Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0796G332 Amborella trichopoda HOM05D005667 ORTHO05D007299 8.0e-227 790.0 383 100.0
TAR627G0762 Trochodendron aralioides HOM05D005667 ORTHO05D007299 3.7e-155 552.0 385 69.1
TAR365G0445 Trochodendron aralioides HOM05D005667 ORTHO05D007299 8.1e-155 550.8 385 69.1
Nn4g25820 Nelumbo nucifera HOM05D005667 ORTHO05D007299 2.1e-150 536.2 387 67.4
Dinv33042 Davidia involucrata HOM05D005667 ORTHO05D007299 3.7e-147 525.4 387 64.3
QL12p027280 Quercus lobata HOM05D005667 ORTHO05D007299 6.5e-144 514.6 372 65.9
Cfa005935 Carpinus fangiana HOM05D005667 ORTHO05D007299 3.2e-143 512.3 387 64.1
Atru.chr5.1169 Acer truncatum HOM05D005667 ORTHO05D007299 9.3e-143 510.8 383 65.5
MD11G1306000 Malus domestica HOM05D005667 ORTHO05D007299 1.2e-142 510.4 385 63.4
Glyma.03G213700 Glycine max HOM05D005667 ORTHO05D007299 3.5e-142 508.8 386 61.7
Lalb_Chr04g0259821 Lupinus albus HOM05D005667 ORTHO05D007299 1.0e-141 507.3 387 63.8
MD03G1286100 Malus domestica HOM05D005667 ORTHO05D007299 1.8e-141 506.5 386 63.5
Glyma.19G210500 Glycine max HOM05D005667 ORTHO05D007299 2.3e-141 506.1 386 62.2
Actinidia32226 Actinidia chinensis HOM05D005667 ORTHO05D007299 6.7e-141 504.6 387 63.0
CANSAT25G0856 Cannabis sativa HOM05D005667 ORTHO05D007299 8.7e-141 504.2 380 62.9
VMungo1383G3519 Vigna mungo HOM05D005667 ORTHO05D007299 1.1e-140 503.8 384 61.7
FvH4_2g25530 Fragaria vesca HOM05D005667 ORTHO05D007299 5.7e-140 501.5 372 64.8
vmacro14998 Vaccinium macrocarpon HOM05D005667 ORTHO05D007299 7.4e-140 501.1 393 62.8
arahy.Tifrunner.gnm1.ann1.P0XQ2X Arachis hypogaea HOM05D005667 ORTHO05D007299 4.8e-139 498.4 389 62.5
Medtr7g108870 Medicago truncatula HOM05D005667 ORTHO05D007299 8.2e-139 497.7 385 61.3
Medtr8g058590 Medicago truncatula HOM05D005667 ORTHO05D007299 8.2e-139 497.7 385 61.3
Aqoxy2G02973 Aquilegia oxysepala HOM05D005667 ORTHO05D007299 1.1e-138 497.3 399 62.4
Sed0014922 Sechium edule HOM05D005667 ORTHO05D007299 1.1e-138 497.3 372 61.8
Phvul.001G206300 Phaseolus vulgaris HOM05D005667 ORTHO05D007299 1.8e-138 496.5 384 61.5
Haze_04910 Corylus avellana HOM05D005667 ORTHO05D007299 4.1e-138 495.4 418 59.1
QL12p026655 Quercus lobata HOM05D005667 ORTHO05D007299 9.0e-138 494.2 372 64.2
MELO3C017966.2 Cucumis melo HOM05D005667 ORTHO05D007299 2.0e-137 493.0 372 61.6
CsaV3_4G000700 Cucumis sativus L. HOM05D005667 ORTHO05D007299 2.0e-137 493.0 390 59.2
arahy.Tifrunner.gnm1.ann1.AQSE8X Arachis hypogaea HOM05D005667 ORTHO05D007299 5.9e-137 491.5 389 61.4
Ca_09151_v3 Cicer arietinum L. HOM05D005667 ORTHO05D007299 5.9e-137 491.5 391 60.4
Lalb_Chr18g0047071 Lupinus albus HOM05D005667 ORTHO05D007299 5.9e-137 491.5 390 61.5
