Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0751G111 Amborella trichopoda HOM05D005328 ORTHO05D006049 3.7e-145 518.5 319 100.0
CSS0022453 Camellia sinensis var. sinensis HOM05D005328 ORTHO05D006049 2.3e-41 173.7 333 46.8
Rhsim13G0137800 Rhododendron simsii HOM05D005328 ORTHO05D006049 2.3e-41 173.7 324 43.5
Eucgr.E04239 Eucalyptus grandis HOM05D005328 ORTHO05D006049 2.1e-39 167.2 339 42.8
Hma1.2p1_0391F.1_g142830 Hydrangea macrophylla HOM05D005328 ORTHO05D006049 8.0e-39 165.2 302 43.7
Dinv04372 Davidia involucrata HOM05D005328 ORTHO05D006049 1.8e-38 164.1 325 40.6
CAN.G2049.4 Capsicum annuum HOM05D005328 ORTHO05D006049 2.3e-38 163.7 328 45.1
Manes.03G095600 Manihot esculenta HOM05D005328 ORTHO05D006049 2.3e-38 163.7 334 39.5
COL.COLO4_12851 Corchorus olitorius HOM05D005328 ORTHO05D006049 4.0e-38 162.9 325 47.1
Hund04726 Selenicereus undatus HOM05D005328 ORTHO05D006049 4.0e-38 162.9 360 41.4
Actinidia02271 Actinidia chinensis HOM05D005328 ORTHO05D006049 6.8e-38 162.2 330 43.6
Migut.M01485 Erythranthe guttata HOM05D005328 ORTHO05D006049 6.8e-38 162.2 313 50.8
Lj6g0010372 Lotus japonicus HOM05D005328 ORTHO05D006049 1.2e-37 161.4 321 50.2
Sc13g0008540 Simmondsia chinensis HOM05D005328 ORTHO05D006049 1.2e-37 161.4 318 42.1
Gohir.D02G007001 Gossypium hirsutum HOM05D005328 ORTHO05D006049 2.0e-37 160.6 307 50.2
Thecc.04G160200 Theobroma cacao HOM05D005328 ORTHO05D006049 5.7e-37 159.1 312 47.4
unitig_748.g7855 Utricularia gibba HOM05D005328 ORTHO05D006049 2.2e-36 157.1 318 46.5
Gohir.A02G007200 Gossypium hirsutum HOM05D005328 ORTHO05D006049 2.9e-36 156.8 310 48.7
CDE03G0050 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 4.9e-36 156.0 333 42.0
Aa31LG1G25860 Aethionema arabicum HOM05D005328 ORTHO05D006049 1.1e-35 154.8 333 42.6
Duzib151G0457 Durio zibethinus HOM05D005328 ORTHO05D006049 2.4e-35 153.7 317 49.8
Cpa.g.sc53.124 Carica papaya HOM05D005328 ORTHO05D006049 4.1e-35 152.9 381 36.2
Gorai.005G008200 Gossypium raimondii HOM05D005328 ORTHO05D006049 5.4e-35 152.5 316 50.9
Nitab4.5_0005721g0030 Nicotiana tabacum HOM05D005328 ORTHO05D006049 7.0e-35 152.1 311 44.7
THA.LOC104804861 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 7.0e-35 152.1 374 36.6
THA.LOC104807080 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 7.0e-35 152.1 374 36.6
TWI63G1825 Tripterygium wilfordii HOM05D005328 ORTHO05D006049 2.0e-34 150.6 322 45.3
SGA_v2.0_scaffold7G03648 Striga asiatica HOM05D005328 ORTHO05D006049 2.7e-34 150.2 300 47.7
PGR042G0801 Punica granatum HOM05D005328 ORTHO05D006049 5.9e-34 149.1 347 41.2
AUR62016004 Chenopodium quinoa HOM05D005328 ORTHO05D006049 1.3e-33 147.9 360 45.8
