Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0733G199 Amborella trichopoda HOM05D003885 ORTHO05D004623 1.2e-34 149.4 82 100.0
ATR1153G045 Amborella trichopoda HOM05D003885 ORTHO05D004623 3.8e-25 117.9 66 93.9
TAR629G2602 Trochodendron aralioides HOM05D003885 ORTHO05D004623 2.3e-22 108.6 74 83.8
CSS0008032 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 6.7e-22 107.1 74 81.1
CSS0014433 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 6.7e-22 107.1 74 81.1
TAR627G0008 Trochodendron aralioides HOM05D003885 ORTHO05D004623 8.7e-22 106.7 73 83.6
Haze_09860 Corylus avellana HOM05D003885 ORTHO05D004623 1.1e-21 106.3 75 80.0
Nn1g07757 Nelumbo nucifera HOM05D003885 ORTHO05D004623 1.1e-21 106.3 74 85.1
MBI11_g04749_MAGBIO Magnolia biondii HOM05D003885 ORTHO05D004623 1.5e-21 105.9 67 88.1
Ah.13g073470 Amaranthus hybridus HOM05D003885 ORTHO05D004623 4.3e-21 104.4 74 79.7
Ah.06g181560 Amaranthus hybridus HOM05D003885 ORTHO05D004623 7.4e-21 103.6 74 78.4
AUR62017134 Chenopodium quinoa HOM05D003885 ORTHO05D004623 7.4e-21 103.6 75 78.7
vmacro11612 Vaccinium macrocarpon HOM05D003885 ORTHO05D004623 7.4e-21 103.6 73 79.5
Hund01874 Selenicereus undatus HOM05D003885 ORTHO05D004623 9.6e-21 103.2 74 79.7
Hund01875 Selenicereus undatus HOM05D003885 ORTHO05D004623 9.6e-21 103.2 74 79.7
HPP92_015188 Vanilla planifolia HOM05D003885 ORTHO05D004623 1.6e-20 102.4 75 73.3
GSVIVG01014735001 Vitis vinifera HOM05D003885 ORTHO05D004623 2.1e-20 102.1 73 79.5
Cfa016929 Carpinus fangiana HOM05D003885 ORTHO05D004623 2.8e-20 101.7 75 77.3
Aa31LG8G410 Aethionema arabicum HOM05D003885 ORTHO05D004623 6.2e-20 100.5 75 74.7
Rhsim06G0232400 Rhododendron simsii HOM05D003885 ORTHO05D004623 8.1e-20 100.1 71 78.9
Actinidia30379 Actinidia chinensis HOM05D003885 ORTHO05D004623 1.8e-19 99.0 72 76.4
Sabra16G0243800 Salix brachista HOM05D003885 ORTHO05D004623 1.8e-19 99.0 75 76.0
Zm00001eb119790 Zea mays HOM05D003885 ORTHO05D004623 1.8e-19 99.0 75 74.7
AL3G24950 Arabidopsis lyrata HOM05D003885 ORTHO05D004623 2.4e-19 98.6 75 74.7
EL10Ac4g07536 Beta vulgaris HOM05D003885 ORTHO05D004623 2.4e-19 98.6 82 72.0
Thhalv10021450m.g Eutrema salsugineum HOM05D003885 ORTHO05D004623 2.4e-19 98.6 75 73.3
Duzib213G0370 Durio zibethinus HOM05D003885 ORTHO05D004623 3.1e-19 98.2 75 74.7
Sc03g0011570 Simmondsia chinensis HOM05D003885 ORTHO05D004623 4.0e-19 97.8 75 78.7
Atru.chr2.3832 Acer truncatum HOM05D003885 ORTHO05D004623 5.3e-19 97.4 73 75.3
Eucgr.F02030 Eucalyptus grandis HOM05D003885 ORTHO05D004623 6.9e-19 97.1 72 77.8
Hma1.2p1_0133F.1_g061250 Hydrangea macrophylla HOM05D003885 ORTHO05D004623 6.9e-19 97.1 74 74.3
