Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62015873 Chenopodium quinoa HOM05D003979 ORTHO05D005530 0.0e+00 1223.4 615 100.0
AUR62020350 Chenopodium quinoa HOM05D003979 ORTHO05D005530 0.0e+00 1208.0 615 98.4
EL10Ac4g07703 Beta vulgaris HOM05D003979 ORTHO05D005530 0.0e+00 1106.3 648 85.3
Hund24848 Selenicereus undatus HOM05D003979 ORTHO05D005530 0.0e+00 1105.9 619 90.3
Ah.04g166150 Amaranthus hybridus HOM05D003979 ORTHO05D005530 0.0e+00 1092.8 606 89.9
HanXRQChr14g0435331 Helianthus annuus HOM05D003979 ORTHO05D005530 1.0e-300 1036.2 591 86.5
Solyc12g043020.2 Solanum lycopersicum HOM05D003979 ORTHO05D005530 1.9e-299 1031.9 619 82.4
Dinv38268 Davidia involucrata HOM05D003979 ORTHO05D005530 2.5e-299 1031.6 623 83.5
PGSC0003DMG400019163 Solanum tuberosum HOM05D003979 ORTHO05D005530 2.5e-299 1031.6 586 86.0
Sopen05g032060 Solanum pennellii HOM05D003979 ORTHO05D005530 3.3e-299 1031.2 616 83.1
Actinidia34623 Actinidia chinensis HOM05D003979 ORTHO05D005530 4.3e-299 1030.8 599 84.5
Hma1.2p1_0691F.1_g204250 Hydrangea macrophylla HOM05D003979 ORTHO05D005530 1.3e-298 1029.2 620 83.5
Solyc05g053540.3 Solanum lycopersicum HOM05D003979 ORTHO05D005530 1.3e-298 1029.2 578 86.9
Sopen12g022260 Solanum pennellii HOM05D003979 ORTHO05D005530 2.8e-298 1028.1 621 82.0
HanXRQChr02g0059571 Helianthus annuus HOM05D003979 ORTHO05D005530 8.1e-298 1026.5 557 89.4
Cfa014896 Carpinus fangiana HOM05D003979 ORTHO05D005530 1.4e-297 1025.8 593 85.2
Sc25g0005860 Simmondsia chinensis HOM05D003979 ORTHO05D005530 1.8e-297 1025.4 618 82.7
CSS0040719 Camellia sinensis var. sinensis HOM05D003979 ORTHO05D005530 3.1e-297 1024.6 618 81.2
Cc03_g07310 Coffea canephora HOM05D003979 ORTHO05D005530 9.0e-297 1023.1 618 82.4
CSS0027237 Camellia sinensis var. sinensis HOM05D003979 ORTHO05D005530 1.2e-296 1022.7 618 81.1
Ciclev10004565m.g Citrus clementina HOM05D003979 ORTHO05D005530 1.2e-296 1022.7 615 82.0
Actinidia35951 Actinidia chinensis HOM05D003979 ORTHO05D005530 1.5e-296 1022.3 623 81.9
TAR365G0531 Trochodendron aralioides HOM05D003979 ORTHO05D005530 1.5e-296 1022.3 625 81.8
Nn1g03146 Nelumbo nucifera HOM05D003979 ORTHO05D005530 2.0e-296 1021.9 558 89.1
Cc02_g25590 Coffea canephora HOM05D003979 ORTHO05D005530 4.5e-296 1020.8 574 86.1
CAN.G765.2 Capsicum annuum HOM05D003979 ORTHO05D005530 1.7e-295 1018.8 599 83.5
Duzib151G0303 Durio zibethinus HOM05D003979 ORTHO05D005530 3.2e-294 1014.6 598 83.3
Migut.N00344 Erythranthe guttata HOM05D003979 ORTHO05D005530 3.2e-294 1014.6 557 87.8