Atru.chr1.2204 Acer truncatum HOM05D005328 ORTHO05D006049 3.0e-33 146.7 387 38.0
BcaC02g12330 Brassica carinata HOM05D005328 ORTHO05D006049 5.0e-33 146.0 342 45.6
Potri.006G000200 Populus trichocarpa HOM05D005328 ORTHO05D006049 5.0e-33 146.0 353 47.6
TAR626G1462 Trochodendron aralioides HOM05D005328 ORTHO05D006049 5.0e-33 146.0 352 43.8
ECA234G3238 Erigeron canadensis HOM05D005328 ORTHO05D006049 6.6e-33 145.6 318 42.8
Lsat_1_v5_gn_4_65161 Lactuca sativa HOM05D005328 ORTHO05D006049 6.6e-33 145.6 296 40.5
Ca_00786_v3 Cicer arietinum L. HOM05D005328 ORTHO05D006049 8.6e-33 145.2 321 49.5
Ca_11373_v3 Cicer arietinum L. HOM05D005328 ORTHO05D006049 8.6e-33 145.2 321 49.5
AUR62021212 Chenopodium quinoa HOM05D005328 ORTHO05D006049 1.5e-32 144.4 339 48.7
BraA05t19414Z Brassica rapa HOM05D005328 ORTHO05D006049 3.3e-32 143.3 363 39.4
A05p04290 Brassica napus HOM05D005328 ORTHO05D006049 7.3e-32 142.1 362 40.3
Sopen02g029040 Solanum pennellii HOM05D005328 ORTHO05D006049 1.6e-31 141.0 352 39.2
BcaB02g08879 Brassica carinata HOM05D005328 ORTHO05D006049 2.8e-31 140.2 373 42.6
Ciclev10015350m.g Citrus clementina HOM05D005328 ORTHO05D006049 2.8e-31 140.2 324 42.3
Oeu016925.1 Olea europaea HOM05D005328 ORTHO05D006049 3.6e-31 139.8 350 42.3
VMungo0540G0318 Vigna mungo HOM05D005328 ORTHO05D006049 3.6e-31 139.8 378 38.4
A03p24730 Brassica napus HOM05D005328 ORTHO05D006049 8.0e-31 138.7 356 42.1
BraA03t11679Z Brassica rapa HOM05D005328 ORTHO05D006049 8.0e-31 138.7 356 42.1
HPP92_007484 Vanilla planifolia HOM05D005328 ORTHO05D006049 1.8e-30 137.5 300 42.3
C04p05070 Brassica napus HOM05D005328 ORTHO05D006049 3.1e-30 136.7 363 43.5
vmacro03583 Vaccinium macrocarpon HOM05D005328 ORTHO05D006049 4.0e-30 136.3 352 34.4
Aqoxy6G01137 Aquilegia oxysepala HOM05D005328 ORTHO05D006049 5.2e-30 136.0 437 36.6
QL05p066147 Quercus lobata HOM05D005328 ORTHO05D006049 8.9e-30 135.2 315 51.1
C03p29470 Brassica napus HOM05D005328 ORTHO05D006049 1.5e-29 134.4 358 41.3
BcaC01g05181 Brassica carinata HOM05D005328 ORTHO05D006049 3.4e-29 133.3 358 41.1
BolC3t15295H Brassica oleracea HOM05D005328 ORTHO05D006049 3.4e-29 133.3 358 41.1
Phvul.006G134100 Phaseolus vulgaris HOM05D005328 ORTHO05D006049 7.5e-29 132.1 377 38.7
Solyc02g084340.3 Solanum lycopersicum HOM05D005328 ORTHO05D006049 7.5e-29 132.1 369 39.3
TPR.G10498 Trifolium pratense HOM05D005328 ORTHO05D006049 9.8e-29 131.7 347 45.8
HanXRQChr17g0558521 Helianthus annuus HOM05D005328 ORTHO05D006049 1.3e-28 131.3 311 42.4
Thhalv10001457m.g Eutrema salsugineum HOM05D005328 ORTHO05D006049 3.7e-28 129.8 331 40.2
