Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1089G128 Amborella trichopoda HOM05D005817 ORTHO05D007140 3.1e-165 585.1 303 100.0
TAR376G0556 Trochodendron aralioides HOM05D005817 ORTHO05D007140 2.2e-123 446.0 305 76.4
TAR628G1209 Trochodendron aralioides HOM05D005817 ORTHO05D007140 1.2e-121 440.3 305 76.7
Aqoxy6G00025 Aquilegia oxysepala HOM05D005817 ORTHO05D007140 8.8e-120 434.1 305 74.1
Nn5g27184 Nelumbo nucifera HOM05D005817 ORTHO05D007140 2.0e-116 422.9 305 74.8
Phvul.003G075900 Phaseolus vulgaris HOM05D005817 ORTHO05D007140 2.0e-116 422.9 305 73.4
Hma1.2p1_0052F.1_g030020 Hydrangea macrophylla HOM05D005817 ORTHO05D007140 4.5e-116 421.8 306 73.9
PSO017G5300 Papaver somniferum HOM05D005817 ORTHO05D007140 1.1e-114 417.2 305 70.5
Ca_13529_v3 Cicer arietinum L. HOM05D005817 ORTHO05D007140 3.2e-114 415.6 303 72.3
PSO170G5162 Papaver somniferum HOM05D005817 ORTHO05D007140 3.2e-114 415.6 305 70.5
arahy.Tifrunner.gnm1.ann1.86KQ48 Arachis hypogaea HOM05D005817 ORTHO05D007140 5.5e-114 414.8 323 70.0
CSS0044256 Camellia sinensis var. sinensis HOM05D005817 ORTHO05D007140 7.2e-114 414.5 306 73.2
Prupe.1G585700 Prunus persica HOM05D005817 ORTHO05D007140 1.2e-113 413.7 305 71.8
arahy.Tifrunner.gnm1.ann1.NEQE4P Arachis hypogaea HOM05D005817 ORTHO05D007140 1.6e-113 413.3 323 69.7
MD08G1248300 Malus domestica HOM05D005817 ORTHO05D007140 1.6e-113 413.3 303 71.6
CANSAT01G0715 Cannabis sativa HOM05D005817 ORTHO05D007140 2.1e-113 412.9 303 72.3
QL02p103359 Quercus lobata HOM05D005817 ORTHO05D007140 2.1e-113 412.9 301 73.4
Lalb_Chr07g0176811 Lupinus albus HOM05D005817 ORTHO05D007140 4.7e-113 411.8 303 71.3
CiPaw.06G176700 Carya illinoinensis HOM05D005817 ORTHO05D007140 1.0e-112 410.6 301 72.4
MD15G1443200 Malus domestica HOM05D005817 ORTHO05D007140 1.4e-112 410.2 305 71.1
CsaV3_5G027420 Cucumis sativus L. HOM05D005817 ORTHO05D007140 1.8e-112 409.8 303 72.9
Lj4g0018327 Lotus japonicus HOM05D005817 ORTHO05D007140 3.0e-112 409.1 307 71.3
Glyma.07G272500 Glycine max HOM05D005817 ORTHO05D007140 8.8e-112 407.5 302 70.9
Actinidia01635 Actinidia chinensis HOM05D005817 ORTHO05D007140 1.5e-111 406.8 300 72.3
Oeu028476.1 Olea europaea HOM05D005817 ORTHO05D007140 1.5e-111 406.8 302 70.2
Oeu028475.1 Olea europaea HOM05D005817 ORTHO05D007140 2.6e-111 406.0 302 70.2
Eucgr.I02797 Eucalyptus grandis HOM05D005817 ORTHO05D007140 5.7e-111 404.8 303 71.9
Cc02_g23610 Coffea canephora HOM05D005817 ORTHO05D007140 9.7e-111 404.1 302 71.9
Sed0006174 Sechium edule HOM05D005817 ORTHO05D007140 1.3e-110 403.7 304 71.4
CDE08G0344 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 1.1e-109 400.6 303 71.9
Psat4g000960 Pisum sativum HOM05D005817 ORTHO05D007140 1.1e-109 400.6 303 70.6
Solyc01g103020.4 Solanum lycopersicum HOM05D005817 ORTHO05D007140 1.1e-109 400.6 302 70.5
CAN.G855.54 Capsicum annuum HOM05D005817 ORTHO05D007140 4.1e-109 398.7 300 71.0
