Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1025G001 Amborella trichopoda HOM05D000728 ORTHO05D001586 1.2e-66 256.5 149 100.0
ATR0787G208 Amborella trichopoda HOM05D000728 ORTHO05D001586 3.3e-59 231.9 141 96.5
ATR0736G166 Amborella trichopoda HOM05D000728 ORTHO05D001586 3.2e-54 215.3 141 92.2
MBI10_g30715_MAGBIO Magnolia biondii HOM05D000728 ORTHO05D001586 2.9e-15 85.9 88 55.7
Lj1C73G4 Lonicera japonica HOM05D000728 ORTHO05D001586 4.6e-13 78.6 91 48.4
CiPaw.03G270100 Carya illinoinensis HOM05D000728 ORTHO05D001586 1.0e-12 77.4 85 52.9
CSS0045777 Camellia sinensis var. sinensis HOM05D000728 ORTHO05D001586 1.3e-12 77.0 142 38.7
TAR365G0137 Trochodendron aralioides HOM05D000728 ORTHO05D001586 3.9e-12 75.5 86 50.0
Nn1g02947 Nelumbo nucifera HOM05D000728 ORTHO05D001586 3.3e-11 72.4 94 47.9
Ca_09651_v3 Cicer arietinum L. HOM05D000728 ORTHO05D001586 5.6e-11 71.6 88 44.3
Hma1.2p1_0273F.1_g109260 Hydrangea macrophylla HOM05D000728 ORTHO05D001586 7.4e-11 71.2 143 37.8
TAR633G1057 Trochodendron aralioides HOM05D000728 ORTHO05D001586 1.6e-10 70.1 94 48.9
Sopen06g035170 Solanum pennellii HOM05D000728 ORTHO05D001586 2.1e-10 69.7 84 52.4
ECA247G3020 Erigeron canadensis HOM05D000728 ORTHO05D001586 6.2e-10 68.2 93 41.9
Solyc06g083760.3 Solanum lycopersicum HOM05D000728 ORTHO05D001586 6.2e-10 68.2 84 51.2
CDE08G0750 Ceratophyllum demersum HOM05D000728 ORTHO05D001586 1.1e-09 67.4 83 45.8
Rhsim05G0171700 Rhododendron simsii HOM05D000728 ORTHO05D001586 1.1e-09 67.4 70 50.0
Dinv02909 Davidia involucrata HOM05D000728 ORTHO05D001586 1.8e-09 66.6 55 56.4
Thecc.01G251600 Theobroma cacao HOM05D000728 ORTHO05D001586 1.8e-09 66.6 88 47.7
Lj2A44T78 Lonicera japonica HOM05D000728 ORTHO05D001586 2.4e-09 66.2 55 58.2
MD00G1060700 Malus domestica HOM05D000728 ORTHO05D001586 3.1e-09 65.9 86 44.2
CSS0013114 Camellia sinensis var. sinensis HOM05D000728 ORTHO05D001586 4.0e-09 65.5 53 54.7
CSS0020820 Camellia sinensis var. sinensis HOM05D000728 ORTHO05D001586 4.0e-09 65.5 53 54.7
arahy.Tifrunner.gnm1.ann1.68RZIY Arachis hypogaea HOM05D000728 ORTHO05D001586 5.3e-09 65.1 85 45.9
arahy.Tifrunner.gnm1.ann1.W86IKX Arachis hypogaea HOM05D000728 ORTHO05D001586 5.3e-09 65.1 85 45.9
Migut.F02037 Erythranthe guttata HOM05D000728 ORTHO05D001586 5.3e-09 65.1 55 54.5
Lalb_Chr06g0170701 Lupinus albus HOM05D000728 ORTHO05D001586 5.3e-09 65.1 91 42.9
Peaxi162Scf01157g00110 Petunia axillaris HOM05D000728 ORTHO05D001586 5.3e-09 65.1 51 60.8