Nn1g07559 Nelumbo nucifera HOM05D003885 ORTHO05D004623 6.9e-19 97.1 74 77.0
BcaB06g25479 Brassica carinata HOM05D003885 ORTHO05D004623 9.0e-19 96.7 75 72.0
A05p36370 Brassica napus HOM05D003885 ORTHO05D004623 9.0e-19 96.7 75 72.0
BraA05t22437Z Brassica rapa HOM05D003885 ORTHO05D004623 9.0e-19 96.7 75 72.0
CSS0021051 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 9.0e-19 96.7 78 73.1
AUR62035674 Chenopodium quinoa HOM05D003885 ORTHO05D004623 9.0e-19 96.7 77 72.7
Aqoxy3G02916 Aquilegia oxysepala HOM05D003885 ORTHO05D004623 1.2e-18 96.3 74 74.3
Carub.0003s1256 Capsella rubella HOM05D003885 ORTHO05D004623 1.2e-18 96.3 74 71.6
Gorai.013G150700 Gossypium raimondii HOM05D003885 ORTHO05D004623 1.2e-18 96.3 75 73.3
Sp3g11380 Schrenkiella parvula HOM05D003885 ORTHO05D004623 1.2e-18 96.3 74 73.0
Gohir.A13G131100 Gossypium hirsutum HOM05D003885 ORTHO05D004623 2.0e-18 95.5 75 73.3
Lalb_Chr16g0386671 Lupinus albus HOM05D003885 ORTHO05D004623 2.0e-18 95.5 74 73.0
CiPaw.12G140300 Carya illinoinensis HOM05D003885 ORTHO05D004623 2.6e-18 95.1 75 70.7
Ciclev10009386m.g Citrus clementina HOM05D003885 ORTHO05D004623 2.6e-18 95.1 75 73.3
Os06g0106100 Oryza sativa ssp. japonica HOM05D003885 ORTHO05D004623 2.6e-18 95.1 75 73.3
BcaB04g18746 Brassica carinata HOM05D003885 ORTHO05D004623 3.4e-18 94.7 74 73.0
A01p40350 Brassica napus HOM05D003885 ORTHO05D004623 3.4e-18 94.7 72 73.6
BraA01t04070Z Brassica rapa HOM05D003885 ORTHO05D004623 3.4e-18 94.7 72 73.6
Gohir.D13G134400 Gossypium hirsutum HOM05D003885 ORTHO05D004623 3.4e-18 94.7 75 72.0
FAN14G2004 Fragaria x ananassa HOM05D003885 ORTHO05D004623 4.5e-18 94.4 75 78.7
BcaC05g29203 Brassica carinata HOM05D003885 ORTHO05D004623 5.8e-18 94.0 73 72.6
C01p51880 Brassica napus HOM05D003885 ORTHO05D004623 5.8e-18 94.0 73 71.2
C05p54750 Brassica napus HOM05D003885 ORTHO05D004623 5.8e-18 94.0 73 72.6
BolC1t05136H Brassica oleracea HOM05D003885 ORTHO05D004623 5.8e-18 94.0 73 71.2
BolC5t34149H Brassica oleracea HOM05D003885 ORTHO05D004623 5.8e-18 94.0 73 72.6
Potri.001G370366 Populus trichocarpa HOM05D003885 ORTHO05D004623 5.8e-18 94.0 72 75.0
THA.LOC104822723 Tarenaya hassleriana HOM05D003885 ORTHO05D004623 5.8e-18 94.0 73 71.2
CSS0032461 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 7.6e-18 93.6 72 75.0
Lalb_Chr05g0221281 Lupinus albus HOM05D003885 ORTHO05D004623 7.6e-18 93.6 74 71.6
Actinidia10568 Actinidia chinensis HOM05D003885 ORTHO05D004623 1.3e-17 92.8 84 69.0
COL.COLO4_07729 Corchorus olitorius HOM05D003885 ORTHO05D004623 1.3e-17 92.8 75 70.7
AT3G13200 Arabidopsis thaliana HOM05D003885 ORTHO05D004623 1.7e-17 92.4 74 68.9
Dinv40883 Davidia involucrata HOM05D003885 ORTHO05D004623 1.7e-17 92.4 73 71.2
