Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0763G146 Amborella trichopoda HOM05D003743 ORTHO05D004311 0.0e+00 1175.6 625 100.0
TAR627G0572 Trochodendron aralioides HOM05D003743 ORTHO05D004311 1.1e-196 690.6 672 61.2
MBI04_g36401_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 6.1e-192 674.9 663 61.4
VMungo0251G3484 Vigna mungo HOM05D003743 ORTHO05D004311 7.5e-190 667.9 664 60.1
Phvul.002G226300 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 1.4e-188 663.7 661 59.9
Glyma.07G194200 Glycine max HOM05D003743 ORTHO05D004311 1.2e-187 660.6 663 59.0
TAR629G2996 Trochodendron aralioides HOM05D003743 ORTHO05D004311 6.5e-186 654.8 672 59.2
Glyma.13G182500 Glycine max HOM05D003743 ORTHO05D004311 1.9e-185 653.3 668 58.4
CDE02G2043 Ceratophyllum demersum HOM05D003743 ORTHO05D004311 7.2e-185 651.4 648 60.5
Eucgr.E03353 Eucalyptus grandis HOM05D003743 ORTHO05D004311 2.1e-184 649.8 667 59.1
Nn1g07800 Nelumbo nucifera HOM05D003743 ORTHO05D004311 3.6e-184 649.0 675 59.4
Dinv07531 Davidia involucrata HOM05D003743 ORTHO05D004311 6.1e-184 648.3 668 60.8
Manes.16G024900 Manihot esculenta HOM05D003743 ORTHO05D004311 1.8e-183 646.7 670 58.8
Potri.004G039500 Populus trichocarpa HOM05D003743 ORTHO05D004311 4.0e-183 645.6 668 57.8
FAN14G3620 Fragaria x ananassa HOM05D003743 ORTHO05D004311 3.4e-182 642.5 666 58.0
SEGI_13209 Sequoiadendron giganteum HOM05D003743 ORTHO05D004311 1.3e-181 640.6 632 59.5
Haze_06507 Corylus avellana HOM05D003743 ORTHO05D004311 2.8e-181 639.4 666 58.3
Psat7g112160 Pisum sativum HOM05D003743 ORTHO05D004311 3.7e-181 639.0 667 57.3
FvH4_3g04783 Fragaria vesca HOM05D003743 ORTHO05D004311 4.8e-181 638.6 662 58.3
Prupe.3G050300 Prunus persica HOM05D003743 ORTHO05D004311 8.3e-181 637.9 671 58.6
FAN16G2290 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.1e-180 637.5 662 58.2
FAN21G0113 Fragaria x ananassa HOM05D003743 ORTHO05D004311 2.4e-180 636.3 662 58.0
Ca_25733_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 3.1e-180 636.0 665 58.2
MBI16_g34925_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 9.1e-180 634.4 649 59.9
Thecc.06G191600 Theobroma cacao HOM05D003743 ORTHO05D004311 9.1e-180 634.4 667 58.3
Oeu050830.1 Olea europaea HOM05D003743 ORTHO05D004311 2.0e-179 633.3 626 60.9
PGR042G1300 Punica granatum HOM05D003743 ORTHO05D004311 2.0e-179 633.3 672 56.7
Sabra04G0024300 Salix brachista HOM05D003743 ORTHO05D004311 2.0e-179 633.3 670 57.2
Duzib160G0164 Durio zibethinus HOM05D003743 ORTHO05D004311 3.5e-179 632.5 664 58.6
TWI23G0181 Tripterygium wilfordii HOM05D003743 ORTHO05D004311 1.0e-178 630.9 670 58.2
Medtr4g089070 Medicago truncatula HOM05D003743 ORTHO05D004311 1.3e-178 630.6 668 57.3
Potri.011G047900 Populus trichocarpa HOM05D003743 ORTHO05D004311 2.3e-178 629.8 674 57.0
MD10G1061800 Malus domestica HOM05D003743 ORTHO05D004311 6.5e-178 628.2 672 58.6
Duzib235G1026 Durio zibethinus HOM05D003743 ORTHO05D004311 8.6e-178 627.9 667 57.4
Hma1.2p1_0126F.1_g059170 Hydrangea macrophylla HOM05D003743 ORTHO05D004311 3.3e-177 625.9 660 58.8
RcHm_v2.0_Chr5g0007801 Rosa chinensis HOM05D003743 ORTHO05D004311 3.3e-177 625.9 662 57.3