RcHm_v2.0_Chr6g0286831 Rosa chinensis HOM05D000728 ORTHO05D001586 5.3e-09 65.1 91 42.9
TWI12G1257 Tripterygium wilfordii HOM05D000728 ORTHO05D001586 5.3e-09 65.1 92 51.1
PSO675G3487 Papaver somniferum HOM05D000728 ORTHO05D001586 6.9e-09 64.7 92 44.6
MSTRG.12519 Avicennia marina HOM05D000728 ORTHO05D001586 9.0e-09 64.3 106 43.4
Duzib138G0819 Durio zibethinus HOM05D000728 ORTHO05D001586 9.0e-09 64.3 88 43.2
Manes.12G036100 Manihot esculenta HOM05D000728 ORTHO05D001586 9.0e-09 64.3 91 46.2
Nitab4.5_0002538g0040 Nicotiana tabacum HOM05D000728 ORTHO05D001586 9.0e-09 64.3 95 46.3
Psat6g062880 Pisum sativum HOM05D000728 ORTHO05D001586 9.0e-09 64.3 92 41.3
Rhsim13G0039700 Rhododendron simsii HOM05D000728 ORTHO05D001586 9.0e-09 64.3 52 59.6
TWI18G0707 Tripterygium wilfordii HOM05D000728 ORTHO05D001586 9.0e-09 64.3 92 46.7
CAN.G1487.2 Capsicum annuum HOM05D000728 ORTHO05D001586 1.2e-08 63.9 91 46.2
ECA236G2323 Erigeron canadensis HOM05D000728 ORTHO05D001586 1.2e-08 63.9 62 48.4
EL10Ac7g17673 Beta vulgaris HOM05D000728 ORTHO05D001586 1.5e-08 63.5 94 40.4
Ca_08736_v3 Cicer arietinum L. HOM05D000728 ORTHO05D001586 1.5e-08 63.5 126 39.7
Lj2C1143T10 Lonicera japonica HOM05D000728 ORTHO05D001586 1.5e-08 63.5 95 44.2
Lj1g0018773 Lotus japonicus HOM05D000728 ORTHO05D001586 1.5e-08 63.5 93 44.1
PSO017G6872 Papaver somniferum HOM05D000728 ORTHO05D001586 1.5e-08 63.5 88 46.6
PSO063G6429 Papaver somniferum HOM05D000728 ORTHO05D001586 1.5e-08 63.5 88 46.6
Rhsim01G0261000 Rhododendron simsii HOM05D000728 ORTHO05D001586 1.5e-08 63.5 61 50.8
Haze_24694 Corylus avellana HOM05D000728 ORTHO05D001586 2.0e-08 63.2 83 45.8
Migut.N02227 Erythranthe guttata HOM05D000728 ORTHO05D001586 2.0e-08 63.2 151 34.4
FvH4_2g20650 Fragaria vesca HOM05D000728 ORTHO05D001586 2.0e-08 63.2 91 41.8
FAN20G2690 Fragaria x ananassa HOM05D000728 ORTHO05D001586 2.0e-08 63.2 91 41.8
FAN24G0471 Fragaria x ananassa HOM05D000728 ORTHO05D001586 2.0e-08 63.2 91 41.8
FAN27G1521 Fragaria x ananassa HOM05D000728 ORTHO05D001586 2.0e-08 63.2 91 41.8
Glyma.10G165500 Glycine max HOM05D000728 ORTHO05D001586 2.0e-08 63.2 56 55.4
Lalb_Chr20g0113661 Lupinus albus HOM05D000728 ORTHO05D001586 2.0e-08 63.2 91 44.0
Gohir.D08G209900 Gossypium hirsutum HOM05D000728 ORTHO05D001586 2.6e-08 62.8 91 46.2
VMungo1383G1125 Vigna mungo HOM05D000728 ORTHO05D001586 2.6e-08 62.8 91 45.1
Dinv27107 Davidia involucrata HOM05D000728 ORTHO05D001586 3.4e-08 62.4 85 47.1
Eucgr.K01433 Eucalyptus grandis HOM05D000728 ORTHO05D001586 3.4e-08 62.4 88 46.6
