Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62001034 Chenopodium quinoa HOM05D005810 ORTHO05D007279 0.0e+00 1494.6 761 100.0
AUR62004921 Chenopodium quinoa HOM05D005810 ORTHO05D007279 0.0e+00 1190.6 780 81.3
EL10Ac4g09107 Beta vulgaris HOM05D005810 ORTHO05D007279 3.9e-302 1041.2 776 71.4
Ah.06g192190 Amaranthus hybridus HOM05D005810 ORTHO05D007279 2.0e-277 959.1 788 66.6
Hund06958 Selenicereus undatus HOM05D005810 ORTHO05D007279 1.6e-242 843.2 773 62.5
CSS0013071 Camellia sinensis var. sinensis HOM05D005810 ORTHO05D007279 1.5e-240 836.6 740 60.5
COL.COLO4_15299 Corchorus olitorius HOM05D005810 ORTHO05D007279 1.4e-238 830.1 729 60.4
Cfa006452 Carpinus fangiana HOM05D005810 ORTHO05D007279 4.4e-237 825.1 737 59.8
QL03p024871 Quercus lobata HOM05D005810 ORTHO05D007279 9.9e-237 823.9 735 59.9
GSVIVG01021833001 Vitis vinifera HOM05D005810 ORTHO05D007279 2.9e-236 822.4 740 59.9
CSS0027419 Camellia sinensis var. sinensis HOM05D005810 ORTHO05D007279 4.2e-235 818.5 740 59.7
Thecc.05G287300 Theobroma cacao HOM05D005810 ORTHO05D007279 3.6e-231 805.4 751 57.8
Sed0015078 Sechium edule HOM05D005810 ORTHO05D007279 4.8e-231 805.1 727 60.2
Duzib177G1000 Durio zibethinus HOM05D005810 ORTHO05D007279 1.4e-230 803.5 751 57.4
RcHm_v2.0_Chr3g0451831 Rosa chinensis HOM05D005810 ORTHO05D007279 3.1e-230 802.4 777 57.0
THA.LOC104821678 Tarenaya hassleriana HOM05D005810 ORTHO05D007279 1.2e-229 800.4 773 57.7
Potri.005G051400 Populus trichocarpa HOM05D005810 ORTHO05D007279 6.4e-228 794.7 733 59.1
Eucgr.B01694 Eucalyptus grandis HOM05D005810 ORTHO05D007279 2.4e-227 792.7 718 59.7
Rhsim05G0160900 Rhododendron simsii HOM05D005810 ORTHO05D007279 2.4e-227 792.7 736 57.7
Ciclev10003382m.g Citrus clementina HOM05D005810 ORTHO05D007279 3.2e-227 792.3 742 58.9
SalBow8G0563 Salvia bowleyana HOM05D005810 ORTHO05D007279 2.7e-226 789.3 764 57.2
PSO832G3650 Papaver somniferum HOM05D005810 ORTHO05D007279 6.0e-226 788.1 791 56.1
CANSAT54G2140 Cannabis sativa HOM05D005810 ORTHO05D007279 1.0e-225 787.3 732 58.3
PGR031G1118 Punica granatum HOM05D005810 ORTHO05D007279 1.8e-225 786.6 711 60.1
Prupe.6G340900 Prunus persica HOM05D005810 ORTHO05D007279 3.9e-225 785.4 764 56.9
FvH4_6g03330 Fragaria vesca HOM05D005810 ORTHO05D007279 1.5e-224 783.5 750 56.4
PSO210G1835 Papaver somniferum HOM05D005810 ORTHO05D007279 1.5e-224 783.5 729 59.0
MD04G1221700 Malus domestica HOM05D005810 ORTHO05D007279 5.6e-224 781.6 723 59.6
Gohir.A11G254200 Gossypium hirsutum HOM05D005810 ORTHO05D007279 2.1e-223 779.6 741 57.0
AL3G14980 Arabidopsis lyrata HOM05D005810 ORTHO05D007279 2.8e-223 779.2 774 55.8
CARHR079070 Cardamine hirsuta HOM05D005810 ORTHO05D007279 8.1e-223 777.7 774 55.4
MELO3C024669.2 Cucumis melo HOM05D005810 ORTHO05D007279 1.1e-222 777.3 718 59.3
Sp3g03650 Schrenkiella parvula HOM05D005810 ORTHO05D007279 1.1e-222 777.3 761 56.1