CsaV3_4G005020 Cucumis sativus L. HOM05D003743 ORTHO05D004311 1.2e-176 624.0 677 57.3
HPP92_024423 Vanilla planifolia HOM05D003743 ORTHO05D004311 1.6e-176 623.6 664 58.1
CSS0028072 Camellia sinensis var. sinensis HOM05D003743 ORTHO05D004311 6.1e-176 621.7 641 61.2
CiPaw.10G046600 Carya illinoinensis HOM05D003743 ORTHO05D004311 2.3e-175 619.8 669 57.1
FAN03G0627 Fragaria x ananassa HOM05D003743 ORTHO05D004311 2.3e-175 619.8 662 57.4
Cpa.g.sc27.76 Carica papaya HOM05D003743 ORTHO05D004311 2.0e-174 616.7 678 56.3
Gohir.D10G024500 Gossypium hirsutum HOM05D003743 ORTHO05D004311 2.0e-174 616.7 667 57.7
TPR.G12063 Trifolium pratense HOM05D003743 ORTHO05D004311 2.0e-174 616.7 663 56.4
Gohir.A10G023800 Gossypium hirsutum HOM05D003743 ORTHO05D004311 1.3e-173 614.0 667 57.3
COL.COLO4_31510 Corchorus olitorius HOM05D003743 ORTHO05D004311 1.7e-173 613.6 669 57.8
Sed0012938 Sechium edule HOM05D003743 ORTHO05D004311 3.7e-173 612.5 653 58.5
Gorai.011G025800 Gossypium raimondii HOM05D003743 ORTHO05D004311 4.9e-173 612.1 666 57.4
THA.LOC104819165 Tarenaya hassleriana HOM05D003743 ORTHO05D004311 4.9e-173 612.1 659 57.2
Lalb_Chr05g0218341 Lupinus albus HOM05D003743 ORTHO05D004311 1.4e-172 610.5 659 55.7
CSS0027200 Camellia sinensis var. sinensis HOM05D003743 ORTHO05D004311 5.4e-172 608.6 644 57.9
SGA_v2.0_scaffold100G29640 Striga asiatica HOM05D003743 ORTHO05D004311 7.0e-172 608.2 642 56.9
arahy.Tifrunner.gnm1.ann1.I4CLDN Arachis hypogaea HOM05D003743 ORTHO05D004311 9.2e-172 607.8 659 57.4
Migut.M01180 Erythranthe guttata HOM05D003743 ORTHO05D004311 9.2e-172 607.8 638 58.6
Sabra11G0033300 Salix brachista HOM05D003743 ORTHO05D004311 2.7e-171 606.3 671 56.0
Aqoxy1G03805 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 5.9e-171 605.1 653 57.9
Ciclev10028000m.g Citrus clementina HOM05D003743 ORTHO05D004311 5.9e-171 605.1 658 56.8
PSO170G2796 Papaver somniferum HOM05D003743 ORTHO05D004311 5.9e-171 605.1 664 57.2
HanXRQChr10g0285841 Helianthus annuus HOM05D003743 ORTHO05D004311 7.8e-171 604.7 598 59.9
QL05p039342 Quercus lobata HOM05D003743 ORTHO05D004311 1.3e-170 604.0 669 54.9
QL10p057179 Quercus lobata HOM05D003743 ORTHO05D004311 1.3e-170 604.0 669 54.9
MELO3C017564.2 Cucumis melo HOM05D003743 ORTHO05D004311 8.6e-170 601.3 671 56.5
Lj4g0023106 Lotus japonicus HOM05D003743 ORTHO05D004311 8.6e-170 601.3 668 56.3
Lsat_1_v5_gn_2_40361 Lactuca sativa HOM05D003743 ORTHO05D004311 1.1e-169 600.9 650 57.4
PSO210G5871 Papaver somniferum HOM05D003743 ORTHO05D004311 2.5e-169 599.7 673 56.8
Thhalv10023338m.g Eutrema salsugineum HOM05D003743 ORTHO05D004311 1.6e-168 597.0 656 54.9
Ah.09g235750 Amaranthus hybridus HOM05D003743 ORTHO05D004311 2.0e-166 590.1 658 56.7
FAN14G1138 Fragaria x ananassa HOM05D003743 ORTHO05D004311 9.8e-166 587.8 663 54.8
FvH4_6g07870 Fragaria vesca HOM05D003743 ORTHO05D004311 1.3e-165 587.4 663 54.6
Prupe.6G309900 Prunus persica HOM05D003743 ORTHO05D004311 3.7e-165 585.9 659 55.1
QL03p016879 Quercus lobata HOM05D003743 ORTHO05D004311 4.9e-165 585.5 666 54.8
RhsimUnG0044100 Rhododendron simsii HOM05D003743 ORTHO05D004311 6.4e-165 585.1 678 56.0