Gorai.004G222200 Gossypium raimondii HOM05D000728 ORTHO05D001586 3.4e-08 62.4 92 45.7
Nitab4.5_0009671g0030 Nicotiana tabacum HOM05D000728 ORTHO05D001586 3.4e-08 62.4 51 60.8
Phvul.001G164300 Phaseolus vulgaris HOM05D000728 ORTHO05D001586 3.4e-08 62.4 92 48.9
Psat6g143800 Pisum sativum HOM05D000728 ORTHO05D001586 3.4e-08 62.4 97 39.2
CSS0031500 Camellia sinensis var. sinensis HOM05D000728 ORTHO05D001586 4.5e-08 62.0 87 46.0
CsaV3_6G007420 Cucumis sativus L. HOM05D000728 ORTHO05D001586 4.5e-08 62.0 88 44.3
Cc01_g17860 Coffea canephora HOM05D000728 ORTHO05D001586 5.8e-08 61.6 83 41.0
DCAR_012580 Daucus carota HOM05D000728 ORTHO05D001586 5.8e-08 61.6 88 43.2
ECA238G1878 Erigeron canadensis HOM05D000728 ORTHO05D001586 5.8e-08 61.6 58 53.4
Nitab4.5_0003342g0010 Nicotiana tabacum HOM05D000728 ORTHO05D001586 5.8e-08 61.6 93 45.2
Actinidia09520 Actinidia chinensis HOM05D000728 ORTHO05D001586 7.6e-08 61.2 155 34.2
Ciclev10018896m.g Citrus clementina HOM05D000728 ORTHO05D001586 7.6e-08 61.2 137 35.8
Migut.D00470 Erythranthe guttata HOM05D000728 ORTHO05D001586 7.6e-08 61.2 100 39.0
Glyma.19G167900 Glycine max HOM05D000728 ORTHO05D001586 7.6e-08 61.2 91 45.1
Sed0009313 Sechium edule HOM05D000728 ORTHO05D001586 7.6e-08 61.2 88 44.3
BraA02t07852Z Brassica rapa HOM05D000728 ORTHO05D001586 9.9e-08 60.8 71 47.9
CAN.G941.29 Capsicum annuum HOM05D000728 ORTHO05D001586 9.9e-08 60.8 57 52.6
Thhalv10003157m.g Eutrema salsugineum HOM05D000728 ORTHO05D001586 9.9e-08 60.8 101 41.6
Gohir.A08G191866 Gossypium hirsutum HOM05D000728 ORTHO05D001586 9.9e-08 60.8 88 42.0
HanXRQChr10g0280661 Helianthus annuus HOM05D000728 ORTHO05D001586 9.9e-08 60.8 102 40.2
Lsat_1_v5_gn_9_11421 Lactuca sativa HOM05D000728 ORTHO05D001586 9.9e-08 60.8 166 34.3
Sc17g0002720 Simmondsia chinensis HOM05D000728 ORTHO05D001586 9.9e-08 60.8 94 38.3
arahy.Tifrunner.gnm1.ann1.6R0DDZ Arachis hypogaea HOM05D000728 ORTHO05D001586 1.3e-07 60.5 42 64.3
MSTRG.9864 Avicennia marina HOM05D000728 ORTHO05D001586 1.3e-07 60.5 52 51.9
BcaC03g16622 Brassica carinata HOM05D000728 ORTHO05D001586 1.3e-07 60.5 72 48.6
C02p44550 Brassica napus HOM05D000728 ORTHO05D001586 1.3e-07 60.5 72 48.6
BolC2t10499H Brassica oleracea HOM05D000728 ORTHO05D001586 1.3e-07 60.5 72 48.6
ClCG06G001460 Citrullus lanatus HOM05D000728 ORTHO05D001586 1.3e-07 60.5 88 43.2
HanXRQChr06g0172551 Helianthus annuus HOM05D000728 ORTHO05D001586 1.3e-07 60.5 42 64.3
Oeu028901.1 Olea europaea HOM05D000728 ORTHO05D001586 1.3e-07 60.5 85 45.9