Hma1.2p1_0209F.1_g088490 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 7.7e-137 491.1 387 62.5
Psat3g021960 Pisum sativum HOM05D005667 ORTHO05D007299 1.3e-136 490.3 392 60.5
Hund18138 Selenicereus undatus HOM05D005667 ORTHO05D007299 2.2e-136 489.6 389 62.2
TPR.G9636 Trifolium pratense HOM05D005667 ORTHO05D007299 5.0e-136 488.4 389 60.7
CDE08G0318 Ceratophyllum demersum HOM05D005667 ORTHO05D007299 1.4e-135 486.9 384 62.8
FAN20G0834 Fragaria x ananassa HOM05D005667 ORTHO05D007299 9.4e-135 484.2 390 60.8
TWI59G1070 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 9.4e-135 484.2 389 62.5
Lj1g0013419 Lotus japonicus HOM05D005667 ORTHO05D007299 6.1e-134 481.5 391 59.6
Solyc09g075000.3 Solanum lycopersicum HOM05D005667 ORTHO05D007299 7.9e-134 481.1 386 61.9
DCAR_005798 Daucus carota HOM05D005667 ORTHO05D007299 2.3e-133 479.6 384 61.5
Sopen09g029820 Solanum pennellii HOM05D005667 ORTHO05D007299 2.3e-133 479.6 387 62.3
SGA_v2.0_scaffold2G01401 Striga asiatica HOM05D005667 ORTHO05D007299 2.3e-133 479.6 387 61.2
Cc01_g20730 Coffea canephora HOM05D005667 ORTHO05D007299 3.0e-133 479.2 444 54.3
Sc05g0004030 Simmondsia chinensis HOM05D005667 ORTHO05D007299 3.0e-133 479.2 388 60.3
TWI23G0451 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 3.9e-133 478.8 385 61.8
Ah.08g213150 Amaranthus hybridus HOM05D005667 ORTHO05D007299 5.7e-132 474.9 392 59.4
Nitab4.5_0002469g0040 Nicotiana tabacum HOM05D005667 ORTHO05D007299 9.7e-132 474.2 388 60.3
CiPaw.07G107100 Carya illinoinensis HOM05D005667 ORTHO05D007299 1.3e-131 473.8 387 59.4
Prupe.8G259400 Prunus persica HOM05D005667 ORTHO05D007299 1.3e-131 473.8 343 66.8
PGSC0003DMG400011397 Solanum tuberosum HOM05D005667 ORTHO05D007299 1.7e-131 473.4 386 61.4
Ciclev10020175m.g Citrus clementina HOM05D005667 ORTHO05D007299 4.8e-131 471.9 445 54.2
HanXRQChr04g0118041 Helianthus annuus HOM05D005667 ORTHO05D007299 1.1e-130 470.7 387 59.9
MSTRG.21625 Avicennia marina HOM05D005667 ORTHO05D007299 1.8e-130 469.9 386 60.4
PSO210G4429 Papaver somniferum HOM05D005667 ORTHO05D007299 2.0e-129 466.5 394 59.6
COL.COLO4_23365 Corchorus olitorius HOM05D005667 ORTHO05D007299 1.3e-128 463.8 388 59.5
Migut.D00204 Erythranthe guttata HOM05D005667 ORTHO05D007299 1.3e-128 463.8 390 58.7
PSO170G6061 Papaver somniferum HOM05D005667 ORTHO05D007299 2.9e-128 462.6 394 59.6
Duzib138G1280 Durio zibethinus HOM05D005667 ORTHO05D007299 1.9e-127 459.9 389 58.9
Thecc.01G298400 Theobroma cacao HOM05D005667 ORTHO05D007299 2.5e-127 459.5 388 59.3
CSS0019258 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 7.2e-127 458.0 386 59.1
