-42 176.4 390 40.5
Ciclev10015350m.g Citrus clementina HOM05D005328 ORTHO05D006049 4.1e-42 176.4 350 47.4
VMungo0540G0318 Vigna mungo HOM05D005328 ORTHO05D006049 4.1e-42 176.4 375 40.3
Ca_00786_v3 Cicer arietinum L. HOM05D005328 ORTHO05D006049 7.0e-42 175.6 349 51.3
Ca_11373_v3 Cicer arietinum L. HOM05D005328 ORTHO05D006049 7.0e-42 175.6 349 51.3
TAR626G1462 Trochodendron aralioides HOM05D005328 ORTHO05D006049 1.6e-41 174.5 354 52.8
Aa31LG1G25860 Aethionema arabicum HOM05D005328 ORTHO05D006049 3.5e-41 173.3 368 41.0
Lj6g0010372 Lotus japonicus HOM05D005328 ORTHO05D006049 3.5e-41 173.3 348 42.5
ECA234G3238 Erigeron canadensis HOM05D005328 ORTHO05D006049 4.5e-41 172.9 351 40.5
Nitab4.5_0005721g0030 Nicotiana tabacum HOM05D005328 ORTHO05D006049 7.8e-41 172.2 344 42.2
BraA05t19414Z Brassica rapa HOM05D005328 ORTHO05D006049 1.0e-40 171.8 365 46.3
TPR.G10498 Trifolium pratense HOM05D005328 ORTHO05D006049 5.0e-40 169.5 358 55.6
Glyma.15G123900 Glycine max HOM05D005328 ORTHO05D006049 6.6e-40 169.1 377 44.8
Lsat_1_v5_gn_4_65161 Lactuca sativa HOM05D005328 ORTHO05D006049 8.6e-40 168.7 348 38.8
Aqoxy6G01137 Aquilegia oxysepala HOM05D005328 ORTHO05D006049 1.5e-39 167.9 441 43.3
A05p04290 Brassica napus HOM05D005328 ORTHO05D006049 1.5e-39 167.9 362 46.7
Sopen02g029040 Solanum pennellii HOM05D005328 ORTHO05D006049 1.5e-39 167.9 348 42.2
BcaC02g12330 Brassica carinata HOM05D005328 ORTHO05D006049 1.9e-39 167.5 355 45.6
A03p24730 Brassica napus HOM05D005328 ORTHO05D006049 1.9e-39 167.5 359 54.0
BraA03t11679Z Brassica rapa HOM05D005328 ORTHO05D006049 1.9e-39 167.5 359 54.0
Lalb_Chr15g0088491 Lupinus albus HOM05D005328 ORTHO05D006049 2.5e-39 167.2 399 43.6
CDE03G0050 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 5.6e-39 166.0 355 45.4
THA.LOC104804861 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 9.5e-39 165.2 353 46.7
THA.LOC104807080 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 9.5e-39 165.2 353 46.7
C04p05070 Brassica napus HOM05D005328 ORTHO05D006049 2.8e-38 163.7 373 43.7
Potri.006G000200 Populus trichocarpa HOM05D005328 ORTHO05D006049 1.4e-37 161.4 350 48.6
Sp4g26280 Schrenkiella parvula HOM05D005328 ORTHO05D006049 2.3e-37 160.6 363 51.0
vmacro03583 Vaccinium macrocarpon HOM05D005328 ORTHO05D006049 4.0e-37 159.8 347 36.9
BcaB02g08879 Brassica carinata HOM05D005328 ORTHO05D006049 6.8e-37 159.1 365 46.0
Solyc02g084340.3 Solanum lycopersicum HOM05D005328 ORTHO05D006049 2.0e-36 157.5 360 42.5
HanXRQChr17g0558521 Helianthus annuus HOM05D005328 ORTHO05D006049 3.4e-36 156.8 345 47.0
HPP92_007484 Vanilla planifolia HOM05D005328 ORTHO05D006049 4.4e-36 156.4 354 42.4
C03p29470 Brassica napus HOM05D005328 ORTHO05D006049 1.3e-35 154.8 364 40.9
Thhalv10001457m.g Eutrema salsugineum HOM05D005328 ORTHO05D006049 2.2e-35 154.1 358 43.0