Sp2g08820 Schrenkiella parvula HOM05D000728 ORTHO05D001586 1.3e-07 60.5 72 50.0
THA.LOC104801129 Tarenaya hassleriana HOM05D000728 ORTHO05D001586 1.3e-07 60.5 91 41.8
vmacro02707 Vaccinium macrocarpon HOM05D000728 ORTHO05D001586 1.3e-07 60.5 91 42.9
Actinidia39990 Actinidia chinensis HOM05D000728 ORTHO05D001586 1.7e-07 60.1 97 41.2
MSTRG.18349 Avicennia marina HOM05D000728 ORTHO05D001586 1.7e-07 60.1 91 42.9
HanXRQChr15g0468241 Helianthus annuus HOM05D000728 ORTHO05D001586 1.7e-07 60.1 104 39.4
SGA_v2.0_scaffold1G00645 Striga asiatica HOM05D000728 ORTHO05D001586 1.7e-07 60.1 108 39.8
MELO3C022387.2 Cucumis melo HOM05D000728 ORTHO05D001586 2.2e-07 59.7 88 42.0
FAN15G3455 Fragaria x ananassa HOM05D000728 ORTHO05D001586 2.2e-07 59.7 96 40.6
Manes.13G040300 Manihot esculenta HOM05D000728 ORTHO05D001586 2.2e-07 59.7 90 43.3
Nn3g19763 Nelumbo nucifera HOM05D000728 ORTHO05D001586 2.2e-07 59.7 131 35.9
Nitab4.5_0003167g0090 Nicotiana tabacum HOM05D000728 ORTHO05D001586 2.2e-07 59.7 95 46.3
PSO151G0231 Papaver somniferum HOM05D000728 ORTHO05D001586 2.2e-07 59.7 55 47.3
BcaB07g30548 Brassica carinata HOM05D000728 ORTHO05D001586 2.9e-07 59.3 58 51.7
Hma1.2p1_3058F.1_g332170 Hydrangea macrophylla HOM05D000728 ORTHO05D001586 2.9e-07 59.3 97 38.1
MD04G1231900 Malus domestica HOM05D000728 ORTHO05D001586 2.9e-07 59.3 53 50.9
Nitab4.5_0000845g0130 Nicotiana tabacum HOM05D000728 ORTHO05D001586 2.9e-07 59.3 94 43.6
Peaxi162Scf00043g02925 Petunia axillaris HOM05D000728 ORTHO05D001586 2.9e-07 59.3 90 44.4
Potri.002G257400 Populus trichocarpa HOM05D000728 ORTHO05D001586 2.9e-07 59.3 81 46.9
PGR004G1360 Punica granatum HOM05D000728 ORTHO05D001586 2.9e-07 59.3 56 51.8
SHI26767 Sapria himalayana HOM05D000728 ORTHO05D001586 2.9e-07 59.3 65 50.8
Hund05480 Selenicereus undatus HOM05D000728 ORTHO05D001586 2.9e-07 59.3 96 35.4
BcaC06g34606 Brassica carinata HOM05D000728 ORTHO05D001586 3.8e-07 58.9 94 40.4
BolC7t43183H Brassica oleracea HOM05D000728 ORTHO05D001586 3.8e-07 58.9 94 40.4
AUR62008788 Chenopodium quinoa HOM05D000728 ORTHO05D001586 3.8e-07 58.9 93 41.9
AUR62025455 Chenopodium quinoa HOM05D000728 ORTHO05D001586 3.8e-07 58.9 93 41.9
DCAR_024288 Daucus carota HOM05D000728 ORTHO05D001586 3.8e-07 58.9 57 54.4
HanXRQChr14g0451361 Helianthus annuus HOM05D000728 ORTHO05D001586 3.8e-07 58.9 48 54.2
Medtr1g069570 Medicago truncatula HOM05D000728 ORTHO05D001586 3.8e-07 58.9 93 40.9
Nitab4.5_0000326g0290 Nicotiana tabacum HOM05D000728 ORTHO05D001586 3.8e-07 58.9 51 58.8
