Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62005394 Chenopodium quinoa HOM05D006564 ORTHO05D007772 2.7e-236 821.6 416 100.0
AUR62014056 Chenopodium quinoa HOM05D006564 ORTHO05D007772 5.6e-210 734.2 416 90.9
EL10Ac6g13691 Beta vulgaris HOM05D006564 ORTHO05D007772 1.3e-150 537.0 494 60.1
TAR622G0653 Trochodendron aralioides HOM05D006564 ORTHO05D007772 3.4e-82 309.7 482 42.7
Hma1.2p1_0536F.1_g173940 Hydrangea macrophylla HOM05D006564 ORTHO05D007772 3.8e-81 306.2 480 42.1
QL03p059806 Quercus lobata HOM05D006564 ORTHO05D007772 1.6e-79 300.8 508 40.6
GSVIVG01013762001 Vitis vinifera HOM05D006564 ORTHO05D007772 3.9e-78 296.2 454 42.1
Hund06003 Selenicereus undatus HOM05D006564 ORTHO05D007772 4.3e-77 292.7 336 50.9
Atru.chr11.2047 Acer truncatum HOM05D006564 ORTHO05D007772 1.3e-76 291.2 471 41.6
Dinv24837 Davidia involucrata HOM05D006564 ORTHO05D007772 3.7e-76 289.7 436 42.0
Potri.010G041900 Populus trichocarpa HOM05D006564 ORTHO05D007772 6.3e-76 288.9 478 41.2
MD16G1094900 Malus domestica HOM05D006564 ORTHO05D007772 4.5e-74 282.7 474 39.9
Ciclev10033458m.g Citrus clementina HOM05D006564 ORTHO05D007772 1.3e-73 281.2 474 39.2
FvH4_4g34230 Fragaria vesca HOM05D006564 ORTHO05D007772 2.9e-73 280.0 461 40.6
Aqoxy3G02914 Aquilegia oxysepala HOM05D006564 ORTHO05D007772 1.9e-72 277.3 479 38.6
PSO832G2728 Papaver somniferum HOM05D006564 ORTHO05D007772 4.2e-72 276.2 491 37.7
Gohir.A06G086900 Gossypium hirsutum HOM05D006564 ORTHO05D007772 6.1e-71 272.3 487 38.4
Gorai.010G099700 Gossypium raimondii HOM05D006564 ORTHO05D007772 5.1e-70 269.2 528 36.2
Prupe.1G251700 Prunus persica HOM05D006564 ORTHO05D007772 2.6e-69 266.9 481 38.3
CANSAT01G1831 Cannabis sativa HOM05D006564 ORTHO05D007772 7.4e-69 265.4 489 38.7
arahy.Tifrunner.gnm1.ann1.T8BVJ1 Arachis hypogaea HOM05D006564 ORTHO05D007772 1.3e-68 264.6 471 38.4
Gohir.D06G086400 Gossypium hirsutum HOM05D006564 ORTHO05D007772 1.7e-68 264.2 516 36.4
arahy.Tifrunner.gnm1.ann1.FI0FWQ Arachis hypogaea HOM05D006564 ORTHO05D007772 2.2e-68 263.8 456 39.3
COL.COLO4_24191 Corchorus olitorius HOM05D006564 ORTHO05D007772 6.3e-68 262.3 446 39.5
Lj2g0026051 Lotus japonicus HOM05D006564 ORTHO05D007772 3.1e-67 260.0 475 37.1
Psat2g104680 Pisum sativum HOM05D006564 ORTHO05D007772 5.9e-66 255.8 469 37.5
TWI75G0104 Tripterygium wilfordii HOM05D006564 ORTHO05D007772 2.2e-65 253.8 470 37.7
Haze_12197 Corylus avellana HOM05D006564 ORTHO05D007772 3.8e-65 253.1 471 38.4
Sc04g0009220 Simmondsia chinensis HOM05D006564 ORTHO05D007772 8.5e-65 251.9 324 46.9
PSO063G0329 Papaver somniferum HOM05D006564 ORTHO05D007772 1.1e-64 251.5 496 36.9
Sp2g04270 Schrenkiella parvula HOM05D006564 ORTHO05D007772 3.2e-64 250.0 471 37.6
Migut.E00581 Erythranthe guttata HOM05D006564 ORTHO05D007772 4.2e-64 249.6 463 38.0
MBI16_g27088_MAGBIO Magnolia biondii HOM05D006564 ORTHO05D007772 9.4e-64 248.4 517 37.3
TPR.G21085 Trifolium pratense HOM05D006564 ORTHO05D007772 9.4e-64 248.4 494 36.0
Nn3g16844 Nelumbo nucifera HOM05D006564 ORTHO05D007772 1.6e-63 247.7 495 36.0
Glyma.01G029900 Glycine max HOM05D006564 ORTHO05D007772 2.1e-63 247.3 467 36.2
Medtr5g034180 Medicago truncatula HOM05D006564 ORTHO05D007772 1.0e-62 245.0 478 36.4
