Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62014918 Chenopodium quinoa HOM05D006143 ORTHO05D007587 3.2e-265 917.9 477 100.0
AUR62031125 Chenopodium quinoa HOM05D006143 ORTHO05D007587 1.3e-229 799.7 434 94.7
EL10Ac8g20474 Beta vulgaris HOM05D006143 ORTHO05D007587 2.5e-185 652.5 478 72.4
Hund23878 Selenicereus undatus HOM05D006143 ORTHO05D007587 3.0e-159 565.8 477 61.6
Ah.01g004290 Amaranthus hybridus HOM05D006143 ORTHO05D007587 3.4e-158 562.4 477 63.7
Sc05g0007290 Simmondsia chinensis HOM05D006143 ORTHO05D007587 6.2e-128 461.8 479 54.1
Dinv17374 Davidia involucrata HOM05D006143 ORTHO05D007587 2.7e-123 446.4 476 51.7
Hma1.2p1_0155F.1_g068560 Hydrangea macrophylla HOM05D006143 ORTHO05D007587 8.7e-114 414.8 476 48.5
GSVIVG01021150001 Vitis vinifera HOM05D006143 ORTHO05D007587 4.8e-112 409.1 462 47.2
CiPaw.10G054900 Carya illinoinensis HOM05D006143 ORTHO05D007587 1.8e-111 407.1 470 46.6
Manes.16G034450 Manihot esculenta HOM05D006143 ORTHO05D007587 3.4e-110 402.9 474 46.2
CSS0012799 Camellia sinensis var. sinensis HOM05D006143 ORTHO05D007587 7.6e-110 401.7 470 47.7
Thecc.06G177300 Theobroma cacao HOM05D006143 ORTHO05D007587 2.1e-107 393.7 473 46.5
Duzib235G0124 Durio zibethinus HOM05D006143 ORTHO05D007587 6.0e-107 392.1 472 46.4
Potri.011G062100 Populus trichocarpa HOM05D006143 ORTHO05D007587 1.8e-106 390.6 467 47.3
Sabra11G0044000 Salix brachista HOM05D006143 ORTHO05D007587 9.6e-105 384.8 467 46.7
Prupe.4G055900 Prunus persica HOM05D006143 ORTHO05D007587 1.2e-102 377.9 468 45.9
MD05G1306600 Malus domestica HOM05D006143 ORTHO05D007587 2.6e-102 376.7 466 45.3
RcHm_v2.0_Chr5g0009801 Rosa chinensis HOM05D006143 ORTHO05D007587 7.6e-102 375.2 469 45.6
Atru.chr10.1746 Acer truncatum HOM05D006143 ORTHO05D007587 1.9e-100 370.5 473 45.5
Aqoxy4G00545 Aquilegia oxysepala HOM05D006143 ORTHO05D007587 9.3e-100 368.2 467 44.8
TWI63G1355 Tripterygium wilfordii HOM05D006143 ORTHO05D007587 9.3e-100 368.2 473 43.1
Eucgr.E03166 Eucalyptus grandis HOM05D006143 ORTHO05D007587 2.1e-99 367.1 474 43.2
PGSC0003DMG400010721 Solanum tuberosum HOM05D006143 ORTHO05D007587 1.8e-98 364.0 479 44.1
FvH4_7g02070 Fragaria vesca HOM05D006143 ORTHO05D007587 3.9e-98 362.8 468 44.2
Lsat_1_v5_gn_4_50941 Lactuca sativa HOM05D006143 ORTHO05D007587 5.7e-97 359.0 483 42.9
Nn1g04309 Nelumbo nucifera HOM05D006143 ORTHO05D007587 7.4e-97 358.6 460 44.3
PSO832G2207 Papaver somniferum HOM05D006143 ORTHO05D007587 7.4e-97 358.6 466 45.1
FAN06G1438 Fragaria x ananassa HOM05D006143 ORTHO05D007587 9.6e-97 358.2 476 43.7
DCAR_007976 Daucus carota HOM05D006143 ORTHO05D007587 1.6e-96 357.5 485 43.1