Migut.B01074 Erythranthe guttata HOM05D005810 ORTHO05D007279 2.4e-222 776.2 776 56.3
arahy.Tifrunner.gnm1.ann1.BBX725 Arachis hypogaea HOM05D005810 ORTHO05D007279 4.0e-222 775.4 735 58.0
Gorai.007G284000 Gossypium raimondii HOM05D005810 ORTHO05D007279 4.0e-222 775.4 745 56.9
Gohir.D11G264000 Gossypium hirsutum HOM05D005810 ORTHO05D007279 6.9e-222 774.6 738 57.0
AT3G04820 Arabidopsis thaliana HOM05D005810 ORTHO05D007279 2.0e-221 773.1 774 55.7
Aqoxy5G00419 Aquilegia oxysepala HOM05D005810 ORTHO05D007279 3.4e-221 772.3 764 56.2
ClCG06G009190 Citrullus lanatus HOM05D005810 ORTHO05D007279 3.4e-221 772.3 767 57.0
arahy.Tifrunner.gnm1.ann1.E80190 Arachis hypogaea HOM05D005810 ORTHO05D007279 5.8e-221 771.5 735 57.7
Cpa.g.sc117.72 Carica papaya HOM05D005810 ORTHO05D007279 9.9e-221 770.8 768 56.5
Thhalv10022286m.g Eutrema salsugineum HOM05D005810 ORTHO05D007279 9.9e-221 770.8 761 56.4
Phvul.006G100200 Phaseolus vulgaris HOM05D005810 ORTHO05D007279 9.9e-221 770.8 729 58.2
Glyma.03G245900 Glycine max HOM05D005810 ORTHO05D007279 2.2e-220 769.6 729 57.9
Lalb_Chr18g0045021 Lupinus albus HOM05D005810 ORTHO05D007279 2.2e-220 769.6 723 59.1
A03p33850 Brassica napus HOM05D005810 ORTHO05D007279 2.9e-220 769.2 766 56.1
BraA03t12559Z Brassica rapa HOM05D005810 ORTHO05D007279 2.9e-220 769.2 766 56.1
VMungo0222G0001 Vigna mungo HOM05D005810 ORTHO05D007279 2.5e-219 766.1 729 57.6
BcaB04g19298 Brassica carinata HOM05D005810 ORTHO05D007279 1.6e-218 763.5 709 58.0
C03p41160 Brassica napus HOM05D005810 ORTHO05D007279 2.7e-218 762.7 761 55.7
BcaC01g04347 Brassica carinata HOM05D005810 ORTHO05D007279 3.5e-218 762.3 760 55.7
BolC3t16404H Brassica oleracea HOM05D005810 ORTHO05D007279 4.6e-218 761.9 761 56.0
Ca_09411_v3 Cicer arietinum L. HOM05D005810 ORTHO05D007279 6.7e-217 758.1 739 55.8
Lj1g0027742 Lotus japonicus HOM05D005810 ORTHO05D007279 1.9e-216 756.5 732 56.7
CAN.G134.120 Capsicum annuum HOM05D005810 ORTHO05D007279 4.3e-216 755.4 696 58.3
HanXRQChr12g0379621 Helianthus annuus HOM05D005810 ORTHO05D007279 1.2e-213 747.3 716 57.8
Peaxi162Scf00282g00136 Petunia axillaris HOM05D005810 ORTHO05D007279 4.5e-213 745.3 729 56.7
Nitab4.5_0005059g0010 Nicotiana tabacum HOM05D005810 ORTHO05D007279 1.4e-211 740.3 781 54.2
CDE05G3473 Ceratophyllum demersum HOM05D005810 ORTHO05D007279 1.2e-210 737.3 721 56.7
Medtr7g114850 Medicago truncatula HOM05D005810 ORTHO05D007279 3.5e-210 735.7 765 53.9
ECA232G3974 Erigeron canadensis HOM05D005810 ORTHO05D007279 1.0e-209 734.2 750 54.8
Glyma.19G243400 Glycine max HOM05D005810 ORTHO05D007279 1.0e-209 734.2 725 56.6
vmacro14215 Vaccinium macrocarpon HOM05D005810 ORTHO05D007279 2.3e-209 733.0 785 52.5
MD12G1237800 Malus domestica HOM05D005810 ORTHO05D007279 6.7e-209 731.5 639 59.8
DCAR_006618 Daucus carota HOM05D005810 ORTHO05D007279 1.5e-208 730.3 769 53.3
Aa31LG5G15210 Aethionema arabicum HOM05D005810 ORTHO05D007279 1.6e-207 726.9 817 51.7