PSO339G3977 Papaver somniferum HOM05D000728 ORTHO05D001586 3.8e-07 58.9 56 44.6
PSO356G0053 Papaver somniferum HOM05D000728 ORTHO05D001586 3.8e-07 58.9 81 45.7
Hund18282 Selenicereus undatus HOM05D000728 ORTHO05D001586 3.8e-07 58.9 93 38.7
Sopen09g028690 Solanum pennellii HOM05D000728 ORTHO05D001586 3.8e-07 58.9 95 42.1
PGSC0003DMG400014693 Solanum tuberosum HOM05D000728 ORTHO05D001586 3.8e-07 58.9 99 38.4
Atru.chr5.1823 Acer truncatum HOM05D000728 ORTHO05D001586 4.9e-07 58.5 155 37.4
Aa31LG5G3280 Aethionema arabicum HOM05D000728 ORTHO05D001586 4.9e-07 58.5 63 50.8
A06p47570 Brassica napus HOM05D000728 ORTHO05D001586 4.9e-07 58.5 72 47.2
C07p26560 Brassica napus HOM05D000728 ORTHO05D001586 4.9e-07 58.5 94 39.4
CAN.G771.39 Capsicum annuum HOM05D000728 ORTHO05D001586 4.9e-07 58.5 88 40.9
Duzib211G0287 Durio zibethinus HOM05D000728 ORTHO05D001586 4.9e-07 58.5 88 43.2
Peaxi162Scf00517g00031 Petunia axillaris HOM05D000728 ORTHO05D001586 4.9e-07 58.5 88 45.5
Prupe.8G216300 Prunus persica HOM05D000728 ORTHO05D001586 4.9e-07 58.5 79 43.0
Solyc09g072890.2 Solanum lycopersicum HOM05D000728 ORTHO05D001586 4.9e-07 58.5 95 42.1
Sopen09g028710 Solanum pennellii HOM05D000728 ORTHO05D001586 4.9e-07 58.5 95 42.1
Glyma.03G166800 Glycine max HOM05D000728 ORTHO05D001586 6.4e-07 58.2 84 44.0
Medtr7g098390 Medicago truncatula HOM05D000728 ORTHO05D001586 6.4e-07 58.2 78 44.9
Sopen06g002990 Solanum pennellii HOM05D000728 ORTHO05D001586 6.4e-07 58.2 85 45.9
Gohir.D11G139300 Gossypium hirsutum HOM05D000728 ORTHO05D001586 8.4e-07 57.8 90 43.3
Gorai.007G149600 Gossypium raimondii HOM05D000728 ORTHO05D001586 8.4e-07 57.8 90 43.3
Solyc06g008130.4 Solanum lycopersicum HOM05D000728 ORTHO05D001586 8.4e-07 57.8 85 44.7
Ah.08g218230 Amaranthus hybridus HOM05D000728 ORTHO05D001586 1.1e-06 57.4 91 37.4
AL8G16110 Arabidopsis lyrata HOM05D000728 ORTHO05D001586 1.1e-06 57.4 73 43.8
BraA06t27625Z Brassica rapa HOM05D000728 ORTHO05D001586 1.1e-06 57.4 72 45.8
AUR62000625 Chenopodium quinoa HOM05D000728 ORTHO05D001586 1.1e-06 57.4 61 49.2
Lalb_Chr02g0149031 Lupinus albus HOM05D000728 ORTHO05D001586 1.1e-06 57.4 65 46.2
Sed0005606 Sechium edule HOM05D000728 ORTHO05D001586 1.1e-06 57.4 89 43.8
arahy.Tifrunner.gnm1.ann1.ZB9HG3 Arachis hypogaea HOM05D000728 ORTHO05D001586 1.4e-06 57.0 59 52.5
Ca_10022_v3 Cicer arietinum L. HOM05D000728 ORTHO05D001586 1.4e-06 57.0 93 41.9
Ca_29586_v3 Cicer arietinum L. HOM05D000728 ORTHO05D001586 1.4e-06 57.0 93 41.9