Zm00001eb338740 Zea mays HOM05D003885 ORTHO05D004623 2.2e-17 92.0 75 74.7
FAN09G2902 Fragaria x ananassa HOM05D003885 ORTHO05D004623 2.9e-17 91.7 71 81.7
QL08p003216 Quercus lobata HOM05D003885 ORTHO05D004623 2.9e-17 91.7 74 74.3
TWI39G1241 Tripterygium wilfordii HOM05D003885 ORTHO05D004623 2.9e-17 91.7 73 71.2
arahy.Tifrunner.gnm1.ann1.JC0UDE Arachis hypogaea HOM05D003885 ORTHO05D004623 3.8e-17 91.3 74 70.3
FAN05G2176 Fragaria x ananassa HOM05D003885 ORTHO05D004623 3.8e-17 91.3 71 80.3
A03p38080 Brassica napus HOM05D003885 ORTHO05D004623 4.9e-17 90.9 73 69.9
BraA03t12961Z Brassica rapa HOM05D003885 ORTHO05D004623 4.9e-17 90.9 73 69.9
FvH4_6g22570 Fragaria vesca HOM05D003885 ORTHO05D004623 4.9e-17 90.9 72 79.2
FAN14G0574 Fragaria x ananassa HOM05D003885 ORTHO05D004623 4.9e-17 90.9 72 79.2
CANSAT56G2895 Cannabis sativa HOM05D003885 ORTHO05D004623 6.5e-17 90.5 68 76.5
CAN.G492.53 Capsicum annuum HOM05D003885 ORTHO05D004623 6.5e-17 90.5 75 73.3
BolC3t16892H Brassica oleracea HOM05D003885 ORTHO05D004623 8.4e-17 90.1 73 69.9
THA.LOC104810295 Tarenaya hassleriana HOM05D003885 ORTHO05D004623 8.4e-17 90.1 74 68.9
Thecc.07G008300 Theobroma cacao HOM05D003885 ORTHO05D004623 8.4e-17 90.1 68 79.4
TWI38G2335 Tripterygium wilfordii HOM05D003885 ORTHO05D004623 8.4e-17 90.1 73 71.2
Lsat_1_v5_gn_5_188801 Lactuca sativa HOM05D003885 ORTHO05D004623 1.4e-16 89.4 72 69.4
Manes.03G143400 Manihot esculenta HOM05D003885 ORTHO05D004623 1.4e-16 89.4 73 69.9
THA.LOC104815689 Tarenaya hassleriana HOM05D003885 ORTHO05D004623 1.4e-16 89.4 77 70.1
CARHR087790 Cardamine hirsuta HOM05D003885 ORTHO05D004623 1.9e-16 89.0 75 66.7
Prupe.6G027200 Prunus persica HOM05D003885 ORTHO05D004623 1.9e-16 89.0 74 73.0
RcHm_v2.0_Chr3g0480061 Rosa chinensis HOM05D003885 ORTHO05D004623 1.9e-16 89.0 73 75.3
ClCG10G004480 Citrullus lanatus HOM05D003885 ORTHO05D004623 2.5e-16 88.6 74 71.6
Oeu039420.1 Olea europaea HOM05D003885 ORTHO05D004623 2.5e-16 88.6 73 74.0
CsaV3_3G004310 Cucumis sativus L. HOM05D003885 ORTHO05D004623 3.2e-16 88.2 74 70.3
Duzib170G0277 Durio zibethinus HOM05D003885 ORTHO05D004623 3.2e-16 88.2 75 68.0
MELO3C014122.2 Cucumis melo HOM05D003885 ORTHO05D004623 4.2e-16 87.8 74 70.3
Lsat_1_v5_gn_5_2000 Lactuca sativa HOM05D003885 ORTHO05D004623 7.1e-16 87.0 70 68.6
Psat0s1834g0040 Pisum sativum HOM05D003885 ORTHO05D004623 7.1e-16 87.0 75 66.7
SHI27704 Sapria himalayana HOM05D003885 ORTHO05D004623 9.3e-16 86.7 67 76.1
Sed0017804 Sechium edule HOM05D003885 ORTHO05D004623 9.3e-16 86.7 74 68.9
Lj4g0022976 Lotus japonicus HOM05D003885 ORTHO05D004623 1.2e-15 86.3 75 65.3
Medtr4g100970 Medicago truncatula HOM05D003885 ORTHO05D004623 1.2e-15 86.3 74 64.9