DCAR_031519 Daucus carota HOM05D003979 ORTHO05D005530 7.1e-294 1013.4 608 82.9
Duzib212G0229 Durio zibethinus HOM05D003979 ORTHO05D005530 9.3e-294 1013.1 575 85.4
MSTRG.24631 Avicennia marina HOM05D003979 ORTHO05D005530 1.6e-293 1012.3 601 81.7
CiPaw.02G067900 Carya illinoinensis HOM05D003979 ORTHO05D005530 2.7e-293 1011.5 622 81.2
Glyma.13G207900 Glycine max HOM05D003979 ORTHO05D005530 3.5e-293 1011.1 558 86.9
Lsat_1_v5_gn_6_63381 Lactuca sativa HOM05D003979 ORTHO05D005530 3.5e-293 1011.1 620 80.6
Peaxi162Scf00073g02029 Petunia axillaris HOM05D003979 ORTHO05D005530 3.5e-293 1011.1 616 82.1
arahy.Tifrunner.gnm1.ann1.ZGF32Z Arachis hypogaea HOM05D003979 ORTHO05D005530 4.6e-293 1010.7 617 81.0
Lalb_Chr18g0056121 Lupinus albus HOM05D003979 ORTHO05D005530 7.9e-293 1010.0 564 86.7
Lj6g0025731 Lotus japonicus HOM05D003979 ORTHO05D005530 1.3e-292 1009.2 584 84.1
ClCG05G003530 Citrullus lanatus HOM05D003979 ORTHO05D005530 2.3e-292 1008.4 624 80.8
Thecc.04G210300 Theobroma cacao HOM05D003979 ORTHO05D005530 2.3e-292 1008.4 575 85.0
AUR62017196 Chenopodium quinoa HOM05D003979 ORTHO05D005530 3.0e-292 1008.1 635 79.4
VMungo0540G1831 Vigna mungo HOM05D003979 ORTHO05D005530 3.0e-292 1008.1 587 84.0
MELO3C006331.2 Cucumis melo HOM05D003979 ORTHO05D005530 3.9e-292 1007.7 622 80.4
Medtr2g089340 Medicago truncatula HOM05D003979 ORTHO05D005530 5.1e-292 1007.3 584 84.6
Gohir.A02G024400 Gossypium hirsutum HOM05D003979 ORTHO05D005530 6.7e-292 1006.9 578 85.3
Sed0009934 Sechium edule HOM05D003979 ORTHO05D005530 1.1e-291 1006.1 593 83.3
Ca_00636_v3 Cicer arietinum L. HOM05D003979 ORTHO05D005530 1.9e-291 1005.4 615 80.7
Ca_29705_v3 Cicer arietinum L. HOM05D003979 ORTHO05D005530 1.9e-291 1005.4 615 80.7
Gorai.005G035200 Gossypium raimondii HOM05D003979 ORTHO05D005530 2.5e-291 1005.0 575 85.2
PSO063G3024 Papaver somniferum HOM05D003979 ORTHO05D005530 4.3e-291 1004.2 585 84.1
Phvul.006G152700 Phaseolus vulgaris HOM05D003979 ORTHO05D005530 4.3e-291 1004.2 587 82.8
Gohir.D02G031700 Gossypium hirsutum HOM05D003979 ORTHO05D005530 5.6e-291 1003.8 575 85.0
PSO017G0981 Papaver somniferum HOM05D003979 ORTHO05D005530 5.6e-291 1003.8 576 85.4
CsaV3_3G011200 Cucumis sativus L. HOM05D003979 ORTHO05D005530 1.3e-290 1002.7 622 80.1
Psat1g182280 Pisum sativum HOM05D003979 ORTHO05D005530 1.3e-290 1002.7 604 81.5
MD04G1003600 Malus domestica HOM05D003979 ORTHO05D005530 4.8e-290 1000.7 626 79.7
Potri.001G051700 Populus trichocarpa HOM05D003979 ORTHO05D005530 6.2e-290 1000.3 575 85.4