BcaC01g05181 Brassica carinata HOM05D005328 ORTHO05D006049 2.9e-35 153.7 364 40.7
BolC3t15295H Brassica oleracea HOM05D005328 ORTHO05D006049 2.9e-35 153.7 364 40.7
AL4G43160 Arabidopsis lyrata HOM05D005328 ORTHO05D006049 6.4e-35 152.5 356 52.2
Os08g0500200 Oryza sativa ssp. japonica HOM05D005328 ORTHO05D006049 6.4e-35 152.5 404 48.0
Medtr2g028200 Medicago truncatula HOM05D005328 ORTHO05D006049 1.1e-34 151.8 403 53.6
GSVIVG01018754001 Vitis vinifera HOM05D005328 ORTHO05D006049 4.1e-34 149.8 467 50.1
CiPaw.10G085200 Carya illinoinensis HOM05D005328 ORTHO05D006049 2.0e-33 147.5 354 47.7
arahy.Tifrunner.gnm1.ann1.B05UD4 Arachis hypogaea HOM05D005328 ORTHO05D006049 2.7e-33 147.1 363 47.1
Peaxi162Scf00083g00091 Petunia axillaris HOM05D005328 ORTHO05D006049 1.3e-32 144.8 331 51.4
QL05p066147 Quercus lobata HOM05D005328 ORTHO05D006049 2.3e-32 144.1 347 50.7
MD04G1014200 Malus domestica HOM05D005328 ORTHO05D006049 3.9e-32 143.3 420 50.0
ATR0751G111 Amborella trichopoda HOM05D005328 ORTHO05D006049 2.5e-31 140.6 360 45.8
CARHR139360 Cardamine hirsuta HOM05D005328 ORTHO05D006049 2.5e-31 140.6 412 41.0
Nitab4.5_0002880g0010 Nicotiana tabacum HOM05D005328 ORTHO05D006049 3.3e-31 140.2 351 37.9
Sabra06G0000700 Salix brachista HOM05D005328 ORTHO05D006049 7.3e-31 139.0 361 42.4
BcaB01g03324 Brassica carinata HOM05D005328 ORTHO05D006049 9.5e-31 138.7 345 49.3
FAN17G2578 Fragaria x ananassa HOM05D005328 ORTHO05D006049 9.5e-31 138.7 492 37.0
Sed0006700 Sechium edule HOM05D005328 ORTHO05D006049 1.6e-30 137.9 399 52.1
Cc09_g00040 Coffea canephora HOM05D005328 ORTHO05D006049 8.0e-30 135.6 465 34.2
Psat1g170800 Pisum sativum HOM05D005328 ORTHO05D006049 8.0e-30 135.6 381 47.5
AT2G44200 Arabidopsis thaliana HOM05D005328 ORTHO05D006049 2.3e-29 134.0 412 46.6
FAN07G1972 Fragaria x ananassa HOM05D005328 ORTHO05D006049 8.9e-29 132.1 488 42.4
PSO017G7149 Papaver somniferum HOM05D005328 ORTHO05D006049 2.2e-27 127.5 413 42.9
arahy.Tifrunner.gnm1.ann1.QMQM64 Arachis hypogaea HOM05D005328 ORTHO05D006049 3.7e-27 126.7 417 38.6
RcHm_v2.0_Chr4g0414011 Rosa chinensis HOM05D005328 ORTHO05D006049 1.9e-26 124.4 414 52.2
PGSC0003DMG400003630 Solanum tuberosum HOM05D005328 ORTHO05D006049 1.6e-25 121.3 98 70.4
FAN12G3626 Fragaria x ananassa HOM05D005328 ORTHO05D006049 3.5e-25 120.2 512 36.9
Prupe.1G161500 Prunus persica HOM05D005328 ORTHO05D006049 3.5e-25 120.2 122 59.0
FAN22G2230 Fragaria x ananassa HOM05D005328 ORTHO05D006049 6.0e-25 119.4 509 37.1
FvH4_4g13451 Fragaria vesca HOM05D005328 ORTHO05D006049 1.3e-24 118.2 512 36.9
SalBow8G1780 Salvia bowleyana HOM05D005328 ORTHO05D006049 1.7e-24 117.9 419 45.1
Glyma.09G018000 Glycine max HOM05D005328 ORTHO05D006049 2.5e-23 114.0 435 35.9