Eucgr.K03468 Eucalyptus grandis HOM05D005667 ORTHO05D007299 7.2e-127 458.0 373 59.5
Sabra02G0153700 Salix brachista HOM05D005667 ORTHO05D007299 2.1e-126 456.4 408 57.1
THA.LOC104817511 Tarenaya hassleriana HOM05D005667 ORTHO05D007299 3.6e-126 455.7 370 59.5
HPP92_027132 Vanilla planifolia HOM05D005667 ORTHO05D007299 3.6e-126 455.7 370 59.2
SalBow3G0511 Salvia bowleyana HOM05D005667 ORTHO05D007299 1.8e-125 453.4 372 58.3
Potri.002G205600 Populus trichocarpa HOM05D005667 ORTHO05D007299 3.9e-125 452.2 384 59.4
AT2G47790 Arabidopsis thaliana HOM05D005667 ORTHO05D007299 1.1e-124 450.7 391 56.3
Nitab4.5_0005515g0060 Nicotiana tabacum HOM05D005667 ORTHO05D007299 5.7e-124 448.4 388 58.2
AL4G47370 Arabidopsis lyrata HOM05D005667 ORTHO05D007299 7.4e-124 448.0 388 56.4
Carub.0004s3050 Capsella rubella HOM05D005667 ORTHO05D007299 1.7e-123 446.8 385 55.8
GSVIVG01027987001 Vitis vinifera HOM05D005667 ORTHO05D007299 4.8e-123 445.3 338 63.9
Lsat_1_v5_gn_8_53441 Lactuca sativa HOM05D005667 ORTHO05D007299 8.2e-123 444.5 397 57.7
SEGI_23788 Sequoiadendron giganteum HOM05D005667 ORTHO05D007299 1.1e-122 444.1 395 56.7
Sp4g29720 Schrenkiella parvula HOM05D005667 ORTHO05D007299 1.8e-122 443.4 372 57.0
Manes.01G217700 Manihot esculenta HOM05D005667 ORTHO05D007299 4.1e-122 442.2 382 57.9
AUR62008656 Chenopodium quinoa HOM05D005667 ORTHO05D007299 5.3e-122 441.8 388 56.4
AUR62033112 Chenopodium quinoa HOM05D005667 ORTHO05D007299 3.5e-121 439.1 388 55.7
Potri.014G130600 Populus trichocarpa HOM05D005667 ORTHO05D007299 1.3e-120 437.2 382 57.6
Peaxi162Scf00001g00492 Petunia axillaris HOM05D005667 ORTHO05D007299 2.9e-120 436.0 343 62.4
PGR044G1684 Punica granatum HOM05D005667 ORTHO05D007299 4.2e-119 432.2 390 55.6
ClCG10G010830 Citrullus lanatus HOM05D005667 ORTHO05D007299 7.2e-119 431.4 390 54.4
EL10Ac7g17451 Beta vulgaris HOM05D005667 ORTHO05D007299 2.3e-117 426.4 386 56.0
CARHR143160 Cardamine hirsuta HOM05D005667 ORTHO05D007299 6.7e-117 424.9 391 53.7
Lj1C26T7 Lonicera japonica HOM05D005667 ORTHO05D007299 4.4e-116 422.2 312 64.1
Hma1.2p1_0209F.1_g088500 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 8.2e-115 417.9 429 51.3
Aa31LG1G29130 Aethionema arabicum HOM05D005667 ORTHO05D007299 3.1e-114 416.0 394 52.5
Thhalv10001494m.g Eutrema salsugineum HOM05D005667 ORTHO05D007299 3.1e-114 416.0 388 54.1
SHI15190 Sapria himalayana HOM05D005667 ORTHO05D007299 5.3e-114 415.2 386 55.2
CSS0024566 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 1.7e-112 410.2 387 54.3
Actinidia24829 Actinidia chinensis HOM05D005667 ORTHO05D007299 5.0e-112 408.7 387 56.3