Peaxi162Scf00875g00320 Petunia axillaris HOM05D006143 ORTHO05D007587 2.1e-96 357.1 499 43.7
ECA234G2393 Erigeron canadensis HOM05D006143 ORTHO05D007587 3.7e-96 356.3 467 44.5
Lalb_Chr16g0384181 Lupinus albus HOM05D006143 ORTHO05D007587 3.7e-96 356.3 466 45.3
HanXRQChr11g0327231 Helianthus annuus HOM05D006143 ORTHO05D007587 2.4e-95 353.6 465 43.2
Phvul.003G056900 Phaseolus vulgaris HOM05D006143 ORTHO05D007587 5.3e-95 352.4 468 42.7
Oeu045072.2 Olea europaea HOM05D006143 ORTHO05D007587 1.2e-94 351.3 461 43.0
Sopen02g022240 Solanum pennellii HOM05D006143 ORTHO05D007587 1.2e-94 351.3 475 43.2
FAN03G1069 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.5e-94 350.9 478 43.5
TPR.G16154 Trifolium pratense HOM05D006143 ORTHO05D007587 2.6e-94 350.1 467 43.5
PSO210G3197 Papaver somniferum HOM05D006143 ORTHO05D007587 1.0e-93 348.2 466 44.4
Lj4g0027541 Lotus japonicus HOM05D006143 ORTHO05D007587 1.3e-93 347.8 466 41.8
FAN11G1643 Fragaria x ananassa HOM05D006143 ORTHO05D007587 6.5e-93 345.5 479 42.4
Gorai.011G031600 Gossypium raimondii HOM05D006143 ORTHO05D007587 8.5e-93 345.1 466 41.0
ClCG03G007960 Citrullus lanatus HOM05D006143 ORTHO05D007587 1.1e-92 344.7 464 42.7
MBI07_g06435_MAGBIO Magnolia biondii HOM05D006143 ORTHO05D007587 1.9e-92 344.0 451 43.5
Cc02_g14290 Coffea canephora HOM05D006143 ORTHO05D007587 2.5e-92 343.6 463 41.7
Gohir.D10G029700 Gossypium hirsutum HOM05D006143 ORTHO05D007587 1.2e-91 341.3 466 40.8
THA.LOC104798414 Tarenaya hassleriana HOM05D006143 ORTHO05D007587 2.1e-91 340.5 463 41.0
Medtr4g087975 Medicago truncatula HOM05D006143 ORTHO05D007587 2.7e-91 340.1 451 45.2
Psat7g118360 Pisum sativum HOM05D006143 ORTHO05D007587 6.1e-91 339.0 471 43.5
MELO3C002630.2 Cucumis melo HOM05D006143 ORTHO05D007587 7.9e-91 338.6 466 42.5
Migut.M01078 Erythranthe guttata HOM05D006143 ORTHO05D007587 1.3e-90 337.8 485 41.9
Glyma.07G203300 Glycine max HOM05D006143 ORTHO05D007587 1.8e-90 337.4 467 41.3
Solyc02g077320.4 Solanum lycopersicum HOM05D006143 ORTHO05D007587 1.8e-90 337.4 467 42.6
Cpa.g.sc7.33 Carica papaya HOM05D006143 ORTHO05D007587 2.3e-90 337.0 465 42.2
Aa31LG6G1190 Aethionema arabicum HOM05D006143 ORTHO05D007587 5.1e-90 335.9 469 42.6
Ciclev10015477m.g Citrus clementina HOM05D006143 ORTHO05D007587 6.7e-90 335.5 415 45.3
COL.COLO4_31385 Corchorus olitorius HOM05D006143 ORTHO05D007587 1.1e-89 334.7 449 43.0
arahy.Tifrunner.gnm1.ann1.W3DLTW Arachis hypogaea HOM05D006143 ORTHO05D007587 1.9e-89 334.0 464 40.3
arahy.Tifrunner.gnm1.ann1.VAEI8B Arachis hypogaea HOM05D006143 ORTHO05D007587 3.3e-89 333.2 470 40.4
PGR042G3042 Punica granatum HOM05D006143 ORTHO05D007587 3.7e-88 329.7 454 42.5