ECA233G3228 Erigeron canadensis HOM05D003979 ORTHO05D005530 8.1e-290 1000.0 615 80.3
Sabra01G0036200 Salix brachista HOM05D003979 ORTHO05D005530 8.1e-290 1000.0 575 85.4
CANSAT78G1204 Cannabis sativa HOM05D003979 ORTHO05D005530 1.1e-289 999.6 615 80.5
Haze_11573 Corylus avellana HOM05D003979 ORTHO05D005530 3.1e-289 998.0 652 77.6
QL07p012465 Quercus lobata HOM05D003979 ORTHO05D005530 4.0e-289 997.7 614 80.5
THA.LOC104804817 Tarenaya hassleriana HOM05D003979 ORTHO05D005530 4.0e-289 997.7 577 84.4
RcHm_v2.0_Chr1g0328531 Rosa chinensis HOM05D003979 ORTHO05D005530 5.3e-289 997.3 579 83.9
AT3G23940 Arabidopsis thaliana HOM05D003979 ORTHO05D005530 6.9e-289 996.9 615 80.5
Prupe.1G003100 Prunus persica HOM05D003979 ORTHO05D005530 6.9e-289 996.9 621 80.2
Potri.003G176600 Populus trichocarpa HOM05D003979 ORTHO05D005530 1.2e-288 996.1 606 81.5
CARHR100330 Cardamine hirsuta HOM05D003979 ORTHO05D005530 1.5e-288 995.7 590 82.7
COL.COLO4_20310 Corchorus olitorius HOM05D003979 ORTHO05D005530 1.5e-288 995.7 599 82.0
CiPaw.01G125500 Carya illinoinensis HOM05D003979 ORTHO05D005530 2.0e-288 995.3 618 79.4
TAR624G0299 Trochodendron aralioides HOM05D003979 ORTHO05D005530 2.6e-288 995.0 605 82.3
Manes.15G050825 Manihot esculenta HOM05D003979 ORTHO05D005530 7.6e-288 993.4 577 84.6
Zm00001eb175970 Zea mays HOM05D003979 ORTHO05D005530 7.6e-288 993.4 558 85.8
AL3G39610 Arabidopsis lyrata HOM05D003979 ORTHO05D005530 1.0e-287 993.0 590 82.7
BcaB04g20393 Brassica carinata HOM05D003979 ORTHO05D005530 1.0e-287 993.0 599 82.1
Thhalv10002451m.g Eutrema salsugineum HOM05D003979 ORTHO05D005530 1.3e-287 992.6 590 82.4
Os08g0559600 Oryza sativa ssp. japonica HOM05D003979 ORTHO05D005530 2.2e-287 991.9 565 85.1
Carub.0003s2458 Capsella rubella HOM05D003979 ORTHO05D005530 3.8e-287 991.1 619 80.1
A07p08130 Brassica napus HOM05D003979 ORTHO05D005530 4.9e-287 990.7 581 84.0
BraA07t28596Z Brassica rapa HOM05D003979 ORTHO05D005530 4.9e-287 990.7 581 84.0
THA.LOC104808724 Tarenaya hassleriana HOM05D003979 ORTHO05D005530 6.5e-287 990.3 615 79.7
Zm00001eb039310 Zea mays HOM05D003979 ORTHO05D005530 6.5e-287 990.3 565 84.8
Sp3g22010 Schrenkiella parvula HOM05D003979 ORTHO05D005530 1.1e-286 989.6 578 83.7
BcaB06g26604 Brassica carinata HOM05D003979 ORTHO05D005530 1.4e-286 989.2 615 80.0
C01p39410 Brassica napus HOM05D003979 ORTHO05D005530 3.2e-286 988.0 558 86.2
BolC1t03890H Brassica oleracea HOM05D003979 ORTHO05D005530 3.2e-286 988.0 558 86.2