CiPaw.10G085200 Carya illinoinensis HOM05D005328 ORTHO05D006049 6.4e-28 129.0 321 49.5
BcaB01g03324 Brassica carinata HOM05D005328 ORTHO05D006049 1.1e-27 128.3 331 42.0
Nitab4.5_0002880g0010 Nicotiana tabacum HOM05D005328 ORTHO05D006049 3.2e-27 126.7 299 48.8
Ah.07g207330 Amaranthus hybridus HOM05D005328 ORTHO05D002024 5.4e-27 125.9 414 35.5
Glyma.15G123900 Glycine max HOM05D005328 ORTHO05D006049 1.2e-26 124.8 382 35.9
MD04G1014200 Malus domestica HOM05D005328 ORTHO05D006049 1.6e-26 124.4 458 36.5
AL4G43160 Arabidopsis lyrata HOM05D005328 ORTHO05D006049 2.7e-26 123.6 374 41.7
Sabra06G0000700 Salix brachista HOM05D005328 ORTHO05D006049 4.6e-26 122.9 353 44.5
arahy.Tifrunner.gnm1.ann1.B05UD4 Arachis hypogaea HOM05D005328 ORTHO05D006049 1.0e-25 121.7 354 42.1
EL10Ac3g05669 Beta vulgaris HOM05D005328 ORTHO05D006049 1.0e-25 121.7 386 38.6
Peaxi162Scf00083g00091 Petunia axillaris HOM05D005328 ORTHO05D006049 1.0e-25 121.7 297 49.8
Sp4g26280 Schrenkiella parvula HOM05D005328 ORTHO05D006049 1.5e-24 117.9 366 39.3
Lalb_Chr15g0088491 Lupinus albus HOM05D005328 ORTHO05D006049 3.3e-24 116.7 405 38.3
CARHR139360 Cardamine hirsuta HOM05D005328 ORTHO05D006049 4.3e-24 116.3 405 32.8
Sed0006700 Sechium edule HOM05D005328 ORTHO05D006049 9.5e-24 115.2 407 34.4
Cc09_g00040 Coffea canephora HOM05D005328 ORTHO05D006049 1.8e-22 110.9 468 29.9
SMO114G0026 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 3.1e-22 110.2 294 37.8
Medtr2g028200 Medicago truncatula HOM05D005328 ORTHO05D006049 2.6e-21 107.1 405 38.8
Os08g0500200 Oryza sativa ssp. japonica HOM05D005328 ORTHO05D006049 2.6e-21 107.1 408 33.3
MELO3C017635.2 Cucumis melo HOM05D005328 ORTHO05D006049 9.8e-21 105.1 328 42.4
THA.LOC104798630 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 1.7e-20 104.4 116 51.7
AT2G44200 Arabidopsis thaliana HOM05D005328 ORTHO05D006049 2.9e-20 103.6 403 35.5
Psat1g170800 Pisum sativum HOM05D005328 ORTHO05D006049 2.9e-20 103.6 391 38.1
arahy.Tifrunner.gnm1.ann1.QMQM64 Arachis hypogaea HOM05D005328 ORTHO05D006049 1.1e-19 101.7 425 35.5
ClCG07G017100 Citrullus lanatus HOM05D005328 ORTHO05D006049 1.1e-19 101.7 323 35.0
PSO017G7149 Papaver somniferum HOM05D005328 ORTHO05D006049 1.1e-19 101.7 410 34.6
SMO143G0138 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 1.1e-19 101.7 314 35.4
RcHm_v2.0_Chr4g0414011 Rosa chinensis HOM05D005328 ORTHO05D006049 1.9e-19 100.9 425 36.5
Glyma.09G018000 Glycine max HOM05D005328 ORTHO05D006049 2.4e-19 100.5 101 61.4
PGSC0003DMG400003630 Solanum tuberosum HOM05D005328 ORTHO05D006049 4.1e-19 99.8 73 68.5
