Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0820G296 Amborella trichopoda HOM05D005598 ORTHO05D006587 1.8e-173 612.5 300 100.0
Rhsim09G0141700 Rhododendron simsii HOM05D005598 ORTHO05D006587 1.5e-143 513.1 290 84.1
TAR636G1340 Trochodendron aralioides HOM05D005598 ORTHO05D006587 6.8e-141 504.2 290 82.4
CSS0000091 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 2.2e-139 499.2 290 81.7
Nn6g34854 Nelumbo nucifera HOM05D005598 ORTHO05D006587 3.2e-138 495.4 298 79.5
MD02G1261600 Malus domestica HOM05D005598 ORTHO05D006587 7.1e-138 494.2 299 79.9
QL04p046731 Quercus lobata HOM05D005598 ORTHO05D006587 1.6e-137 493.0 299 79.3
CDE08G1414 Ceratophyllum demersum HOM05D005598 ORTHO05D006587 7.8e-137 490.7 298 78.2
CiPaw.13G040600 Carya illinoinensis HOM05D005598 ORTHO05D006587 1.0e-136 490.3 290 79.3
Haze_03295 Corylus avellana HOM05D005598 ORTHO05D006587 1.7e-136 489.6 301 78.7
Lj2C33T4 Lonicera japonica HOM05D005598 ORTHO05D006587 3.0e-136 488.8 290 81.0
Sed0022725 Sechium edule HOM05D005598 ORTHO05D006587 1.9e-135 486.1 290 79.0
CsaV3_4G003460 Cucumis sativus L. HOM05D005598 ORTHO05D006587 2.1e-134 482.6 296 77.7
Sc09g0005330 Simmondsia chinensis HOM05D005598 ORTHO05D006587 2.8e-134 482.3 293 78.8
GSVIVG01010722001 Vitis vinifera HOM05D005598 ORTHO05D006587 3.6e-134 481.9 298 77.9
Cc02_g09610 Coffea canephora HOM05D005598 ORTHO05D006587 6.2e-134 481.1 295 78.6
RcHm_v2.0_Chr5g0049931 Rosa chinensis HOM05D005598 ORTHO05D006587 1.1e-133 480.3 298 78.5
Peaxi162Scf00173g00110 Petunia axillaris HOM05D005598 ORTHO05D006587 1.5e-132 476.5 295 78.6
MELO3C017716.2 Cucumis melo HOM05D005598 ORTHO05D006587 2.6e-132 475.7 296 76.7
PGR142G4231 Punica granatum HOM05D005598 ORTHO05D006587 2.6e-132 475.7 294 77.9
Atru.chr12.1043 Acer truncatum HOM05D005598 ORTHO05D006587 4.4e-132 474.9 299 76.9
Eucgr.G02689 Eucalyptus grandis HOM05D005598 ORTHO05D006587 4.4e-132 474.9 295 77.6
Aqoxy4G02744 Aquilegia oxysepala HOM05D005598 ORTHO05D006587 7.6e-132 474.2 300 76.3
Hund06785 Selenicereus undatus HOM05D005598 ORTHO05D006587 7.6e-132 474.2 296 76.7
PSO339G6152 Papaver somniferum HOM05D005598 ORTHO05D006587 9.9e-132 473.8 285 79.6
TWI38G0756 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 9.9e-132 473.8 290 78.6
vmacro10312 Vaccinium macrocarpon HOM05D005598 ORTHO05D006587 9.9e-132 473.8 290 78.3
Gohir.D05G288900 Gossypium hirsutum HOM05D005598 ORTHO05D006587 1.3e-131 473.4 291 78.4
Nitab4.5_0003590g0030 Nicotiana tabacum HOM05D005598 ORTHO05D006587 2.2e-131 472.6 295 77.6
FAN11G2626 Fragaria x ananassa HOM05D005598 ORTHO05D006587 6.4e-131 471.1 298 77.2
Ciclev10016103m.g Citrus clementina HOM05D005598 ORTHO05D006587 8.4e-131 470.7 295 75.3
Duzib128G1802 Durio zibethinus HOM05D005598 ORTHO05D006587 8.4e-131 470.7 295 76.6
Gohir.A05G287700 Gossypium hirsutum HOM05D005598 ORTHO05D006587 1.1e-130 470.3 291 77.7