BcaC06g35668 Brassica carinata HOM05D003979 ORTHO05D005530 5.5e-286 987.3 578 84.1
C07p12270 Brassica napus HOM05D003979 ORTHO05D005530 5.5e-286 987.3 578 84.1
Aa31LG8G10930 Aethionema arabicum HOM05D003979 ORTHO05D005530 1.6e-285 985.7 575 83.7
Duzib268G0146 Durio zibethinus HOM05D003979 ORTHO05D005530 1.6e-285 985.7 575 82.8
PGR031G0232 Punica granatum HOM05D003979 ORTHO05D005530 2.7e-285 984.9 615 80.0
ATR0787G169 Amborella trichopoda HOM05D003979 ORTHO05D005530 4.6e-285 984.2 604 80.1
FAN06G4745 Fragaria x ananassa HOM05D003979 ORTHO05D005530 4.6e-285 984.2 558 84.9
FAN01G2046 Fragaria x ananassa HOM05D003979 ORTHO05D005530 7.9e-285 983.4 558 84.8
FAN10G0585 Fragaria x ananassa HOM05D003979 ORTHO05D005530 7.9e-285 983.4 575 83.0
FvH4_7g04190 Fragaria vesca HOM05D003979 ORTHO05D005530 1.3e-284 982.6 578 82.5
Aqoxy2G03779 Aquilegia oxysepala HOM05D003979 ORTHO05D005530 1.8e-284 982.2 599 81.0
A01p30940 Brassica napus HOM05D003979 ORTHO05D005530 2.3e-284 981.9 599 81.3
RhsimUnG0135800 Rhododendron simsii HOM05D003979 ORTHO05D005530 2.3e-284 981.9 648 76.5
BraA01t03222Z Brassica rapa HOM05D003979 ORTHO05D005530 3.9e-284 981.1 592 82.1
BolC7t41694H Brassica oleracea HOM05D003979 ORTHO05D005530 1.3e-282 976.1 592 81.9
Oeu022336.1 Olea europaea HOM05D003979 ORTHO05D005530 3.7e-282 974.5 581 82.6
Aqoxy5G02610 Aquilegia oxysepala HOM05D003979 ORTHO05D005530 4.8e-282 974.2 592 81.4
Nitab4.5_0001769g0010 Nicotiana tabacum HOM05D003979 ORTHO05D005530 8.2e-282 973.4 568 84.2
MBI07_g21060_MAGBIO Magnolia biondii HOM05D003979 ORTHO05D005530 1.4e-281 972.6 659 74.4
Cpa.g.sc59.101 Carica papaya HOM05D003979 ORTHO05D005530 3.4e-280 968.0 603 79.9
AUR62010687 Chenopodium quinoa HOM05D003979 ORTHO05D005530 3.4e-280 968.0 619 78.8
arahy.Tifrunner.gnm1.ann1.NX1XST Arachis hypogaea HOM05D003979 ORTHO05D005530 1.9e-278 962.2 622 77.8
RhsimUnG0180900 Rhododendron simsii HOM05D003979 ORTHO05D005530 5.5e-278 960.7 692 71.7
GSVIVG01029073001 Vitis vinifera HOM05D003979 ORTHO05D005530 6.7e-276 953.7 527 87.1
Hund11465 Selenicereus undatus HOM05D003979 ORTHO05D005530 4.3e-275 951.0 568 82.2
Pp3c11_18700 Physcomitrium patens HOM05D003979 ORTHO05D005530 9.7e-275 949.9 603 76.3
Peaxi162Scf00536g00915 Petunia axillaris HOM05D003979 ORTHO05D005530 5.5e-270 934.1 565 81.8
SMO361G0245 Selaginella moellendorffii HOM05D003979 ORTHO05D005530 5.1e-268 927.5 603 75.6
Gohir.D10G144500 Gossypium hirsutum HOM05D003979 ORTHO05D005530 4.4e-267 924.5 523 85.5