Sc09g0003830 Simmondsia chinensis HOM05D005810 ORTHO05D007279 2.8e-207 726.1 620 63.2
Psat3g008040 Pisum sativum HOM05D005810 ORTHO05D007279 3.7e-207 725.7 736 53.7
Lsat_1_v5_gn_5_37760 Lactuca sativa HOM05D005810 ORTHO05D007279 1.7e-196 690.3 663 56.9
Carub.0003s0400 Capsella rubella HOM05D005810 ORTHO05D007279 5.0e-196 688.7 654 56.6
CiPaw.07G064800 Carya illinoinensis HOM05D005810 ORTHO05D007279 5.7e-192 675.2 576 60.9
ATR0665G477 Amborella trichopoda HOM05D005810 ORTHO05D007279 1.2e-189 667.5 744 51.5
Manes.08G132300 Manihot esculenta HOM05D005810 ORTHO05D007279 4.1e-182 642.5 631 56.6
HPP92_028013 Vanilla planifolia HOM05D005810 ORTHO05D007279 5.3e-182 642.1 708 51.3
CsaV3_1G045590 Cucumis sativus L. HOM05D005810 ORTHO05D007279 3.0e-177 626.3 611 56.6
Manes.09G154600 Manihot esculenta HOM05D005810 ORTHO05D007279 3.0e-177 626.3 567 60.0
Cc02_g31830 Coffea canephora HOM05D005810 ORTHO05D007279 6.8e-177 625.2 539 61.8
Zm00001eb328420 Zea mays HOM05D005810 ORTHO05D007279 4.8e-175 619.0 725 49.2
FAN05G1843 Fragaria x ananassa HOM05D005810 ORTHO05D007279 2.9e-172 609.8 711 50.5
Lj7C488G4 Lonicera japonica HOM05D005810 ORTHO05D007279 2.5e-171 606.7 735 49.8
MBI11_g10322_MAGBIO Magnolia biondii HOM05D005810 ORTHO05D007279 4.2e-171 605.9 786 48.0
Atru.chr2.784 Acer truncatum HOM05D005810 ORTHO05D007279 7.2e-171 605.1 487 64.5
TPR.G6991 Trifolium pratense HOM05D005810 ORTHO05D007279 2.1e-170 603.6 594 56.2
unitig_37.g12634 Utricularia gibba HOM05D005810 ORTHO05D007279 4.1e-166 589.3 721 47.0
Pp3c18_8560 Physcomitrium patens HOM05D005810 ORTHO05D007279 9.5e-163 578.2 767 44.1
Mapoly0092s0013 Marchantia polymorpha HOM05D005810 ORTHO05D007279 6.1e-162 575.5 773 44.4
SMO351G0210 Selaginella moellendorffii HOM05D005810 ORTHO05D007279 6.4e-151 538.9 730 44.0
Haze_04339 Corylus avellana HOM05D005810 ORTHO05D007279 1.9e-142 510.8 416 63.0
Solyc01g097600.2 Solanum lycopersicum HOM05D005810 ORTHO05D007279 1.3e-140 504.6 351 70.9
Sopen01g041230 Solanum pennellii HOM05D005810 ORTHO05D007279 5.1e-140 502.7 351 70.7
TAR365G0727 Trochodendron aralioides HOM05D005810 ORTHO05D007279 8.3e-135 485.3 536 53.2
Eucgr.B02108 Eucalyptus grandis HOM05D005810 ORTHO05D007279 6.0e-133 479.2 474 56.1
FAN14G4259 Fragaria x ananassa HOM05D005810 ORTHO05D007279 1.1e-129 468.4 361 65.1
FAN05G0700 Fragaria x ananassa HOM05D005810 ORTHO05D007279 2.6e-128 463.8 361 64.0
Zm00001eb352870 Zea mays HOM05D005810 ORTHO05D007279 1.1e-126 458.4 417 56.4
FAN02G1150 Fragaria x ananassa HOM05D005810 ORTHO05D007279 1.2e-125 454.9 361 63.4
Os05g0509300 Oryza sativa ssp. japonica HOM05D005810 ORTHO05D007279 3.8e-119 433.3 361 60.1
Oeu060673.3 Olea europaea HOM05D005810 ORTHO05D007279 2.4e-113 414.1 816 37.7
CBR_g36821 Chara braunii HOM05D005810 ORTHO05D007279 1.2e-112 411.8 852 35.0
SMO364G0521 Selaginella moellendorffii HOM05D005810 ORTHO05D007279 1.0e-108 398.7 727 38.1