Nitab4.5_0007689g0010 Nicotiana tabacum HOM05D005817 ORTHO05D007140 5.3e-109 398.3 300 70.3
TPR.G6004 Trifolium pratense HOM05D005817 ORTHO05D007140 5.3e-109 398.3 306 70.3
EL10Ac6g13990 Beta vulgaris HOM05D005817 ORTHO05D007140 7.0e-109 397.9 312 68.9
PGSC0003DMG400020713 Solanum tuberosum HOM05D005817 ORTHO05D007140 9.1e-109 397.5 302 70.2
TWI14G0757 Tripterygium wilfordii HOM05D005817 ORTHO05D007140 9.1e-109 397.5 305 70.8
Gohir.D06G122800 Gossypium hirsutum HOM05D005817 ORTHO05D007140 1.2e-108 397.1 302 70.5
Ciclev10002025m.g Citrus clementina HOM05D005817 ORTHO05D007140 1.6e-108 396.7 308 70.5
PGR142G3472 Punica granatum HOM05D005817 ORTHO05D007140 2.7e-108 396.0 303 70.3
Gorai.010G142900 Gossypium raimondii HOM05D005817 ORTHO05D007140 3.5e-108 395.6 302 70.2
Thecc.06G019900 Theobroma cacao HOM05D005817 ORTHO05D007140 4.5e-108 395.2 302 71.2
Medtr4g134630 Medicago truncatula HOM05D005817 ORTHO05D007140 5.9e-108 394.8 299 70.9
Atru.chr6.226 Acer truncatum HOM05D005817 ORTHO05D007140 5.0e-107 391.7 308 70.5
Gohir.A06G115800 Gossypium hirsutum HOM05D005817 ORTHO05D007140 6.5e-107 391.3 302 69.5
Rhsim05G0115500 Rhododendron simsii HOM05D005817 ORTHO05D007140 6.5e-107 391.3 353 62.3
CDE07G1199 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 8.5e-107 391.0 303 70.0
HanXRQChr15g0469671 Helianthus annuus HOM05D005817 ORTHO05D007140 1.5e-106 390.2 305 69.5
SGA_v2.0_scaffold8G04460 Striga asiatica HOM05D005817 ORTHO05D007140 1.5e-106 390.2 302 68.2
RcHm_v2.0_Chr7g0219661 Rosa chinensis HOM05D005817 ORTHO05D007140 3.2e-106 389.0 303 68.6
Duzib160G0844 Durio zibethinus HOM05D005817 ORTHO05D007140 7.2e-106 387.9 302 69.5
Lsat_1_v5_gn_9_83341 Lactuca sativa HOM05D005817 ORTHO05D007140 1.6e-105 386.7 300 69.3
COL.COLO4_31118 Corchorus olitorius HOM05D005817 ORTHO05D007140 2.3e-104 382.9 342 64.9
Lj9C259G5 Lonicera japonica HOM05D001465 ORTHO05D001434 3.0e-104 382.5 284 73.2
Sp2g13800 Schrenkiella parvula HOM05D005817 ORTHO05D007140 3.4e-103 379.0 305 67.2
Ah.03g136770 Amaranthus hybridus HOM05D005817 ORTHO05D007140 7.5e-103 377.9 317 66.2
FvH4_5g27830 Fragaria vesca HOM05D005817 ORTHO05D007140 3.7e-102 375.6 304 66.1
FAN18G1253 Fragaria x ananassa HOM05D005817 ORTHO05D007140 3.7e-102 375.6 304 66.1
AT2G02570 Arabidopsis thaliana HOM05D005817 ORTHO05D007140 2.4e-101 372.9 301 65.1
Carub.0005s0157 Capsella rubella HOM05D005817 ORTHO05D007140 3.1e-101 372.5 304 66.1
Haze_09983 Corylus avellana HOM05D005817 ORTHO05D007140 3.1e-101 372.5 368 59.0
Sabra01G0174300 Salix brachista HOM05D005817 ORTHO05D007140 4.1e-101 372.1 327 64.2
Migut.N00865 Erythranthe guttata HOM05D005817 ORTHO05D007140 2.0e-100 369.8 300 65.3
MBI06_g16620_MAGBIO Magnolia biondii HOM05D005817 ORTHO05D007140 2.7e-100 369.4 264 74.2
Thhalv10004677m.g Eutrema salsugineum HOM05D005817 ORTHO05D007140 7.7e-100 367.9 305 65.6