MELO3C017635.2 Cucumis melo HOM05D005328 ORTHO05D006049 3.3e-23 113.6 349 40.7
PSO170G6444 Papaver somniferum HOM05D005328 ORTHO05D006049 1.2e-22 111.7 438 40.6
CDE06G0152 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 6.2e-22 109.4 108 59.3
Zm00001eb034090 Zea mays HOM05D005328 ORTHO05D006049 6.2e-22 109.4 163 48.5
SMO143G0138 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 8.9e-21 105.5 348 40.2
Prupe.1G162300 Prunus persica HOM05D005328 ORTHO05D006049 1.5e-20 104.8 81 71.6
DCAR_022842 Daucus carota HOM05D005328 ORTHO05D006049 2.0e-20 104.4 163 50.9
TAR371G0561 Trochodendron aralioides HOM05D005328 ORTHO05D006049 2.0e-20 104.4 68 73.5
ClCG07G017100 Citrullus lanatus HOM05D005328 ORTHO05D006049 3.4e-20 103.6 355 37.2
THA.LOC104798630 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 4.4e-20 103.2 74 68.9
DCAR_022839 Daucus carota HOM05D005328 ORTHO05D006049 5.8e-20 102.8 63 76.2
SEGI_06923 Sequoiadendron giganteum HOM05D005328 ORTHO05D006049 7.5e-20 102.4 511 33.5
CsaV3_4G004310 Cucumis sativus L. HOM05D005328 ORTHO05D006049 9.8e-20 102.1 349 39.8
SMO114G0026 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 3.7e-19 100.1 355 33.0
Nn1g08402 Nelumbo nucifera HOM05D005328 ORTHO05D006049 5.4e-18 96.3 111 60.4
Prupe.1G161200 Prunus persica HOM05D005328 ORTHO05D006049 9.2e-18 95.5 488 33.2
Haze_07067 Corylus avellana HOM05D005328 ORTHO05D006049 1.6e-17 94.7 113 54.0
Carub.0004s2678 Capsella rubella HOM05D005328 ORTHO05D006049 1.0e-16 92.0 419 43.7
AagrBONN_evm.TU.Sc2ySwM_228.5016 Anthoceros agrestis HOM05D005328 ORTHO05D006049 1.7e-16 91.3 57 77.2
Zm00001eb097520 Zea mays HOM05D005328 ORTHO05D006049 2.3e-16 90.9 52 78.8
Pp3c3_9980 Physcomitrium patens HOM05D005328 ORTHO05D006049 6.6e-16 89.4 58 75.9
SMO117G0022 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 1.6e-14 84.7 107 47.7
SMO117G0350 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 2.6e-12 77.4 351 38.7
SMO117G0182 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 2.2e-11 74.3 100 45.0
SMO117G0245 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 1.4e-10 71.6 88 45.5
Sabra16G0007800 Salix brachista HOM05D000040 ORTHO05D001305 6.0e-09 66.2 119 40.3
Mapoly0104s0032 Marchantia polymorpha HOM05D005328 ORTHO05D006049 1.0e-08 65.5 66 50.0
CBR_g2953 Chara braunii HOM05D005328 ORTHO05D006049 2.3e-08 64.3 98 42.9
BcaB02g08878 Brassica carinata HOM05D005328 ORTHO05D006049 1.2e-06 58.5 125 38.4
AT2G44195 Arabidopsis thaliana HOM05D005328 ORTHO05D006049 4.7e-06 56.6 41 61.0
CiPaw.09G114000 Carya illinoinensis HOM05D005328 ORTHO05D006049 8.1e-06 55.8 71 50.7
CiPaw.09G114200 Carya illinoinensis HOM05D005328 ORTHO05D006049 8.1e-06 55.8 71 50.7


User provided reference genes

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