DCAR_006354 Daucus carota HOM05D005598 ORTHO05D006587 1.4e-130 469.9 290 77.2
Gorai.009G304000 Gossypium raimondii HOM05D005598 ORTHO05D006587 1.4e-130 469.9 299 76.9
Potri.008G019800 Populus trichocarpa HOM05D005598 ORTHO05D006587 1.9e-130 469.5 290 76.9
Sopen11g002760 Solanum pennellii HOM05D005598 ORTHO05D006587 2.4e-130 469.2 295 77.3
ClCG07G015650 Citrullus lanatus HOM05D005598 ORTHO05D006587 3.2e-130 468.8 327 70.0
FvH4_3g27560 Fragaria vesca HOM05D005598 ORTHO05D006587 3.2e-130 468.8 298 76.5
MSTRG.23901 Avicennia marina HOM05D005598 ORTHO05D006587 4.2e-130 468.4 290 77.2
Solyc11g006860.2 Solanum lycopersicum HOM05D005598 ORTHO05D006587 5.4e-130 468.0 295 77.3
HPP92_000055 Vanilla planifolia HOM05D005598 ORTHO05D006587 5.4e-130 468.0 300 75.7
EL10Ac4g08688 Beta vulgaris HOM05D005598 ORTHO05D006587 7.1e-130 467.6 296 75.7
arahy.Tifrunner.gnm1.ann1.8DLZ0X Arachis hypogaea HOM05D005598 ORTHO05D006587 1.6e-129 466.5 298 75.8
HanXRQChr11g0342091 Helianthus annuus HOM05D005598 ORTHO05D006587 1.6e-129 466.5 298 75.8
Lsat_1_v5_gn_2_104400 Lactuca sativa HOM05D005598 ORTHO05D006587 1.6e-129 466.5 291 75.9
AUR62042081 Chenopodium quinoa HOM05D005598 ORTHO05D006587 2.7e-129 465.7 294 75.2
arahy.Tifrunner.gnm1.ann1.L8YGTT Arachis hypogaea HOM05D005598 ORTHO05D006587 3.5e-129 465.3 299 76.3
CAN.G645.19 Capsicum annuum HOM05D005598 ORTHO05D006587 3.5e-129 465.3 296 77.4
Sabra08G0013100 Salix brachista HOM05D005598 ORTHO05D006587 1.3e-128 463.4 296 75.3
PGSC0003DMG400023970 Solanum tuberosum HOM05D005598 ORTHO05D006587 1.3e-128 463.4 295 76.6
Thecc.10G109100 Theobroma cacao HOM05D005598 ORTHO05D006587 1.3e-128 463.4 299 75.6
Migut.F01603 Erythranthe guttata HOM05D005598 ORTHO05D006587 1.7e-128 463.0 298 74.5
THA.LOC104824207 Tarenaya hassleriana HOM05D005598 ORTHO05D006587 3.0e-128 462.2 300 75.3
VMungo0720G0111 Vigna mungo HOM05D005598 ORTHO05D006587 5.1e-128 461.5 292 75.3
Lj5g0018811 Lotus japonicus HOM05D005598 ORTHO05D006587 3.3e-127 458.8 290 75.9
Ca_25662_v3 Cicer arietinum L. HOM05D005598 ORTHO05D006587 4.3e-127 458.4 289 75.8
ECA238G1649 Erigeron canadensis HOM05D005598 ORTHO05D006587 7.3e-127 457.6 299 74.9
Medtr1g111980 Medicago truncatula HOM05D005598 ORTHO05D006587 7.3e-127 457.6 298 73.5
SalBow6G5745 Salvia bowleyana HOM05D005598 ORTHO05D006587 9.6e-127 457.2 301 75.1
TPR.G2473 Trifolium pratense HOM05D005598 ORTHO05D006587 1.3e-126 456.8 298 74.2
FAN16G3025 Fragaria x ananassa HOM05D005598 ORTHO05D006587 1.6e-126 456.4 298 75.5
Phvul.007G022800 Phaseolus vulgaris HOM05D005598 ORTHO05D006587 3.6e-126 455.3 293 74.4
Oeu024809.1 Olea europaea HOM05D005598 ORTHO05D006587 1.4e-125 453.4 323 68.7
Lalb_Chr02g0146251 Lupinus albus HOM05D005598 ORTHO05D006587 5.3e-125 451.4 290 75.5
CANSAT56G2222 Cannabis sativa HOM05D005598 ORTHO05D006587 2.6e-124 449.1 295 72.9
Nitab4.5_0002586g0090 Nicotiana tabacum HOM05D005598 ORTHO05D006587 8.4e-123 444.1 330 68.5