Carub.0002s0416 Capsella rubella HOM05D003743 ORTHO05D004311 8.3e-165 584.7 658 54.6
BcaC06g31829 Brassica carinata HOM05D003743 ORTHO05D004311 3.2e-164 582.8 659 55.4
FAN05G4405 Fragaria x ananassa HOM05D003743 ORTHO05D004311 4.1e-164 582.4 663 54.0
RcHm_v2.0_Chr3g0457571 Rosa chinensis HOM05D003743 ORTHO05D004311 9.2e-164 581.3 664 54.2
Aa31LG2G9550 Aethionema arabicum HOM05D003743 ORTHO05D004311 1.6e-163 580.5 657 54.8
Peaxi162Scf00379g00092 Petunia axillaris HOM05D003743 ORTHO05D004311 7.8e-163 578.2 665 55.5
FAN09G3903 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.3e-162 577.4 663 53.1
unitig_748.g8020 Utricularia gibba HOM05D003743 ORTHO05D004311 2.3e-162 576.6 640 57.2
Nitab4.5_0003668g0110 Nicotiana tabacum HOM05D003743 ORTHO05D004311 1.1e-161 574.3 663 55.1
AL2G15400 Arabidopsis lyrata HOM05D003743 ORTHO05D004311 7.3e-161 571.6 662 53.8
CAN.G1627.16 Capsicum annuum HOM05D003743 ORTHO05D004311 7.3e-161 571.6 663 54.9
Sp2g03480 Schrenkiella parvula HOM05D003743 ORTHO05D004311 7.3e-161 571.6 662 54.2
Cc02_g12930 Coffea canephora HOM05D003743 ORTHO05D004311 9.5e-161 571.2 650 54.8
Rhsim07G0025200 Rhododendron simsii HOM05D003743 ORTHO05D004311 1.2e-160 570.9 679 55.5
Solyc02g078580.1 Solanum lycopersicum HOM05D003743 ORTHO05D004311 2.8e-160 569.7 663 55.2
Atru.chr7.2377 Acer truncatum HOM05D003743 ORTHO05D004311 3.6e-160 569.3 660 55.3
AT1G61040 Arabidopsis thaliana HOM05D003743 ORTHO05D004311 3.6e-160 569.3 662 53.8
EL10Ac8g20336 Beta vulgaris HOM05D003743 ORTHO05D004311 3.6e-160 569.3 656 54.1
Sopen02g023440 Solanum pennellii HOM05D003743 ORTHO05D004311 3.6e-160 569.3 663 55.1
CANSAT35G0257 Cannabis sativa HOM05D003743 ORTHO05D004311 8.0e-160 568.2 675 53.2
CARHR052180 Cardamine hirsuta HOM05D003743 ORTHO05D004311 1.4e-159 567.4 664 53.8
C01p37700 Brassica napus HOM05D003743 ORTHO05D004311 1.8e-159 567.0 657 55.7
PGSC0003DMG400022434 Solanum tuberosum HOM05D003743 ORTHO05D004311 1.8e-159 567.0 669 54.6
Lj1g0019037 Lotus japonicus HOM05D003743 ORTHO05D004311 2.3e-159 566.6 655 55.0
Glyma.03G168800 Glycine max HOM05D003743 ORTHO05D004311 4.0e-159 565.8 659 55.5
Ah.04g152550 Amaranthus hybridus HOM05D003743 ORTHO05D004311 8.9e-159 564.7 668 54.9
FAN02G2028 Fragaria x ananassa HOM05D003743 ORTHO05D004311 8.9e-159 564.7 646 52.9
Nitab4.5_0003347g0010 Nicotiana tabacum HOM05D003743 ORTHO05D004311 7.5e-158 561.6 665 54.3
SalBow8G3648 Salvia bowleyana HOM05D003743 ORTHO05D004311 9.8e-158 561.2 648 54.3
BcaC09g49339 Brassica carinata HOM05D003743 ORTHO05D004311 1.7e-157 560.5 651 55.0
Sc05g0007850 Simmondsia chinensis HOM05D003743 ORTHO05D004311 8.3e-157 558.1 645 54.1
Glyma.19G170200 Glycine max HOM05D003743 ORTHO05D004311 2.4e-156 556.6 664 54.5
A01p29850 Brassica napus HOM05D003743 ORTHO05D004311 2.1e-155 553.5 659 54.5
BcaC02g10594 Brassica carinata HOM05D003743 ORTHO05D004311 3.5e-155 552.7 660 53.8
C04p25600 Brassica napus HOM05D003743 ORTHO05D004311 3.5e-155 552.7 660 53.8
AUR62016972 Chenopodium quinoa HOM05D003743 ORTHO05D004311 4.6e-155 552.4 659 53.1
AUR62020979 Chenopodium quinoa HOM05D003743 ORTHO05D004311 7.8e-155 551.6 667 52.9
