Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0763G089 Amborella trichopoda HOM05D004644 ORTHO05D005700 6.5e-182 640.6 317 100.0
MBI18_g00904_MAGBIO Magnolia biondii HOM05D004644 ORTHO05D005700 9.3e-88 327.8 324 53.1
TAR633G1934 Trochodendron aralioides HOM05D004644 ORTHO05D005700 1.9e-85 320.1 322 51.2
Aqoxy2G01714 Aquilegia oxysepala HOM05D004644 ORTHO05D005700 2.6e-82 309.7 310 51.6
PSO339G1979 Papaver somniferum HOM05D004644 ORTHO05D005700 6.2e-76 288.5 310 50.0
Dinv35798 Davidia involucrata HOM05D004644 ORTHO05D005700 2.6e-74 283.1 319 47.6
PSO801G0701 Papaver somniferum HOM05D004644 ORTHO05D005700 1.3e-73 280.8 310 49.0
CSS0046520 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 7.9e-71 271.6 312 46.8
QL08p054123 Quercus lobata HOM05D004644 ORTHO05D005700 1.3e-70 270.8 309 46.3
Actinidia28913 Actinidia chinensis HOM05D004644 ORTHO05D005700 3.9e-70 269.2 309 46.9
GSVIVG01033660001 Vitis vinifera HOM05D004644 ORTHO05D005700 6.7e-70 268.5 310 47.1
Duzib093G1101 Durio zibethinus HOM05D004644 ORTHO05D005700 1.5e-69 267.3 308 45.5
Cpa.g.sc102.18 Carica papaya HOM05D004644 ORTHO05D005700 3.3e-69 266.2 312 45.5
MD12G1109200 Malus domestica HOM05D004644 ORTHO05D005700 4.3e-69 265.8 315 46.7
Rhsim03G0090100 Rhododendron simsii HOM05D004644 ORTHO05D005700 4.3e-69 265.8 315 47.9
Migut.J00643 Erythranthe guttata HOM05D004644 ORTHO05D005700 4.8e-68 262.3 308 44.8
COL.COLO4_26937 Corchorus olitorius HOM05D004644 ORTHO05D005700 6.3e-68 261.9 309 44.0
Potri.010G228000 Populus trichocarpa HOM05D004644 ORTHO05D005700 1.1e-67 261.2 314 44.6
Lj2C119G5 Lonicera japonica HOM05D004644 ORTHO05D005700 1.4e-67 260.8 310 44.2
Eucgr.A01659 Eucalyptus grandis HOM05D004644 ORTHO05D005700 1.8e-67 260.4 309 45.0
TPR.G32811 Trifolium pratense HOM05D004644 ORTHO05D005700 2.4e-67 260.0 312 45.2
Oeu045234.3 Olea europaea HOM05D004644 ORTHO05D005700 6.9e-67 258.5 315 45.1
TWI53G0078 Tripterygium wilfordii HOM05D004644 ORTHO05D005700 9.0e-67 258.1 307 44.6
FAN09G2255 Fragaria x ananassa HOM05D004644 ORTHO05D005700 1.5e-66 257.3 316 44.3
Sabra06G0097000 Salix brachista HOM05D004644 ORTHO05D005700 2.6e-66 256.5 305 47.2
FAN05G3668 Fragaria x ananassa HOM05D004644 ORTHO05D005700 5.9e-66 255.4 316 44.3
FAN05G5479 Fragaria x ananassa HOM05D004644 ORTHO05D005700 5.9e-66 255.4 316 44.3
Prupe.7G127800 Prunus persica HOM05D004644 ORTHO05D005700 5.9e-66 255.4 316 45.9
FvH4_6g16560 Fragaria vesca HOM05D004644 ORTHO05D005700 7.6e-66 255.0 314 44.3
Potri.006G122800 Populus trichocarpa HOM05D004644 ORTHO05D005700 1.0e-65 254.6 314 44.6
Prupe.2G207900 Prunus persica HOM05D004644 ORTHO05D005700 2.9e-65 253.1 316 43.0
MD01G1102300 Malus domestica HOM05D004644 ORTHO05D005700 3.8e-65 252.7 310 43.9
vmacro07303 Vaccinium macrocarpon HOM05D004644 ORTHO05D005700 3.8e-65 252.7 312 44.9
Gorai.006G162300 Gossypium raimondii HOM05D004644 ORTHO05D005700 3.2e-64 249.6 308 41.9
Lalb_Chr20g0112551 Lupinus albus HOM05D004644 ORTHO05D005700 3.2e-64 249.6 319 44.2
FAN02G4433 Fragaria x ananassa HOM05D004644 ORTHO05D005700 4.2e-64 249.2 314 43.0
RcHm_v2.0_Chr3g0470481 Rosa chinensis HOM05D004644 ORTHO05D005700 5.5e-64 248.8 313 42.8
CsaV3_6G039930 Cucumis sativus L. HOM05D004644 ORTHO05D005700 7.2e-64 248.4 308 42.5