BraA04t17544Z Brassica rapa HOM05D005598 ORTHO05D006587 5.5e-122 441.4 292 71.9
Os11g0153900 Oryza sativa ssp. japonica HOM05D005598 ORTHO05D006587 5.5e-122 441.4 293 71.7
Manes.10G062100 Manihot esculenta HOM05D005598 ORTHO05D006587 7.1e-122 441.0 281 76.9
BcaC02g08374 Brassica carinata HOM05D005598 ORTHO05D006587 9.3e-122 440.7 292 71.6
A04p19500 Brassica napus HOM05D005598 ORTHO05D006587 9.3e-122 440.7 292 71.6
C04p55060 Brassica napus HOM05D005598 ORTHO05D006587 9.3e-122 440.7 292 71.6
BolC4t27046H Brassica oleracea HOM05D005598 ORTHO05D006587 9.3e-122 440.7 292 71.6
Sp4g04110 Schrenkiella parvula HOM05D005598 ORTHO05D006587 1.6e-121 439.9 290 72.4
COL.COLO4_38547 Corchorus olitorius HOM05D005598 ORTHO05D006587 2.1e-121 439.5 275 76.7
Dinv11826 Davidia involucrata HOM05D005598 ORTHO05D006587 2.1e-121 439.5 267 80.9
BcaB06g28035 Brassica carinata HOM05D005598 ORTHO05D006587 2.7e-121 439.1 292 71.6
CSS0039611 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 2.3e-120 436.0 303 71.0
CARHR116600 Cardamine hirsuta HOM05D005598 ORTHO05D006587 1.1e-119 433.7 290 71.0
Carub.0004s0468 Capsella rubella HOM05D005598 ORTHO05D006587 1.5e-119 433.3 290 70.7
TWI63G1098 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 1.5e-119 433.3 290 74.1
AT2G25100 Arabidopsis thaliana HOM05D005598 ORTHO05D006587 5.6e-119 431.4 290 69.7
Aa31LG7G12150 Aethionema arabicum HOM05D005598 ORTHO05D006587 2.1e-118 429.5 290 71.0
Actinidia34728 Actinidia chinensis HOM05D005598 ORTHO05D006587 2.4e-117 426.0 241 83.0
SEGI_12354 Sequoiadendron giganteum HOM05D005598 ORTHO05D006587 2.4e-117 426.0 288 70.8
SGA_v2.0_scaffold62G21319 Striga asiatica HOM05D005598 ORTHO05D006587 2.0e-116 422.9 279 74.2
Dinv10930 Davidia involucrata HOM05D005598 ORTHO05D006587 2.6e-116 422.5 237 84.8
Glyma.10G278500 Glycine max HOM05D005598 ORTHO05D006587 5.1e-112 408.3 269 74.0
Prupe.2G069600 Prunus persica HOM05D005598 ORTHO05D006587 5.1e-112 408.3 235 82.6
MBI01_g02157_MAGBIO Magnolia biondii HOM05D005598 ORTHO05D006587 1.5e-111 406.8 247 81.0
unitig_736.g22318 Utricularia gibba HOM05D005598 ORTHO05D006587 7.4e-111 404.4 287 69.7
Zm00001eb406890 Zea mays HOM05D005598 ORTHO05D006587 6.3e-110 401.4 269 71.7
Thhalv10000575m.g Eutrema salsugineum HOM05D005598 ORTHO05D006587 3.1e-109 399.1 290 66.6
PSO801G0206 Papaver somniferum HOM05D005598 ORTHO05D006587 2.0e-108 396.4 230 81.3
Cpa.g.c34135 Carica papaya HOM05D005598 ORTHO05D006587 9.7e-103 377.5 222 79.3
Mapoly0006s0052 Marchantia polymorpha HOM05D005598 ORTHO05D006587 1.8e-93 346.7 295 59.3
Psat0s4121g0080 Pisum sativum HOM05D005598 ORTHO05D006587 1.3e-91 340.5 236 70.8
Pp3c13_7860 Physcomitrium patens HOM05D005598 ORTHO05D006587 1.7e-91 340.1 294 58.8
AagrBONN_evm.TU.Sc2ySwM_362.477 Anthoceros agrestis HOM05D005598 ORTHO05D006587 3.8e-91 339.0 287 57.8
DCAR_006363 Daucus carota HOM05D005598 ORTHO05D006587 1.3e-83 313.9 281 61.6