CSS0050073 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 8.5e-112 407.9 387 54.3
Sabra14G0097200 Salix brachista HOM05D005667 ORTHO05D007299 1.5e-111 407.1 382 54.5
Rhsim01G0284200 Rhododendron simsii HOM05D005667 ORTHO05D007299 2.7e-110 402.9 398 54.0
Gohir.D12G135100 Gossypium hirsutum HOM05D005667 ORTHO05D007299 1.4e-109 400.6 386 54.1
ECA236G1571 Erigeron canadensis HOM05D005667 ORTHO05D007299 5.2e-109 398.7 341 57.8
unitig_0.g1174 Utricularia gibba HOM05D005667 ORTHO05D007299 7.5e-108 394.8 418 49.8
BcaB06g29498 Brassica carinata HOM05D005667 ORTHO05D007299 4.8e-107 392.1 409 49.6
Gorai.008G146100 Gossypium raimondii HOM05D005667 ORTHO05D007299 4.8e-107 392.1 386 53.9
Gohir.A12G131200 Gossypium hirsutum HOM05D005667 ORTHO05D007299 6.3e-107 391.7 386 53.4
A04p35070 Brassica napus HOM05D005667 ORTHO05D007299 8.3e-107 391.3 385 51.2
BolC4t28779H Brassica oleracea HOM05D005667 ORTHO05D007299 9.1e-106 387.9 387 50.9
BraA04t18943Z Brassica rapa HOM05D005667 ORTHO05D007299 1.2e-105 387.5 386 50.8
C04p72980 Brassica napus HOM05D005667 ORTHO05D007299 2.0e-105 386.7 387 50.4
Sc05g0001380 Simmondsia chinensis HOM05D005667 ORTHO05D007299 1.5e-103 380.6 302 60.3
BcaC02g06992 Brassica carinata HOM05D005667 ORTHO05D007299 5.5e-103 378.6 386 49.5
Dinv19706 Davidia involucrata HOM05D005667 ORTHO05D007299 3.4e-92 342.8 259 64.5
Mapoly0153s0027 Marchantia polymorpha HOM05D005667 ORTHO05D007299 2.9e-91 339.7 386 47.7
SMO329G0065 Selaginella moellendorffii HOM05D005667 ORTHO05D007299 3.7e-91 339.3 348 50.9
Pp3c11_14960 Physcomitrium patens HOM05D005667 ORTHO05D007299 3.2e-90 336.3 388 46.6
Pp3c2_26100 Physcomitrium patens HOM05D005667 ORTHO05D007299 5.4e-90 335.5 387 47.5
Cpa.g.sc9.222 Carica papaya HOM05D005667 ORTHO05D007299 1.3e-88 330.9 275 60.0
Medtr8g058557 Medicago truncatula HOM05D005667 ORTHO05D007299 3.4e-84 316.2 232 65.9
HPP92_021590 Vanilla planifolia HOM05D005667 ORTHO05D007299 1.9e-82 310.5 222 66.7
Pp3c11_15090 Physcomitrium patens HOM05D005667 ORTHO05D007299 4.6e-73 279.3 299 47.8
BcaB06g29495 Brassica carinata HOM05D005667 ORTHO05D007299 1.5e-71 274.2 279 49.1
Zm00001eb157470 Zea mays HOM05D005667 ORTHO05D007299 9.5e-71 271.6 175 72.0
RcHm_v2.0_Chr6g0293741 Rosa chinensis HOM05D005667 ORTHO05D007299 3.1e-69 266.5 201 63.2
AagrBONN_evm.TU.Sc2ySwM_344.2785 Anthoceros agrestis HOM05D005667 ORTHO05D007299 7.1e-66 255.4 233 54.5
Nn3g21456 Nelumbo nucifera HOM05D005667 ORTHO05D007299 2.9e-59 233.4 317 43.5
Os12g0294100 Oryza sativa ssp. japonica HOM05D005667 ORTHO05D007299 7.1e-58 228.8 190 60.5
Oeu011452.2 Olea europaea HOM05D005667 ORTHO05D007299 4.8e-54 216.1 167 63.5