Gohir.D09G141400 Gossypium hirsutum HOM05D004644 ORTHO05D005700 7.2e-64 248.4 308 41.9
Manes.07G133120 Manihot esculenta HOM05D004644 ORTHO05D005700 9.3e-64 248.1 310 43.2
Atru.chr8.1780 Acer truncatum HOM05D004644 ORTHO05D005700 1.2e-63 247.7 312 44.2
EL10Ac7g16657 Beta vulgaris HOM05D004644 ORTHO05D005700 3.6e-63 246.1 312 44.2
Gohir.A09G145300 Gossypium hirsutum HOM05D004644 ORTHO05D005700 3.6e-63 246.1 308 41.9
VMungo1383G2434 Vigna mungo HOM05D004644 ORTHO05D005700 4.6e-63 245.7 310 43.5
Phvul.001G180000 Phaseolus vulgaris HOM05D004644 ORTHO05D005700 6.1e-63 245.4 307 44.3
Cfa017634 Carpinus fangiana HOM05D004644 ORTHO05D005700 1.0e-62 244.6 309 44.3
Glyma.03G184600 Glycine max HOM05D004644 ORTHO05D005700 1.3e-62 244.2 307 43.6
Lj1g0025951 Lotus japonicus HOM05D004644 ORTHO05D005700 3.0e-62 243.0 308 42.9
Ca_08912_v3 Cicer arietinum L. HOM05D004644 ORTHO05D005700 3.9e-62 242.7 312 42.3
Aa31LG1G21710 Aethionema arabicum HOM05D004644 ORTHO05D005700 6.7e-62 241.9 305 42.6
MELO3C024470.2 Cucumis melo HOM05D004644 ORTHO05D005700 6.7e-62 241.9 308 41.2
SGA_v2.0_scaffold75G24833 Striga asiatica HOM05D004644 ORTHO05D005700 6.7e-62 241.9 311 42.1
MSTRG.5768 Avicennia marina HOM05D004644 ORTHO05D005700 1.9e-61 240.4 311 42.1
Sopen09g003150 Solanum pennellii HOM05D004644 ORTHO05D005700 2.5e-61 240.0 311 43.1
DCAR_009308 Daucus carota HOM05D004644 ORTHO05D005700 4.3e-61 239.2 314 40.8
PGSC0003DMG401003893 Solanum tuberosum HOM05D004644 ORTHO05D005700 4.3e-61 239.2 311 43.1
arahy.Tifrunner.gnm1.ann1.W70S5M Arachis hypogaea HOM05D004644 ORTHO05D005700 7.4e-61 238.4 308 42.5
Sc02g0001570 Simmondsia chinensis HOM05D004644 ORTHO05D005700 7.4e-61 238.4 307 44.3
Zm00001eb393970 Zea mays HOM05D004644 ORTHO05D005700 7.4e-61 238.4 304 43.8
QL07p043006 Quercus lobata HOM05D004644 ORTHO05D005700 9.7e-61 238.0 315 42.2
Zm00001eb393990 Zea mays HOM05D004644 ORTHO05D005700 1.3e-60 237.7 304 43.8
Os10g0545600 Oryza sativa ssp. japonica HOM05D004644 ORTHO05D005700 8.2e-60 235.0 308 43.2
Sed0011501 Sechium edule HOM05D004644 ORTHO05D005700 1.8e-59 233.8 311 42.1
FAN14G1031 Fragaria x ananassa HOM05D004644 ORTHO05D005700 6.9e-59 231.9 288 44.8
ECA238G2777 Erigeron canadensis HOM05D004644 ORTHO05D005700 7.7e-58 228.4 307 41.7
HanXRQChr14g0432961 Helianthus annuus HOM05D004644 ORTHO05D005700 7.7e-58 228.4 308 41.6
AUR62026918 Chenopodium quinoa HOM05D004644 ORTHO05D005700 1.3e-57 227.6 309 43.0
AUR62042062 Chenopodium quinoa HOM05D004644 ORTHO05D005700 2.2e-57 226.9 309 43.4
PGR004G1497 Punica granatum HOM05D004644 ORTHO05D005700 2.9e-57 226.5 276 45.7
Medtr7g102280 Medicago truncatula HOM05D004644 ORTHO05D005700 5.0e-57 225.7 317 39.7
Nitab4.5_0000578g0020 Nicotiana tabacum HOM05D004644 ORTHO05D005700 1.4e-56 224.2 306 42.5
Lj1g0007058 Lotus japonicus HOM05D004644 ORTHO05D005700 1.9e-56 223.8 325 39.4
Cc06_g04370 Coffea canephora HOM05D004644 ORTHO05D005700 2.5e-56 223.4 311 42.8
THA.LOC104816355 Tarenaya hassleriana HOM05D004644 ORTHO05D005700 7.2e-56 221.9 307 39.1
ClCG04G009350 Citrullus lanatus HOM05D004644 ORTHO05D005700 3.6e-55 219.5 313 40.6
Solyc09g008330.3 Solanum lycopersicum HOM05D004644 ORTHO05D005700 6.1e-55 218.8 289 42.2
Lsat_1_v5_gn_2_30721 Lactuca sativa HOM05D004644 ORTHO05D005700 1.0e-54 218.0 286 44.4