Thhalv10025244m.g Eutrema salsugineum HOM05D006143 ORTHO05D007587 1.1e-87 328.2 466 40.6
Sp7g15570 Schrenkiella parvula HOM05D006143 ORTHO05D007587 1.4e-87 327.8 466 41.0
BcaNung05875 Brassica carinata HOM05D006143 ORTHO05D007587 9.1e-87 325.1 466 40.6
FAN21G2423 Fragaria x ananassa HOM05D006143 ORTHO05D007587 9.1e-87 325.1 479 40.9
Ca_26041_v3 Cicer arietinum L. HOM05D006143 ORTHO05D007587 4.5e-86 322.8 443 43.1
BraA01t00988Z Brassica rapa HOM05D006143 ORTHO05D007587 5.9e-86 322.4 466 40.6
Glyma.13G172400 Glycine max HOM05D006143 ORTHO05D007587 5.9e-86 322.4 470 40.9
Medtr6g039570 Medicago truncatula HOM05D006143 ORTHO05D007587 5.9e-86 322.4 442 42.8
C01p12400 Brassica napus HOM05D006143 ORTHO05D007587 1.0e-85 321.6 466 40.3
AL7G35830 Arabidopsis lyrata HOM05D006143 ORTHO05D007587 1.3e-85 321.2 466 40.3
BcaC09g51506 Brassica carinata HOM05D006143 ORTHO05D007587 1.7e-85 320.9 466 40.3
BolC1t01214H Brassica oleracea HOM05D006143 ORTHO05D007587 3.8e-85 319.7 466 40.3
CARHR225290 Cardamine hirsuta HOM05D006143 ORTHO05D007587 5.0e-85 319.3 466 40.3
Nitab4.5_0011727g0010 Nicotiana tabacum HOM05D006143 ORTHO05D007587 6.5e-85 318.9 459 42.3
Carub.0007s2278 Capsella rubella HOM05D006143 ORTHO05D007587 3.2e-84 316.6 466 39.3
Haze_06321 Corylus avellana HOM05D006143 ORTHO05D007587 5.5e-84 315.8 465 40.4
AT4G18470 Arabidopsis thaliana HOM05D006143 ORTHO05D007587 2.7e-83 313.5 465 40.4
FAN16G0487 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.8e-82 310.8 466 41.0
A01p10420 Brassica napus HOM05D006143 ORTHO05D007587 3.0e-82 310.1 482 39.2
Actinidia39490 Actinidia chinensis HOM05D006143 ORTHO05D007587 2.6e-81 307.0 477 40.5
SGA_v2.0_scaffold16G07658 Striga asiatica HOM05D006143 ORTHO05D007587 3.7e-80 303.1 465 38.5
TAR626G0253 Trochodendron aralioides HOM05D006143 ORTHO05D007587 5.3e-79 299.3 336 48.2
Gohir.A10G029200 Gossypium hirsutum HOM05D006143 ORTHO05D007587 1.7e-77 294.3 436 39.2
Sabra11G0042500 Salix brachista HOM05D006143 ORTHO05D007587 1.4e-76 291.2 467 39.8
Nitab4.5_0000376g0080 Nicotiana tabacum HOM05D006143 ORTHO05D007587 9.4e-76 288.5 444 40.5
Sed0020086 Sechium edule HOM05D006143 ORTHO05D007587 1.0e-74 285.0 416 40.6
Os02g0312800 Oryza sativa ssp. japonica HOM05D006143 ORTHO05D007587 6.7e-74 282.3 459 37.0
Zm00001eb206790 Zea mays HOM05D006143 ORTHO05D007587 2.0e-73 280.8 468 36.8
ATR0602G028 Amborella trichopoda HOM05D006143 ORTHO05D007587 1.1e-71 275.0 469 36.0
CsaV3_1G012630 Cucumis sativus L. HOM05D006143 ORTHO05D007587 9.4e-68 261.9 345 44.9
FvH4_3g08270 Fragaria vesca HOM05D006143 ORTHO05D007587 1.7e-64 251.1 356 42.1
Cfa000554 Carpinus fangiana HOM05D006143 ORTHO05D007587 2.8e-64 250.4 299 45.8