MCO09G788 Micromonas commoda HOM05D005810 ORTHO05D007279 1.5e-107 394.8 780 35.6
Dinv13659 Davidia involucrata HOM05D005810 ORTHO05D007279 2.0e-104 384.4 312 64.1
Os01g0773000 Oryza sativa ssp. japonica HOM05D005810 ORTHO05D007279 1.0e-95 355.5 360 53.9
AagrBONN_evm.TU.Sc2ySwM_362.2883 Anthoceros agrestis HOM05D005810 ORTHO05D007279 5.7e-91 339.7 361 51.0
PRCOL_00005025 Prasinoderma coloniale HOM05D005810 ORTHO05D007279 3.7e-82 310.5 774 32.8
Dinv13660 Davidia involucrata HOM05D005810 ORTHO05D007279 4.2e-78 297.0 338 50.6
Nitab4.5_0005729g0060 Nicotiana tabacum HOM05D005810 ORTHO05D007279 1.1e-67 262.3 201 64.7
Nitab4.5_0005729g0080 Nicotiana tabacum HOM05D005810 ORTHO05D007279 2.0e-64 251.5 206 64.1
CsaV3_UNG004080 Cucumis sativus L. HOM05D005810 ORTHO05D007279 2.7e-61 241.1 277 49.8
SGA_v2.0_scaffold92G28303 Striga asiatica HOM05D005810 ORTHO05D007279 2.3e-60 238.0 192 62.0
Haze_04340 Corylus avellana HOM05D005810 ORTHO05D007279 3.4e-59 234.2 242 55.8
AagrBONN_evm.TU.Sc2ySwM_362.2882 Anthoceros agrestis HOM05D005810 ORTHO05D007279 8.3e-58 229.6 331 44.4
Zm00001eb281050 Zea mays HOM05D005810 ORTHO05D007279 1.9e-54 218.4 179 62.6
Nitab4.5_0005729g0070 Nicotiana tabacum HOM05D005810 ORTHO05D007279 3.2e-54 217.6 244 50.4
Zm00001eb054900 Zea mays HOM05D005810 ORTHO05D007279 2.0e-51 208.4 188 59.0
Cre01.g007651 Chlamydomonas reinhardtii HOM05D005810 ORTHO05D007279 7.7e-48 196.4 658 29.0
TPR.G21485 Trifolium pratense HOM05D005810 ORTHO05D007279 2.8e-45 188.0 167 57.5
Atru.chr2.785 Acer truncatum HOM05D005810 ORTHO05D007279 9.2e-41 172.9 152 57.2
Cc02_g31840 Coffea canephora HOM05D005810 ORTHO05D007279 8.6e-39 166.4 192 49.5
HPP92_018612 Vanilla planifolia HOM05D005810 ORTHO05D007279 5.6e-38 163.7 222 42.8
SHI07783 Sapria himalayana HOM05D000023 ORTHO05D000014 1.7e-31 142.1 135 56.3
ClCG06G009160 Citrullus lanatus HOM05D005810 ORTHO05D007279 2.4e-25 121.7 155 49.0
FAN09G1409 Fragaria x ananassa HOM05D005810 ORTHO05D007279 1.8e-20 105.5 149 47.0
CsaV3_UNG004060 Cucumis sativus L. HOM05D005810 ORTHO05D007279 3.1e-20 104.8 130 52.3
Sopen01g041220 Solanum pennellii HOM05D005810 ORTHO05D007279 4.0e-20 104.4 131 48.1
CsaV3_1G045610 Cucumis sativus L. HOM05D005810 ORTHO05D007279 6.8e-20 103.6 129 51.9
Hma1.2p1_0083F.1_g042850 Hydrangea macrophylla HOM05D005810 ORTHO05D007279 2.1e-16 92.0 134 45.5
SHI07786 Sapria himalayana HOM05D005810 ORTHO05D007279 1.9e-14 85.5 54 74.1
Mapoly0081s0042 Marchantia polymorpha HOM05D005810 ORTHO05D007279 2.0e-11 75.5 51 68.6
Mapoly0027s0098 Marchantia polymorpha HOM05D005810 ORTHO05D007279 3.4e-11 74.7 76 52.6
MBI11_g02497_MAGBIO Magnolia biondii HOM05D005810 ORTHO05D007279 5.8e-11 73.9 81 54.3
Lsat_1_v5_gn_5_94521 Lactuca sativa HOM05D000428 ORTHO05D022850 2.5e-06 58.5 65 52.3


User provided reference genes

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