Psat3g041720 Pisum sativum HOM05D004644 ORTHO05D005700 6.7e-54 215.3 315 41.0
CiPaw.09G171100 Carya illinoinensis HOM05D004644 ORTHO05D005700 5.7e-53 212.2 249 45.8
CARHR209890 Cardamine hirsuta HOM05D004644 ORTHO05D005700 7.4e-53 211.8 317 38.2
CSS0030902 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 2.2e-52 210.3 256 44.1
Sp6g39290 Schrenkiella parvula HOM05D004644 ORTHO05D005700 2.4e-51 206.8 314 38.2
AL6G12810 Arabidopsis lyrata HOM05D004644 ORTHO05D005700 1.5e-50 204.1 316 37.7
BcaB05g21841 Brassica carinata HOM05D004644 ORTHO05D005700 2.6e-50 203.4 317 38.2
Mapoly0033s0098 Marchantia polymorpha HOM05D004644 ORTHO05D005700 2.6e-50 203.4 353 38.0
BraA02t04761Z Brassica rapa HOM05D004644 ORTHO05D005700 3.4e-50 203.0 314 37.6
Zm00001eb000650 Zea mays HOM05D004644 ORTHO05D005700 5.9e-50 202.2 322 37.9
BolC2t06098H Brassica oleracea HOM05D004644 ORTHO05D005700 1.3e-49 201.1 316 37.7
C02p01080 Brassica napus HOM05D004644 ORTHO05D005700 5.0e-49 199.1 316 37.7
AT5G03450 Arabidopsis thaliana HOM05D004644 ORTHO05D005700 8.5e-49 198.4 315 37.8
Carub.0006s0226 Capsella rubella HOM05D004644 ORTHO05D005700 1.2e-47 194.5 316 37.7
Pp3c22_3930 Physcomitrium patens HOM05D004644 ORTHO05D005700 1.2e-47 194.5 344 37.2
AL6G13290 Arabidopsis lyrata HOM05D004644 ORTHO05D005700 2.8e-44 183.3 297 37.7
SGA_v2.0_scaffold40G15487 Striga asiatica HOM05D004644 ORTHO05D005700 3.7e-44 183.0 292 34.9
Actinidia26658 Actinidia chinensis HOM05D004644 ORTHO05D005700 3.1e-43 179.9 249 41.0
Nitab4.5_0004476g0040 Nicotiana tabacum HOM05D004644 ORTHO05D005700 3.1e-43 179.9 293 39.9
Thhalv10013047m.g Eutrema salsugineum HOM05D004644 ORTHO05D005700 5.3e-43 179.1 317 37.2
CARHR209550 Cardamine hirsuta HOM05D004644 ORTHO05D005700 2.6e-42 176.8 309 35.3
Peaxi162Scf00722g00210 Petunia axillaris HOM05D004644 ORTHO05D005700 4.2e-40 169.5 292 39.4
unitig_8.g4114 Utricularia gibba HOM05D004644 ORTHO05D005700 1.0e-38 164.9 261 36.8
Haze_20518 Corylus avellana HOM05D004644 ORTHO05D005700 6.1e-31 139.0 151 51.7
CDE02G0420 Ceratophyllum demersum HOM05D004644 ORTHO05D005700 2.3e-30 137.1 150 48.0
Thecc.05G069300 Theobroma cacao HOM05D004644 ORTHO05D005700 2.3e-30 137.1 126 55.6
Manes.09G065000 Manihot esculenta HOM05D004644 ORTHO05D005700 5.2e-30 136.0 149 49.7
CBR_g31861 Chara braunii HOM05D004644 ORTHO05D005700 3.4e-29 133.3 222 34.7
CSS0001913 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 1.2e-26 124.8 122 50.8
Nn2g13824 Nelumbo nucifera HOM05D004644 ORTHO05D005700 7.7e-26 122.1 147 42.2
Haze_20519 Corylus avellana HOM05D004644 ORTHO05D005700 7.2e-24 115.5 149 39.6
SEGI_17091 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 3.6e-23 113.2 206 33.0
Glyma.19G185000 Glycine max HOM05D004644 ORTHO05D005700 7.0e-19 99.0 103 43.7
PGR004G0361 Punica granatum HOM05D004644 ORTHO05D005700 1.8e-14 84.3 127 38.6
PGR004G0952 Punica granatum HOM05D004644 ORTHO05D005700 1.3e-12 78.2 81 45.7
MCO15G141 Micromonas commoda HOM05D004644 ORTHO05D005700 4.6e-10 69.7 137 35.8
Glyma.07G162100 Glycine max HOM05D003568 ORTHO05D004104 6.2e-07 59.3 147 33.3
Glyma.18G219501 Glycine max HOM05D000076 ORTHO05D005700 6.8e-06 55.8 63 49.2


User provided reference genes

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