MBI16_g34928_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 3.9e-154 549.3 632 56.0
Lj8P171T25 Lonicera japonica HOM05D003743 ORTHO05D004311 5.0e-154 548.9 530 61.1
Phvul.001G167200 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 1.6e-152 543.9 664 52.9
ECA240G0220 Erigeron canadensis HOM05D003743 ORTHO05D004311 2.8e-152 543.1 671 52.2
BcaB04g20309 Brassica carinata HOM05D003743 ORTHO05D004311 2.3e-151 540.0 674 52.2
Lalb_Chr16g0383591 Lupinus albus HOM05D003743 ORTHO05D004311 2.3e-151 540.0 661 51.0
DCAR_008049 Daucus carota HOM05D003743 ORTHO05D004311 1.2e-150 537.7 671 52.2
Aqoxy3G03252 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 3.4e-150 536.2 662 51.8
DCAR_004097 Daucus carota HOM05D003743 ORTHO05D004311 3.7e-149 532.7 670 51.9
BraA01t03113Z Brassica rapa HOM05D003743 ORTHO05D004311 1.1e-148 531.2 658 52.7
Psat3g052160 Pisum sativum HOM05D003743 ORTHO05D004311 1.9e-148 530.4 648 53.2
FAN25G1603 Fragaria x ananassa HOM05D003743 ORTHO05D004311 7.1e-148 528.5 617 54.1
CANSAT54G1490 Cannabis sativa HOM05D003743 ORTHO05D004311 2.1e-147 526.9 636 52.7
SHI01836 Sapria himalayana HOM05D003743 ORTHO05D004311 2.1e-147 526.9 665 50.2
Zm00001eb410600 Zea mays HOM05D003743 ORTHO05D004311 4.6e-147 525.8 662 50.9
Os12g0535900 Oryza sativa ssp. japonica HOM05D003743 ORTHO05D004311 6.0e-147 525.4 605 52.2
Zm00001eb137720 Zea mays HOM05D003743 ORTHO05D004311 1.3e-146 524.2 664 50.9
Phvul.001G224300 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 1.7e-146 523.9 674 50.7
Ca_08759_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 2.3e-146 523.5 546 57.3
Ca_30219_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 2.3e-146 523.5 546 57.3
VMungo1383G2741 Vigna mungo HOM05D003743 ORTHO05D004311 5.1e-146 522.3 668 51.2
MD04G1191400 Malus domestica HOM05D003743 ORTHO05D004311 3.3e-145 519.6 662 50.6
Lalb_Chr04g0260391 Lupinus albus HOM05D003743 ORTHO05D004311 5.2e-143 512.3 679 48.5
AUR62043193 Chenopodium quinoa HOM05D003743 ORTHO05D004311 2.0e-142 510.4 664 50.3
Glyma.03G230500 Glycine max HOM05D003743 ORTHO05D004311 2.9e-141 506.5 686 49.7
VMungo1383G3375 Vigna mungo HOM05D003743 ORTHO05D004311 6.4e-141 505.4 657 50.8
AUR62014784 Chenopodium quinoa HOM05D003743 ORTHO05D004311 1.5e-137 494.2 633 51.0
AagrBONN_evm.TU.Sc2ySwM_368.1522 Anthoceros agrestis HOM05D003743 ORTHO05D004311 4.3e-137 492.7 636 49.4
TPR.G30857 Trifolium pratense HOM05D003743 ORTHO05D004311 1.2e-136 491.1 647 50.5
Psat7g225840 Pisum sativum HOM05D003743 ORTHO05D004311 3.6e-136 489.6 665 48.6
DCAR_004099 Daucus carota HOM05D003743 ORTHO05D004311 4.4e-134 482.6 670 48.1
Medtr7g099060 Medicago truncatula HOM05D003743 ORTHO05D004311 1.3e-133 481.1 559 53.3
Ca_20186_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 4.9e-133 479.2 685 47.2
TPR.G34103 Trifolium pratense HOM05D003743 ORTHO05D004311 4.9e-133 479.2 666 47.0
Sc06g0009130 Simmondsia chinensis HOM05D003743 ORTHO05D004311 4.2e-132 476.1 644 49.4
Pp3c12_17420 Physcomitrium patens HOM05D003743 ORTHO05D004311 1.2e-131 474.6 595 50.6