Cc01_g17870 Coffea canephora HOM05D000728 ORTHO05D001586 1.4e-06 57.0 87 40.2
unitig_60.g25730 Utricularia gibba HOM05D000728 ORTHO05D001586 1.4e-06 57.0 48 54.2
Carub.0008s0456 Capsella rubella HOM05D000728 ORTHO05D001586 1.9e-06 56.6 78 42.3
CDE05G1865 Ceratophyllum demersum HOM05D000728 ORTHO05D001586 1.9e-06 56.6 95 38.9
GSVIVG01028411001 Vitis vinifera HOM05D000728 ORTHO05D001586 1.9e-06 56.6 101 35.6
A02p28170 Brassica napus HOM05D000728 ORTHO05D001586 2.4e-06 56.2 104 42.3
CSS0025855 Camellia sinensis var. sinensis HOM05D000728 ORTHO05D001586 2.4e-06 56.2 88 40.9
CSS0035527 Camellia sinensis var. sinensis HOM05D000728 ORTHO05D001586 2.4e-06 56.2 82 45.1
Oeu039654.1 Olea europaea HOM05D000728 ORTHO05D001586 2.4e-06 56.2 80 42.5
AT5G43990 Arabidopsis thaliana HOM05D000728 ORTHO05D001586 3.2e-06 55.8 73 42.5
ClCG11G010430 Citrullus lanatus HOM05D000728 ORTHO05D001586 3.2e-06 55.8 52 50.0
SGA_v2.0_scaffold62G21458 Striga asiatica HOM05D000728 ORTHO05D001586 3.2e-06 55.8 97 42.3
TPR.G5674 Trifolium pratense HOM05D000728 ORTHO05D001586 3.2e-06 55.8 95 40.0
CANSAT54G0731 Cannabis sativa HOM05D000728 ORTHO05D001586 4.2e-06 55.5 105 36.2
PSO832G2412 Papaver somniferum HOM05D000728 ORTHO05D001586 4.2e-06 55.5 57 50.9
Aa31LG5G14850 Aethionema arabicum HOM05D000728 ORTHO05D001586 5.5e-06 55.1 48 52.1
Cc09_g02870 Coffea canephora HOM05D000728 ORTHO05D001586 5.5e-06 55.1 95 40.0
Oeu002294.1 Olea europaea HOM05D000728 ORTHO05D001586 5.5e-06 55.1 69 44.9
Prupe.6G351300 Prunus persica HOM05D000728 ORTHO05D001586 5.5e-06 55.1 99 39.4
SEGI_37824 Sequoiadendron giganteum HOM05D000728 ORTHO05D001586 5.5e-06 55.1 51 51.0
BcaC06g31665 Brassica carinata HOM05D000728 ORTHO05D001586 7.1e-06 54.7 46 56.5
Cfa006374 Carpinus fangiana HOM05D000728 ORTHO05D001586 7.1e-06 54.7 55 45.5
CsaV3_2G009930 Cucumis sativus L. HOM05D000728 ORTHO05D001586 7.1e-06 54.7 60 43.3
Hma1.2p1_1336F.1_g276470 Hydrangea macrophylla HOM05D000728 ORTHO05D001586 7.1e-06 54.7 97 36.1
Lsat_1_v5_gn_9_91680 Lactuca sativa HOM05D001780 ORTHO05D005322 7.1e-06 54.7 48 52.1
Manes.08G140400 Manihot esculenta HOM05D000728 ORTHO05D001586 7.1e-06 54.7 56 51.8
CSS0037082 Camellia sinensis var. sinensis HOM05D000728 ORTHO05D001586 9.3e-06 54.3 82 43.9
PGR044G1458 Punica granatum HOM05D000728 ORTHO05D001586 9.3e-06 54.3 144 30.6
SGA_v2.0_scaffold92G28291 Striga asiatica HOM05D000728 ORTHO05D001586 9.3e-06 54.3 73 39.7


User provided reference genes

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