Mapoly0044s0128 Marchantia polymorpha HOM05D003979 ORTHO05D005530 8.2e-266 920.2 580 75.0
Nitab4.5_0001066g0080 Nicotiana tabacum HOM05D003979 ORTHO05D005530 1.4e-262 909.4 575 79.1
CBR_g16971 Chara braunii HOM05D003979 ORTHO05D005530 2.1e-261 905.6 613 73.4
SGA_v2.0_scaffold31G12595 Striga asiatica HOM05D003979 ORTHO05D005530 1.7e-258 896.0 539 80.9
HPP92_025762 Vanilla planifolia HOM05D003979 ORTHO05D005530 3.5e-256 888.3 527 81.2
Lj6C614G9 Lonicera japonica HOM05D003979 ORTHO05D005530 1.2e-251 873.2 625 72.0
Gorai.011G161400 Gossypium raimondii HOM05D003979 ORTHO05D005530 5.7e-243 844.3 579 73.6
TWI09G0393 Tripterygium wilfordii HOM05D003979 ORTHO05D005530 1.3e-242 843.2 624 68.8
Cre03.g206600 Chlamydomonas reinhardtii HOM05D003979 ORTHO05D005530 7.0e-241 837.4 594 69.4
MCO11G076 Micromonas commoda HOM05D003979 ORTHO05D005530 4.0e-236 821.6 557 69.8
SMO361G0819 Selaginella moellendorffii HOM05D003979 ORTHO05D005530 1.5e-227 793.1 490 79.0
unitig_899.g15534 Utricularia gibba HOM05D003979 ORTHO05D005530 7.8e-224 780.8 490 79.0
AagrBONN_evm.TU.Sc2ySwM_228.3337 Anthoceros agrestis HOM05D003979 ORTHO05D005530 1.0e-223 780.4 482 78.8
PRCOL_00005867 Prasinoderma coloniale HOM05D003979 ORTHO05D005530 4.3e-222 775.0 554 68.6
CDE04G1626 Ceratophyllum demersum HOM05D003979 ORTHO05D005530 6.2e-221 771.2 433 86.8
QL06p023475 Quercus lobata HOM05D003979 ORTHO05D005530 9.8e-219 763.8 484 79.1
Gohir.A10G121600 Gossypium hirsutum HOM05D003979 ORTHO05D005530 5.0e-215 751.5 426 85.0
HPP92_025735 Vanilla planifolia HOM05D003979 ORTHO05D005530 1.6e-213 746.5 490 76.5
SEGI_04002 Sequoiadendron giganteum HOM05D003979 ORTHO05D005530 3.7e-210 735.3 433 82.4
HPP92_025731 Vanilla planifolia HOM05D003979 ORTHO05D005530 2.1e-205 719.5 421 82.4
Cfa024863 Carpinus fangiana HOM05D003979 ORTHO05D005530 4.7e-205 718.4 567 61.9
vmacro00507 Vaccinium macrocarpon HOM05D003979 ORTHO05D005530 3.8e-194 682.2 403 83.4
Atru.chr4.1774 Acer truncatum HOM05D003979 ORTHO05D005530 1.6e-173 613.6 433 72.3
Cfa023757 Carpinus fangiana HOM05D003979 ORTHO05D005530 2.5e-166 589.7 601 50.9
Eucgr.H02826 Eucalyptus grandis HOM05D003979 ORTHO05D005530 1.6e-160 570.5 312 88.5
QL07p030448 Quercus lobata HOM05D003979 ORTHO05D000106 8.8e-151 538.1 384 73.2
Eucgr.C02488 Eucalyptus grandis HOM05D003979 ORTHO05D005530 2.9e-130 469.9 340 72.9
HanXRQChr14g0435341 Helianthus annuus HOM05D003979 ORTHO05D005530 3.0e-119 433.3 261 82.8
Manes.03G150102 Manihot esculenta HOM05D003979 ORTHO05D005530 4.0e-103 379.8 277 68.2