vmacro19830 Vaccinium macrocarpon HOM05D005817 ORTHO05D007140 1.3e-99 367.1 282 69.5
THA.LOC104824089 Tarenaya hassleriana HOM05D005817 ORTHO05D007140 3.8e-99 365.5 302 66.9
AUR62043876 Chenopodium quinoa HOM05D005817 ORTHO05D007140 1.5e-98 363.6 291 68.0
GSVIVG01023145001 Vitis vinifera HOM05D005817 ORTHO05D007140 4.2e-98 362.1 258 74.4
BcaC06g31224 Brassica carinata HOM05D005817 ORTHO05D007140 2.1e-97 359.8 299 66.2
ECA236G3641 Erigeron canadensis HOM05D000284 ORTHO05D000805 2.1e-97 359.8 299 64.2
C07p33290 Brassica napus HOM05D005817 ORTHO05D007140 6.1e-97 358.2 298 65.8
BolC7t43840H Brassica oleracea HOM05D005817 ORTHO05D007140 6.1e-97 358.2 298 65.8
ClCG11G000310 Citrullus lanatus HOM05D005817 ORTHO05D007140 1.0e-96 357.5 315 66.7
A06p43560 Brassica napus HOM05D005817 ORTHO05D007140 2.3e-96 356.3 300 66.0
Peaxi162Scf00011g01920 Petunia axillaris HOM05D005817 ORTHO05D007140 6.8e-96 354.8 342 58.5
Dinv29679 Davidia involucrata HOM05D005817 ORTHO05D007140 3.7e-94 349.0 258 72.1
Glyma.17G001900 Glycine max HOM05D005817 ORTHO05D007140 8.3e-94 347.8 258 70.9
Mapoly0107s0026 Marchantia polymorpha HOM05D005817 ORTHO05D007140 1.4e-93 347.1 304 61.2
BcaC03g17157 Brassica carinata HOM05D005817 ORTHO05D007140 1.8e-93 346.7 304 62.8
BraA06t27241Z Brassica rapa HOM05D005817 ORTHO05D007140 3.1e-93 345.9 326 61.0
FAN04G1604 Fragaria x ananassa HOM05D005817 ORTHO05D007140 7.0e-93 344.7 372 54.0
Hund15375 Selenicereus undatus HOM05D005817 ORTHO05D007140 7.0e-93 344.7 270 68.5
Manes.10G106400 Manihot esculenta HOM05D005817 ORTHO05D007140 3.5e-92 342.4 263 70.7
Manes.07G030600 Manihot esculenta HOM05D005817 ORTHO05D007140 1.5e-90 337.0 259 71.0
Aa31LG2G7570 Aethionema arabicum HOM05D005817 ORTHO05D007140 1.9e-90 336.7 332 58.1
Aqoxy385s001 Aquilegia oxysepala HOM05D005817 ORTHO05D007140 6.1e-89 331.6 305 63.0
unitig_22.g6849 Utricularia gibba HOM05D005817 ORTHO05D007140 6.1e-89 331.6 335 57.0
Lj5C284T7 Lonicera japonica HOM05D005817 ORTHO05D007140 8.0e-89 331.3 204 80.9
VMungo1215G1434 Vigna mungo HOM05D005817 ORTHO05D007140 8.0e-89 331.3 213 78.9
C02p50820 Brassica napus HOM05D005817 ORTHO05D007140 6.8e-88 328.2 298 62.1
Potri.004G229200 Populus trichocarpa HOM05D005817 ORTHO05D007140 8.9e-88 327.8 259 69.1
BolC2t11164H Brassica oleracea HOM05D005817 ORTHO05D007140 9.8e-87 324.3 301 61.1
Actinidia26194 Actinidia chinensis HOM05D005817 ORTHO05D007140 1.3e-86 323.9 308 62.3
Sc03g0006230 Simmondsia chinensis HOM05D005817 ORTHO05D007140 3.7e-86 322.4 205 77.6
AagrBONN_evm.TU.Sc2ySwM_117.207 Anthoceros agrestis HOM05D005817 ORTHO05D007140 5.4e-85 318.5 298 57.7
AUR62032450 Chenopodium quinoa HOM05D005817 ORTHO05D007140 2.7e-84 316.2 293 60.8
Pp3c10_3580 Physcomitrium patens HOM05D005817 ORTHO05D007140 7.8e-84 314.7 328 54.3
SHI04993 Sapria himalayana HOM05D005817 ORTHO05D007140 7.8e-84 314.7 325 56.3