Cre03.g178050 Chlamydomonas reinhardtii HOM05D005667 ORTHO05D007299 4.5e-52 209.5 358 36.3
Actinidia21054 Actinidia chinensis HOM05D005667 ORTHO05D007299 1.5e-44 184.5 154 57.8
PRCOL_00003266 Prasinoderma coloniale HOM05D005667 ORTHO05D007299 9.0e-37 158.7 342 32.2
MCO09G319 Micromonas commoda HOM05D005667 ORTHO05D007299 3.4e-36 156.8 345 31.3
CBR_g34279 Chara braunii HOM05D005667 ORTHO05D007299 6.3e-30 136.0 148 47.3
RcHm_v2.0_Chr6g0293751 Rosa chinensis HOM05D005667 ORTHO05D007299 1.5e-28 131.3 115 57.4
BcaC02g06993 Brassica carinata HOM05D005667 ORTHO05D007299 4.6e-25 119.8 121 52.9
Migut.D00125 Erythranthe guttata HOM05D005667 ORTHO05D007299 6.3e-22 109.4 177 36.7
Migut.G00109 Erythranthe guttata HOM05D005667 ORTHO05D007299 2.0e-15 87.8 171 32.7
CBR_g31107 Chara braunii HOM05D000019 ORTHO05D000048 3.4e-12 77.0 187 28.3
CBR_g31109 Chara braunii HOM05D000019 ORTHO05D000048 5.9e-12 76.3 69 47.8
ECA038G0001 Erigeron canadensis HOM05D004669 ORTHO05D005767 6.7e-08 62.8 214 25.7
Actinidia13473 Actinidia chinensis HOM05D005667 ORTHO05D000474 1.5e-07 61.6 68 47.1
MCO13G313 Micromonas commoda HOM05D004669 ORTHO05D005767 2.6e-07 60.8 136 30.1
SalBow2G0244 Salvia bowleyana HOM05D004669 ORTHO05D005767 3.3e-07 60.5 206 24.3
arahy.Tifrunner.gnm1.ann1.DS860L Arachis hypogaea HOM05D004669 ORTHO05D005767 4.4e-07 60.1 206 24.3
arahy.Tifrunner.gnm1.ann1.L4R828 Arachis hypogaea HOM05D004669 ORTHO05D005767 4.4e-07 60.1 206 24.3
AagrBONN_evm.TU.Sc2ySwM_228.5273 Anthoceros agrestis HOM05D004669 ORTHO05D005767 5.7e-07 59.7 147 28.6
Actinidia15803 Actinidia chinensis HOM05D004669 ORTHO05D005767 1.3e-06 58.5 147 26.5
Cfa026191 Carpinus fangiana HOM05D005667 ORTHO05D124936 1.3e-06 58.5 312 26.0
HanXRQChr04g0096711 Helianthus annuus HOM05D004669 ORTHO05D005767 1.3e-06 58.5 176 26.1
HanXRQChr04g0097171 Helianthus annuus HOM05D004669 ORTHO05D005767 1.3e-06 58.5 176 26.1
Actinidia01772 Actinidia chinensis HOM05D004669 ORTHO05D005767 1.7e-06 58.2 156 26.3
LjContig00155g0017542 Lotus japonicus HOM05D004669 ORTHO05D005767 1.7e-06 58.2 174 25.3
Duzib192G0063 Durio zibethinus HOM05D004669 ORTHO05D005767 2.2e-06 57.8 147 25.9
TWI12G0769 Tripterygium wilfordii HOM05D004669 ORTHO05D005767 2.2e-06 57.8 206 23.3
CSS0009653 Camellia sinensis var. sinensis HOM05D004669 ORTHO05D005767 2.8e-06 57.4 206 24.3
CiPaw.02G154600 Carya illinoinensis HOM05D004669 ORTHO05D005767 2.8e-06 57.4 147 25.2
COL.COLO4_12887 Corchorus olitorius HOM05D004669 ORTHO05D005767 2.8e-06 57.4 160 25.6
Dinv30566 Davidia involucrata HOM05D004669 ORTHO05D005767 2.8e-06 57.4 147 25.9
Manes.11G052400 Manihot esculenta HOM05D004669 ORTHO05D005767 2.8e-06 57.4 176 24.4