THA.LOC104827560 Tarenaya hassleriana HOM05D006564 ORTHO05D007772 3.0e-62 243.4 481 37.2
Sed0020482 Sechium edule HOM05D006564 ORTHO05D007772 2.6e-61 240.4 483 35.8
CARHR052570 Cardamine hirsuta HOM05D006564 ORTHO05D007772 2.8e-60 236.9 477 35.6
AL2G16230 Arabidopsis lyrata HOM05D006564 ORTHO05D007772 1.1e-59 235.0 477 35.8
SalBow1G6981 Salvia bowleyana HOM05D006564 ORTHO05D007772 1.8e-59 234.2 464 37.7
Carub.0002s0487 Capsella rubella HOM05D006564 ORTHO05D007772 5.3e-59 232.6 485 35.9
AT1G60460 Arabidopsis thaliana HOM05D006564 ORTHO05D007772 1.2e-58 231.5 485 35.1
Rhsim12G0044200 Rhododendron simsii HOM05D006564 ORTHO05D007772 1.2e-58 231.5 486 36.2
BolC1t03666H Brassica oleracea HOM05D006564 ORTHO05D007772 4.5e-58 229.6 478 35.6
Aa31LG2G9990 Aethionema arabicum HOM05D006564 ORTHO05D007772 3.8e-57 226.5 480 36.5
Peaxi162Scf00075g02124 Petunia axillaris HOM05D006564 ORTHO05D007772 3.8e-57 226.5 449 36.5
PGR119G0202 Punica granatum HOM05D006564 ORTHO05D007772 5.0e-57 226.1 476 34.9
BcaC09g49405 Brassica carinata HOM05D006564 ORTHO05D007772 8.5e-57 225.3 477 35.4
A01p29270 Brassica napus HOM05D006564 ORTHO05D007772 1.9e-56 224.2 475 35.6
C01p37040 Brassica napus HOM05D006564 ORTHO05D007772 4.2e-56 223.0 477 35.2
BraA01t03060Z Brassica rapa HOM05D006564 ORTHO05D007772 7.2e-56 222.2 485 34.8
ECA234G3669 Erigeron canadensis HOM05D006564 ORTHO05D007772 3.6e-55 219.9 511 32.7
BcaB04g20267 Brassica carinata HOM05D006564 ORTHO05D007772 6.1e-55 219.2 508 36.2
Thhalv10023451m.g Eutrema salsugineum HOM05D006564 ORTHO05D007772 1.0e-54 218.4 460 34.1
Nitab4.5_0004611g0020 Nicotiana tabacum HOM05D006564 ORTHO05D007772 1.3e-52 211.5 482 33.8
VMungo1215G0480 Vigna mungo HOM05D006564 ORTHO05D007772 3.7e-52 209.9 431 34.8
CsaV3_2G024630 Cucumis sativus L. HOM05D006564 ORTHO05D007772 1.8e-51 207.6 481 33.9
Cfa009164 Carpinus fangiana HOM05D006564 ORTHO05D007772 2.0e-50 204.1 341 39.6
FAN07G0775 Fragaria x ananassa HOM05D006564 ORTHO05D007772 1.0e-49 201.8 489 34.2
Manes.13G029100 Manihot esculenta HOM05D006564 ORTHO05D007772 2.2e-49 200.7 358 37.7
RcHm_v2.0_Chr4g0443691 Rosa chinensis HOM05D006564 ORTHO05D007772 2.9e-49 200.3 275 46.9
Thecc.02G252200 Theobroma cacao HOM05D006564 ORTHO05D007772 6.5e-49 199.1 278 43.9
Solyc06g065620.2 Solanum lycopersicum HOM05D006564 ORTHO05D007772 8.5e-49 198.7 481 34.5
Sabra10G0025500 Salix brachista HOM05D006564 ORTHO05D007772 1.5e-48 198.0 453 34.9
CiPaw.05G152600 Carya illinoinensis HOM05D006564 ORTHO05D007772 3.2e-48 196.8 379 37.2
FAN17G1546 Fragaria x ananassa HOM05D006564 ORTHO05D007772 3.2e-48 196.8 278 45.0
Actinidia01701 Actinidia chinensis HOM05D006564 ORTHO05D007772 4.2e-48 196.4 277 45.8
MELO3C010665.2 Cucumis melo HOM05D006564 ORTHO05D007772 4.7e-47 193.0 496 31.7
Cc11_g15240 Coffea canephora HOM05D006564 ORTHO05D007772 6.8e-46 189.1 409 35.5
ClCG08G017970 Citrullus lanatus HOM05D006564 ORTHO05D007772 7.5e-45 185.7 554 29.8
SGA_v2.0_scaffold276G46631 Striga asiatica HOM05D006564 ORTHO05D007772 3.1e-43 180.3 452 31.9
Oeu056406.1 Olea europaea HOM05D006564 ORTHO05D007772 3.5e-42 176.8 344 37.2
Lsat_1_v5_gn_4_5380 Lactuca sativa HOM05D006564 ORTHO05D007772 1.4e-38 164.9 348 35.1