FAN08G2336 Fragaria x ananassa HOM05D005817 ORTHO05D007140 1.3e-83 313.9 377 50.1
Sopen01g045430 Solanum pennellii HOM05D005817 ORTHO05D007140 1.3e-83 313.9 234 69.7
AL5G11840 Arabidopsis lyrata HOM05D005817 ORTHO05D007140 3.9e-83 312.4 260 63.5
Os08g0109900 Oryza sativa ssp. japonica HOM05D005817 ORTHO05D007140 8.6e-83 311.2 255 64.3
CDE04G1950 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 1.9e-82 310.1 255 66.7
CDE02G1227 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 6.2e-81 305.1 303 58.1
Nitab4.5_0003247g0070 Nicotiana tabacum HOM05D005817 ORTHO05D007140 6.8e-80 301.6 247 66.8
Hma1.2p1_0052F.1_g030010 Hydrangea macrophylla HOM05D005817 ORTHO05D007140 8.3e-78 294.7 186 81.7
HPP92_002041 Vanilla planifolia HOM05D005817 ORTHO05D007140 5.4e-77 292.0 258 61.2
Duzib235G1547 Durio zibethinus HOM05D005817 ORTHO05D007140 2.0e-76 290.0 252 65.5
A02p33050 Brassica napus HOM05D005817 ORTHO05D007140 1.7e-75 287.0 256 62.9
Pp3c14_9240 Physcomitrium patens HOM05D005817 ORTHO05D007140 5.6e-74 282.0 292 55.5
Pp3c10_3582 Physcomitrium patens HOM05D005817 ORTHO05D007140 4.0e-72 275.8 228 63.2
SMO117G0163 Selaginella moellendorffii HOM05D005817 ORTHO05D007140 2.6e-71 273.1 204 68.1
Cpa.g.sc173.14 Carica papaya HOM05D005817 ORTHO05D007140 5.8e-71 271.9 248 62.9
CBR_g40810 Chara braunii HOM05D005817 ORTHO05D007140 5.8e-71 271.9 352 46.3
Pp3c1_22040 Physcomitrium patens HOM05D005817 ORTHO05D007140 2.2e-70 270.0 283 56.2
BraA02t08326Z Brassica rapa HOM05D005817 ORTHO05D007140 1.9e-69 266.9 274 57.3
Lalb_Chr12g0195861 Lupinus albus HOM05D005817 ORTHO05D007140 1.5e-66 257.3 167 79.6
MSTRG.27880 Avicennia marina HOM05D005817 ORTHO05D007140 5.2e-64 248.8 229 60.7
RcHm_v2.0_Chr5g0068831 Rosa chinensis HOM05D005817 ORTHO05D007140 1.2e-60 237.7 156 80.1
MSTRG.601 Avicennia marina HOM05D005817 ORTHO05D007140 9.0e-56 221.5 206 59.2
Dinv29634 Davidia involucrata HOM05D005817 ORTHO05D007140 2.5e-50 203.4 166 62.0
Zm00001eb174130 Zea mays HOM05D005817 ORTHO05D007140 3.1e-48 196.4 131 79.4
Cre02.g106550 Chlamydomonas reinhardtii HOM05D005817 ORTHO05D007140 1.0e-30 138.3 333 33.6
VMungo0766G0001 Vigna mungo HOM05D005817 ORTHO05D007140 1.6e-28 131.0 121 57.0
MCO12G229 Micromonas commoda HOM05D005817 ORTHO05D007140 3.9e-27 126.3 304 31.9
VMungo1148G0001 Vigna mungo HOM05D005817 ORTHO05D007140 5.1e-19 99.4 68 75.0
SEGI_07435 Sequoiadendron giganteum HOM05D005817 ORTHO05D007140 1.3e-17 94.7 80 60.0
PRCOL_00002712 Prasinoderma coloniale HOM05D005817 ORTHO05D007140 1.1e-16 91.7 336 29.8
Thhalv10005196m.g Eutrema salsugineum HOM05D005817 ORTHO05D007140 1.8e-11 74.3 52 75.0
FvH4_3g40414 Fragaria vesca HOM05D005817 ORTHO05D007140 1.5e-10 71.2 57 61.4
Lalb_Chr12g0195851 Lupinus albus HOM05D005817 ORTHO05D007140 1.1e-08 65.1 52 63.5


User provided reference genes

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