Mapoly0001s0024 Marchantia polymorpha HOM05D003743 ORTHO05D004311 2.7e-131 473.4 659 47.3
Lj1g0026238 Lotus japonicus HOM05D003743 ORTHO05D004311 1.6e-128 464.2 638 48.1
Medtr4g032885 Medicago truncatula HOM05D003743 ORTHO05D004311 6.2e-128 462.2 661 47.8
EL10Ac8g18529 Beta vulgaris HOM05D003743 ORTHO05D004311 1.4e-127 461.1 532 54.3
arahy.Tifrunner.gnm1.ann1.58ANB0 Arachis hypogaea HOM05D003743 ORTHO05D004311 6.7e-122 442.2 651 46.4
Mapoly0009s0176 Marchantia polymorpha HOM05D003743 ORTHO05D004311 2.8e-104 383.6 648 42.7
SMO118G0429 Selaginella moellendorffii HOM05D003743 ORTHO05D004311 2.4e-95 354.0 535 44.5
Glyma.13G060000 Glycine max HOM05D003743 ORTHO05D004311 3.7e-88 330.1 407 49.9
FvH4_6g03621 Fragaria vesca HOM05D003743 ORTHO05D004311 3.1e-87 327.0 399 51.4
BolC1t03734H Brassica oleracea HOM05D003743 ORTHO05D004311 2.0e-86 324.3 424 52.6
A03p68920 Brassica napus HOM05D003743 ORTHO05D004311 1.9e-84 317.8 648 40.4
GSVIVG01006453001 Vitis vinifera HOM05D003743 ORTHO05D004311 5.3e-79 299.7 214 77.6
Actinidia05611 Actinidia chinensis HOM05D003743 ORTHO05D004311 1.2e-78 298.5 406 51.2
CBR_g30024 Chara braunii HOM05D003743 ORTHO05D004311 2.0e-70 271.2 627 34.3
BraSC39t46172Z Brassica rapa HOM05D003743 ORTHO05D004311 3.2e-68 263.8 263 57.0
ECA248G2279 Erigeron canadensis HOM05D003743 ORTHO05D004311 1.9e-60 238.0 412 41.0
Oeu016117.1 Olea europaea HOM05D003743 ORTHO05D004311 3.3e-60 237.3 564 38.1
Lj1P877T22 Lonicera japonica HOM05D003743 ORTHO05D004311 1.2e-59 235.3 297 51.2
Zm00001eb087640 Zea mays HOM05D003743 ORTHO05D004311 9.5e-52 209.1 276 45.7
MBI04_g35990_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 8.9e-34 149.4 221 49.3
Lalb_Chr20g0113451 Lupinus albus HOM05D003743 ORTHO05D004311 3.5e-30 137.5 118 55.9
FvH4_6g03622 Fragaria vesca HOM05D003743 ORTHO05D004311 8.6e-29 132.9 77 83.1
Aqoxy3G03215 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 6.2e-27 126.7 112 52.7
EL10Ac4g08952 Beta vulgaris HOM05D003743 ORTHO05D004311 8.1e-27 126.3 146 51.4
ECA246G3327 Erigeron canadensis HOM05D001482 ORTHO05D001499 5.4e-23 113.6 89 66.3
SGA_v2.0_scaffold49G18283 Striga asiatica HOM05D003743 ORTHO05D004311 2.7e-22 111.3 380 26.3
MD05G1317500 Malus domestica HOM05D003743 ORTHO05D004311 8.1e-19 99.8 127 52.8
Aqoxy3G03214 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 6.9e-18 96.7 78 65.4
Aqoxy3G03213 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 1.3e-16 92.4 74 63.5
ATR0589G045 Amborella trichopoda HOM05D003743 ORTHO05D004311 7.1e-15 86.7 71 77.5
Rhsim02G0125200 Rhododendron simsii HOM05D003743 ORTHO05D004311 2.7e-14 84.7 60 60.0
PRCOL_00005809 Prasinoderma coloniale HOM05D003743 ORTHO05D004311 1.3e-13 82.4 390 26.4
EL10Ac5g12107 Beta vulgaris HOM05D003743 ORTHO05D004311 4.3e-12 77.4 47 76.6
Cre03.g196450 Chlamydomonas reinhardtii HOM05D003743 ORTHO05D004311 1.4e-10 72.4 577 23.1
SEGI_28495 Sequoiadendron giganteum HOM05D003743 ORTHO05D004311 2.2e-08 65.1 64 62.5
Nitab4.5_0000556g0130 Nicotiana tabacum HOM05D002396 ORTHO05D002779 9.3e-07 59.7 96 46.9


User provided reference genes

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