VMungo0251G1209 Vigna mungo HOM05D006143 ORTHO05D007587 2.5e-60 237.3 328 41.8
CDE02G0230 Ceratophyllum demersum HOM05D006143 ORTHO05D007587 1.2e-59 235.0 465 34.2
Eucgr.E02653 Eucalyptus grandis HOM05D006143 ORTHO05D007587 3.7e-56 223.4 302 42.1
unitig_699.g19338 Utricularia gibba HOM05D006143 ORTHO05D007587 3.2e-52 210.3 465 32.3
HPP92_003901 Vanilla planifolia HOM05D006143 ORTHO05D007587 3.2e-52 210.3 327 39.8
Rhsim02G0153000 Rhododendron simsii HOM05D006143 ORTHO05D007587 2.4e-39 167.5 182 48.4
RcHm_v2.0_Chr3g0476981 Rosa chinensis HOM05D006143 ORTHO05D007587 6.4e-32 142.9 367 29.4
MD10G1285900 Malus domestica HOM05D006143 ORTHO05D007587 5.8e-25 119.8 228 34.2
arahy.Tifrunner.gnm1.ann1.74Q5DQ Arachis hypogaea HOM05D006143 ORTHO05D007587 2.7e-22 110.9 154 37.0
arahy.Tifrunner.gnm1.ann1.VQL787 Arachis hypogaea HOM05D006143 ORTHO05D007587 4.6e-22 110.2 131 41.2
arahy.Tifrunner.gnm1.ann1.RYY8E4 Arachis hypogaea HOM05D006143 ORTHO05D007587 3.9e-21 107.1 131 40.5
arahy.Tifrunner.gnm1.ann1.Y1II92 Arachis hypogaea HOM05D006143 ORTHO05D007587 3.9e-21 107.1 131 40.5
Mapoly0071s0015 Marchantia polymorpha HOM05D006143 ORTHO05D007587 1.1e-20 105.5 498 24.3
Nn4g22609 Nelumbo nucifera HOM05D006143 ORTHO05D007587 3.6e-19 100.5 91 59.3
VMungo0251G1903 Vigna mungo HOM05D006143 ORTHO05D007587 6.2e-19 99.8 137 40.9
Pp3c13_1090 Physcomitrium patens HOM05D006143 ORTHO05D007587 8.9e-18 95.9 435 24.8
SEGI_30740 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 3.4e-17 94.0 166 34.9
SEGI_37534 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 3.4e-17 94.0 166 34.9
HPP92_003867 Vanilla planifolia HOM05D006143 ORTHO05D007587 2.2e-16 91.3 253 29.2
TPR.G16261 Trifolium pratense HOM05D006143 ORTHO05D007587 1.9e-15 88.2 193 34.2
arahy.Tifrunner.gnm1.ann1.6ZT1I9 Arachis hypogaea HOM05D006143 ORTHO05D007587 2.4e-15 87.8 115 39.1
arahy.Tifrunner.gnm1.ann1.Y2C9I0 Arachis hypogaea HOM05D006143 ORTHO05D007587 4.6e-14 83.6 118 40.7
HPP92_003900 Vanilla planifolia HOM05D006143 ORTHO05D007587 1.1e-12 79.0 122 36.1
AagrBONN_evm.TU.Sc2ySwM_344.2178 Anthoceros agrestis HOM05D006143 ORTHO05D007587 7.3e-12 76.3 412 24.8
SHI28510 Sapria himalayana HOM05D006143 ORTHO05D007587 7.6e-09 66.2 136 33.1
MD10G1285700 Malus domestica HOM05D006143 ORTHO05D007587 8.4e-08 62.8 77 44.2
MD10G1285800 Malus domestica HOM05D006143 ORTHO05D007587 1.1e-07 62.4 54 50.0
CSS0047646 Camellia sinensis var. sinensis HOM05D000493 ORTHO05D001638 5.4e-07 60.1 64 48.4
SMO117G0244 Selaginella moellendorffii HOM05D006143 ORTHO05D007587 9.3e-07 59.3 77 36.4


User provided reference genes

Program Settings