AUR62041514 Chenopodium quinoa HOM05D005598 ORTHO05D006587 1.9e-82 310.1 407 44.5
AL4G16260 Arabidopsis lyrata HOM05D005598 ORTHO05D006587 8.2e-78 294.7 207 68.1
SMO347G0320 Selaginella moellendorffii HOM05D005598 ORTHO05D006587 1.6e-68 263.8 231 58.9
CiPaw.14G033400 Carya illinoinensis HOM05D005598 ORTHO05D006587 1.7e-62 243.8 258 56.2
Cre17.g701350 Chlamydomonas reinhardtii HOM05D005598 ORTHO05D006587 7.3e-58 228.4 290 42.1
Lalb_Chr21g0309151 Lupinus albus HOM05D005598 ORTHO05D006587 1.0e-56 224.6 146 76.7
Haze_26455 Corylus avellana HOM05D005598 ORTHO05D006587 1.6e-52 210.7 217 48.4
Ah.04g160180 Amaranthus hybridus HOM05D005598 ORTHO05D006587 1.4e-48 197.6 120 78.3
CBR_g29781 Chara braunii HOM05D005598 ORTHO05D006587 4.0e-48 196.1 204 52.0
Psat4g059000 Pisum sativum HOM05D005598 ORTHO05D006587 9.8e-47 191.4 117 71.8
Glyma.07G162800 Glycine max HOM05D005598 ORTHO05D006587 1.1e-40 171.4 217 47.0
MD02G1261400 Malus domestica HOM05D005598 ORTHO05D006587 5.2e-40 169.1 175 53.1
Cfa026153 Carpinus fangiana HOM05D005598 ORTHO05D006587 7.3e-34 148.7 238 39.9
HanXRQChr05g0158341 Helianthus annuus HOM05D005598 ORTHO05D006587 4.7e-33 146.0 111 64.0
Zm00001eb407010 Zea mays HOM05D005598 ORTHO05D006587 1.5e-26 124.4 81 79.0
Psat0s449g0080 Pisum sativum HOM05D000909 ORTHO05D000928 6.9e-24 115.5 71 77.5
Psat0s1058g0040 Pisum sativum HOM05D005598 ORTHO05D006587 3.3e-18 96.7 52 84.6
Lsat_1_v5_gn_9_94660 Lactuca sativa HOM05D005598 ORTHO05D006587 6.2e-17 92.4 60 73.3
SEGI_12669 Sequoiadendron giganteum HOM05D005598 ORTHO05D006587 5.8e-15 85.9 47 76.6
MBI01_g19134_MAGBIO Magnolia biondii HOM05D005598 ORTHO05D006587 7.6e-15 85.5 55 76.4
Psat5g299440 Pisum sativum HOM05D005598 ORTHO05D006587 4.9e-14 82.8 121 38.0
Psat5g185320 Pisum sativum HOM05D000559 ORTHO05D006587 9.3e-13 78.6 50 72.0
Sabra10G0187600 Salix brachista HOM05D005598 ORTHO05D006587 1.3e-11 74.7 59 59.3
Lalb_Chr21g0309161 Lupinus albus HOM05D005598 ORTHO05D006587 1.1e-10 71.6 58 60.3
Cre13.g561900 Chlamydomonas reinhardtii HOM05D016613 ORTHO05D014817 4.3e-10 69.7 166 34.3
Lalb_Chr21g0309141 Lupinus albus HOM05D005598 ORTHO05D006587 9.6e-10 68.6 45 71.1
Psat4g071240 Pisum sativum HOM05D005598 ORTHO05D006587 1.6e-09 67.8 50 64.0
Pp3c2_19600 Physcomitrium patens HOM05D016613 ORTHO05D014817 5.8e-07 59.3 170 26.5
Actinidia27053 Actinidia chinensis HOM05D005215 ORTHO05D006382 7.6e-07 58.9 44 63.6
Psat6g162040 Pisum sativum HOM05D005598 ORTHO05D006587 7.6e-07 58.9 81 49.4
SMO118G0286 Selaginella moellendorffii HOM05D016613 ORTHO05D014817 3.8e-06 56.6 164 27.4
ClCG05G021840 Citrullus lanatus HOM05D005598 ORTHO05D006587 4.9e-06 56.2 95 40.0
Mapoly0023s0164 Marchantia polymorpha HOM05D016613 ORTHO05D014817 4.9e-06 56.2 158 31.0
Psat7g021760 Pisum sativum HOM05D000559 ORTHO05D000596 4.9e-06 56.2 29 86.2


User provided reference genes

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