Hund06002 Selenicereus undatus HOM05D006564 ORTHO05D007772 1.5e-37 161.4 152 57.2
Phvul.002G070600 Phaseolus vulgaris HOM05D006564 ORTHO05D007772 2.6e-37 160.6 426 31.9
Lalb_Chr05g0216821 Lupinus albus HOM05D006564 ORTHO05D007772 4.4e-37 159.8 284 38.0
PGSC0003DMG401026086 Solanum tuberosum HOM05D006564 ORTHO05D007772 1.2e-34 151.8 274 38.7
Lj3A1053T43 Lonicera japonica HOM05D006564 ORTHO05D007772 2.8e-31 140.6 134 53.7
TAR374G1125 Trochodendron aralioides HOM05D006564 ORTHO05D007772 3.7e-28 130.2 181 45.3
RcHm_v2.0_Chr4g0443681 Rosa chinensis HOM05D006564 ORTHO05D007772 6.4e-28 129.4 128 50.8
Ca_03150_v3 Cicer arietinum L. HOM05D006564 ORTHO05D007772 1.2e-26 125.2 136 50.0
FAN22G1362 Fragaria x ananassa HOM05D006564 ORTHO05D007772 1.6e-26 124.8 137 49.6
HPP92_021828 Vanilla planifolia HOM05D006564 ORTHO05D007772 2.0e-26 124.4 376 29.3
Lalb_Chr05g0216811 Lupinus albus HOM05D006564 ORTHO05D007772 2.7e-26 124.0 127 48.0
Eucgr.H02586 Eucalyptus grandis HOM05D006564 ORTHO05D007772 1.3e-25 121.7 111 55.0
FAN12G0482 Fragaria x ananassa HOM05D006564 ORTHO05D007772 2.8e-23 114.0 111 51.4
Nitab4.5_0003128g0060 Nicotiana tabacum HOM05D006564 ORTHO05D007772 8.0e-23 112.5 279 31.2
Ah.03g137970 Amaranthus hybridus HOM05D005085 ORTHO05D006135 8.9e-22 109.0 115 55.7
Cpa.g.sc69.59 Carica papaya HOM05D006564 ORTHO05D007772 9.8e-21 105.5 168 38.1
ClCG08G018020 Citrullus lanatus HOM05D006564 ORTHO05D007772 2.9e-20 104.0 134 43.3
Migut.E00617 Erythranthe guttata HOM05D006564 ORTHO05D007772 1.1e-19 102.1 176 41.5
Actinidia01700 Actinidia chinensis HOM05D006564 ORTHO05D007772 4.1e-19 100.1 97 53.6
ATR1091G047 Amborella trichopoda HOM05D006564 ORTHO05D007772 1.2e-18 98.6 91 56.0
CDE07G0681 Ceratophyllum demersum HOM05D006564 ORTHO05D007772 3.5e-18 97.1 223 30.0
unitig_744.g23977 Utricularia gibba HOM05D006564 ORTHO05D007772 4.3e-16 90.1 119 45.4
Sopen06g024060 Solanum pennellii HOM05D006564 ORTHO05D007772 2.8e-15 87.4 196 34.7
Zm00001eb227420 Zea mays HOM05D006564 ORTHO05D007772 1.8e-14 84.7 134 38.8
SHI17545 Sapria himalayana HOM05D006564 ORTHO05D007772 2.3e-14 84.3 144 36.8
SEGI_36736 Sequoiadendron giganteum HOM05D006564 ORTHO05D007772 4.0e-14 83.6 107 40.2
SHI17558 Sapria himalayana HOM05D006564 ORTHO05D007772 1.5e-13 81.6 83 50.6
AagrBONN_evm.TU.Sc2ySwM_362.2494 Anthoceros agrestis HOM05D006564 ORTHO05D007772 3.4e-13 80.5 419 24.8
CDE06G0043 Ceratophyllum demersum HOM05D006564 ORTHO05D007772 3.7e-12 77.0 89 46.1
Lj3A1053G47 Lonicera japonica HOM05D006564 ORTHO05D007772 7.1e-11 72.8 122 42.6
HanXRQChr12g0383591 Helianthus annuus HOM05D006564 ORTHO05D007772 9.2e-11 72.4 86 45.3
Gohir.1Z049603 Gossypium hirsutum HOM05D006564 ORTHO05D007772 7.3e-08 62.8 53 62.3
SEGI_21655 Sequoiadendron giganteum HOM05D006564 ORTHO05D007772 8.1e-07 59.3 160 30.6
Gohir.D06G182100 Gossypium hirsutum HOM05D006564 ORTHO05D007772 4.0e-06 57.0 61 41.0
Os06g0708200 Oryza sativa ssp. japonica HOM05D006564 ORTHO05D007772 5.2e-06 56.6 115 35.7
Migut.E00618 Erythranthe guttata HOM05D006564 ORTHO05D007772 6.8e-06 56.2 64 50.0


User provided reference genes

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