CsaV3_4G004310 Cucumis sativus L. HOM05D005328 ORTHO05D006049 5.4e-19 99.4 329 35.9
PSO170G6444 Papaver somniferum HOM05D005328 ORTHO05D006049 2.7e-18 97.1 455 34.3
FvH4_4g13451 Fragaria vesca HOM05D005328 ORTHO05D006049 7.8e-18 95.5 137 52.6
FAN12G3626 Fragaria x ananassa HOM05D005328 ORTHO05D006049 7.8e-18 95.5 137 52.6
FAN22G2230 Fragaria x ananassa HOM05D005328 ORTHO05D006049 1.0e-17 95.1 131 54.2
Prupe.1G161500 Prunus persica HOM05D005328 ORTHO05D006049 1.7e-17 94.4 140 50.7
SEGI_06923 Sequoiadendron giganteum HOM05D005328 ORTHO05D006049 1.7e-17 94.4 522 26.8
DCAR_022839 Daucus carota HOM05D005328 ORTHO05D006049 2.3e-17 94.0 54 81.5
FAN17G2578 Fragaria x ananassa HOM05D005328 ORTHO05D006049 5.1e-17 92.8 475 32.4
AagrBONN_evm.TU.Sc2ySwM_228.5016 Anthoceros agrestis HOM05D005328 ORTHO05D006049 1.1e-16 91.7 60 71.7
GSVIVG01018754001 Vitis vinifera HOM05D005328 ORTHO05D006049 2.5e-16 90.5 475 30.1
FAN07G1972 Fragaria x ananassa HOM05D005328 ORTHO05D006049 4.3e-16 89.7 495 33.5
DCAR_022842 Daucus carota HOM05D005328 ORTHO05D006049 9.5e-16 88.6 180 43.9
TAR371G0561 Trochodendron aralioides HOM05D005328 ORTHO05D006049 2.1e-15 87.4 64 65.6
Zm00001eb097520 Zea mays HOM05D005328 ORTHO05D006049 4.7e-15 86.3 56 67.9
Pp3c3_9980 Physcomitrium patens HOM05D005328 ORTHO05D006049 6.2e-15 85.9 63 68.3
Prupe.1G162300 Prunus persica HOM05D005328 ORTHO05D006049 1.1e-14 85.1 101 53.5
SalBow8G1780 Salvia bowleyana HOM05D005328 ORTHO05D006049 1.1e-14 85.1 429 29.6
CDE06G0152 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 1.4e-14 84.7 151 44.4
Prupe.1G161200 Prunus persica HOM05D005328 ORTHO05D006049 5.2e-14 82.8 489 29.2
Zm00001eb034090 Zea mays HOM05D005328 ORTHO05D006049 8.9e-14 82.0 171 37.4
SMO117G0350 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 2.6e-13 80.5 299 38.5
Carub.0004s2678 Capsella rubella HOM05D005328 ORTHO05D006049 1.3e-12 78.2 443 27.5
Nn1g08402 Nelumbo nucifera HOM05D005328 ORTHO05D006049 3.2e-11 73.6 146 44.5
SMO117G0022 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 3.5e-10 70.1 116 42.2
Haze_07067 Corylus avellana HOM05D005328 ORTHO05D006049 5.6e-08 62.8 125 47.2
Mapoly0104s0032 Marchantia polymorpha HOM05D005328 ORTHO05D006049 7.3e-08 62.4 69 47.8
AT2G44195 Arabidopsis thaliana HOM05D005328 ORTHO05D006049 2.8e-07 60.5 41 68.3
CBR_g2953 Chara braunii HOM05D005328 ORTHO05D006049 1.1e-06 58.5 64 48.4
Carub.0004s2677 Capsella rubella HOM05D005328 ORTHO05D006049 1.8e-06 57.8 43 65.1
SMO117G0182 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 8.9e-06 55.5 112 37.5


User provided reference genes

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