Thecc.06G074100 Theobroma cacao HOM05D004669 ORTHO05D005767 2.8e-06 57.4 147 25.2
Ca_02514_v3 Cicer arietinum L. HOM05D004669 ORTHO05D005767 3.7e-06 57.0 150 26.7
Lsat_1_v5_gn_1_33541 Lactuca sativa HOM05D004669 ORTHO05D005767 3.7e-06 57.0 176 25.6
Lalb_Chr11g0073441 Lupinus albus HOM05D004669 ORTHO05D005767 3.7e-06 57.0 147 24.5
Nn8g39375 Nelumbo nucifera HOM05D004669 ORTHO05D005767 3.7e-06 57.0 174 25.3
HPP92_024438 Vanilla planifolia HOM05D004669 ORTHO05D005767 3.7e-06 57.0 139 25.2
Zm00001eb293800 Zea mays HOM05D004669 ORTHO05D005767 3.7e-06 57.0 206 23.3
Thhalv10006752m.g Eutrema salsugineum HOM05D004669 ORTHO05D005767 4.8e-06 56.6 147 27.2
Nitab4.5_0000671g0170 Nicotiana tabacum HOM05D004669 ORTHO05D005767 4.8e-06 56.6 147 25.2
Nitab4.5_0023790g0010 Nicotiana tabacum HOM05D004669 ORTHO05D005767 4.8e-06 56.6 147 25.2
Sed0010016 Sechium edule HOM05D004669 ORTHO05D005767 4.8e-06 56.6 174 24.7
TPR.G37778 Trifolium pratense HOM05D004669 ORTHO05D005767 4.8e-06 56.6 161 26.7
ClCG06G013830 Citrullus lanatus HOM05D004669 ORTHO05D005767 6.3e-06 56.2 176 23.3
ClCG07G012820 Citrullus lanatus HOM05D004669 ORTHO05D005767 6.3e-06 56.2 176 23.3
Ciclev10024861m.g Citrus clementina HOM05D004669 ORTHO05D005767 6.3e-06 56.2 149 26.2
MELO3C017903.2 Cucumis melo HOM05D004669 ORTHO05D005767 6.3e-06 56.2 176 23.3
CsaV3_4G001370 Cucumis sativus L. HOM05D004669 ORTHO05D005767 6.3e-06 56.2 176 23.3
Medtr7g076230 Medicago truncatula HOM05D004669 ORTHO05D005767 6.3e-06 56.2 161 26.1
QL05p027590 Quercus lobata HOM05D004669 ORTHO05D005767 6.3e-06 56.2 147 25.2
Sed0027531 Sechium edule HOM05D004669 ORTHO05D005767 6.3e-06 56.2 179 24.0
TAR636G0609 Trochodendron aralioides HOM05D004669 ORTHO05D005767 6.3e-06 56.2 206 23.3
VMungo1309G3168 Vigna mungo HOM05D004669 ORTHO05D005767 6.3e-06 56.2 165 26.1
AagrBONN_evm.TU.Sc2ySwM_344.121 Anthoceros agrestis HOM05D000464 ORTHO05D006292 8.2e-06 55.8 251 21.5
Cfa002013 Carpinus fangiana HOM05D004669 ORTHO05D005767 8.2e-06 55.8 147 25.2
AUR62011570 Chenopodium quinoa HOM05D004669 ORTHO05D005767 8.2e-06 55.8 176 24.4
AUR62016387 Chenopodium quinoa HOM05D004669 ORTHO05D005767 8.2e-06 55.8 176 24.4
Cc04_g03970 Coffea canephora HOM05D004669 ORTHO05D005767 8.2e-06 55.8 147 25.2
Potri.001G173500 Populus trichocarpa HOM05D004669 ORTHO05D005767 8.2e-06 55.8 197 23.4
PGR102G1063 Punica granatum HOM05D002303 ORTHO05D006504 8.2e-06 55.8 174 25.3
Sed0001284 Sechium edule HOM05D004669 ORTHO05D005767 8.2e-06 55.8 176 24.4
Zm00001eb215430 Zea mays HOM05D003723 ORTHO05D004306 8.2e-06 55.8 187 25.7


User provided reference genes

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