TPR.G30672 Trifolium pratense HOM05D003979 ORTHO05D005530 6.4e-93 345.9 216 77.8
CAN.G12.22 Capsicum annuum HOM05D003979 ORTHO05D005530 4.9e-77 293.1 149 93.3
vmacro00506 Vaccinium macrocarpon HOM05D003979 ORTHO05D005530 3.5e-75 287.0 158 87.3
Cfa023448 Carpinus fangiana HOM05D003979 ORTHO05D123299 3.0e-74 283.9 582 33.3
Eucgr.H02825 Eucalyptus grandis HOM05D003979 ORTHO05D015566 4.6e-67 260.0 150 83.3
Cfa020039 Carpinus fangiana HOM05D003979 ORTHO05D015566 2.9e-61 240.7 131 87.0
Duzib268G0265 Durio zibethinus HOM05D003979 ORTHO05D015566 5.1e-58 229.9 133 78.2
QL07p012436 Quercus lobata HOM05D003979 ORTHO05D005530 1.3e-56 225.3 126 84.9
Oeu022341.1 Olea europaea HOM05D003979 ORTHO05D049433 2.9e-53 214.2 178 64.0
THA.LOC104809102 Tarenaya hassleriana HOM05D003979 ORTHO05D049433 1.4e-52 211.8 117 89.7
PGSC0003DMG400028636 Solanum tuberosum HOM05D003979 ORTHO05D015566 9.3e-52 209.1 115 86.1
QL06p023466 Quercus lobata HOM05D003979 ORTHO05D015566 1.0e-50 205.7 114 83.3
Lsat_1_v5_gn_4_162440 Lactuca sativa HOM05D003979 ORTHO05D015566 5.1e-50 203.4 109 89.9
Gohir.D02G124900 Gossypium hirsutum HOM05D003979 ORTHO05D005530 3.4e-46 190.7 105 81.9
Gorai.005G140500 Gossypium raimondii HOM05D003979 ORTHO05D005530 1.9e-44 184.9 143 64.3
Eucgr.C02482 Eucalyptus grandis HOM05D003979 ORTHO05D015566 1.2e-43 182.2 115 75.7
Oeu006718.2 Olea europaea HOM05D003979 ORTHO05D005530 1.0e-42 179.1 252 46.0
CDE04G0146 Ceratophyllum demersum HOM05D003979 ORTHO05D005530 2.8e-40 171.0 120 69.2
TPR.G30661 Trifolium pratense HOM05D003979 ORTHO05D005530 7.7e-38 162.9 172 54.1
TWI36G0080 Tripterygium wilfordii HOM05D003979 ORTHO05D005530 7.9e-35 152.9 127 66.1
Lsat_1_v5_gn_5_133441 Lactuca sativa HOM05D003979 ORTHO05D015566 1.0e-26 125.9 116 58.6
CAN.G12.21 Capsicum annuum HOM05D003979 ORTHO05D015566 2.3e-26 124.8 61 93.4
CAN.G12.20 Capsicum annuum HOM05D003979 ORTHO05D015566 1.7e-24 118.6 70 78.6
SMO361G0618 Selaginella moellendorffii HOM05D003979 ORTHO05D015566 3.5e-22 110.9 212 35.8
TPR.G35859 Trifolium pratense HOM05D003979 ORTHO05D015566 1.7e-21 108.6 56 94.6
Aqoxy226s001 Aquilegia oxysepala HOM05D004107 ORTHO05D004738 2.8e-16 91.3 179 30.2
HPP92_025734 Vanilla planifolia HOM05D003979 ORTHO05D005530 1.8e-15 88.6 45 91.1
TAR362G1054 Trochodendron aralioides HOM05D000447 ORTHO05D000315 2.9e-13 81.3 67 58.2
unitig_899.g15535 Utricularia gibba HOM05D003979 ORTHO05D005530 2.7e-11 74.7 38 92.1


User provided reference genes

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