Sed0004751 Sechium edule HOM05D003885 ORTHO05D004623 1.2e-15 86.3 74 68.9
Nitab4.5_0005478g0040 Nicotiana tabacum HOM05D003885 ORTHO05D004623 1.6e-15 85.9 75 69.3
TPR.G2621 Trifolium pratense HOM05D003885 ORTHO05D004623 1.6e-15 85.9 75 64.0
TPR.G37597 Trifolium pratense HOM05D003885 ORTHO05D004623 1.6e-15 85.9 75 66.7
Solyc10g005800.3 Solanum lycopersicum HOM05D003885 ORTHO05D004623 2.1e-15 85.5 75 69.3
Sopen10g001770 Solanum pennellii HOM05D003885 ORTHO05D004623 2.1e-15 85.5 75 69.3
PGSC0003DMG400008684 Solanum tuberosum HOM05D003885 ORTHO05D004623 2.1e-15 85.5 75 69.3
Lj1g0011673 Lotus japonicus HOM05D003885 ORTHO05D004623 2.7e-15 85.1 75 65.3
Phvul.003G220300 Phaseolus vulgaris HOM05D003885 ORTHO05D004623 2.7e-15 85.1 75 66.7
MD11G1036400 Malus domestica HOM05D003885 ORTHO05D004623 3.5e-15 84.7 75 68.0
Glyma.17G141500 Glycine max HOM05D003885 ORTHO05D004623 6.0e-15 84.0 75 65.3
SGA_v2.0_scaffold8G04417 Striga asiatica HOM05D003885 ORTHO05D004623 7.9e-15 83.6 73 69.9
Ca_21964_v3 Cicer arietinum L. HOM05D003885 ORTHO05D004623 1.0e-14 83.2 73 65.8
VMungo0251G1810 Vigna mungo HOM05D003885 ORTHO05D004623 1.0e-14 83.2 75 66.7
MD03G1032500 Malus domestica HOM05D003885 ORTHO05D004623 1.3e-14 82.8 75 66.7
Glyma.05G059200 Glycine max HOM05D003885 ORTHO05D004623 2.3e-14 82.0 73 67.1
FAN02G3468 Fragaria x ananassa HOM05D003885 ORTHO05D004623 3.0e-14 81.6 66 78.8
Peaxi162Scf00139g01026 Petunia axillaris HOM05D003885 ORTHO05D004623 3.0e-14 81.6 74 68.9
RcHm_v2.0_Chr1g0318721 Rosa chinensis HOM05D003885 ORTHO05D004623 3.0e-14 81.6 76 68.4
PGR083G1050 Punica granatum HOM05D003885 ORTHO05D004623 3.9e-14 81.3 73 72.6
SalBow2G3065 Salvia bowleyana HOM05D003885 ORTHO05D004623 3.9e-14 81.3 73 67.1
DCAR_003369 Daucus carota HOM05D003885 ORTHO05D004623 5.1e-14 80.9 75 68.0
DCAR_019010 Daucus carota HOM05D003885 ORTHO05D004623 5.1e-14 80.9 75 68.0
MSTRG.14500 Avicennia marina HOM05D003885 ORTHO05D004623 8.7e-14 80.1 73 68.5
MSTRG.13030 Avicennia marina HOM05D003885 ORTHO05D004623 1.5e-13 79.3 74 66.2
Hma1.2p1_0193F.1_g083890 Hydrangea macrophylla HOM05D003885 ORTHO05D004623 1.9e-13 79.0 74 63.5
Lj1C893G21 Lonicera japonica HOM05D003885 ORTHO05D004623 1.9e-13 79.0 71 70.4
Cc05_g15250 Coffea canephora HOM05D003885 ORTHO05D004623 3.3e-13 78.2 72 66.7
Phvul.008G217400 Phaseolus vulgaris HOM05D003885 ORTHO05D004623 2.8e-12 75.1 76 56.6
SalBow2G0786 Salvia bowleyana HOM05D003885 ORTHO05D004623 8.2e-12 73.6 66 68.2
SalBow2G2704 Salvia bowleyana HOM05D003885 ORTHO05D004623 8.2e-12 73.6 66 68.2
SalBow2G2880 Salvia bowleyana HOM05D003885 ORTHO05D004623 8.2e-12 73.6 66 68.2
SalBow8G3434 Salvia bowleyana HOM05D003885 ORTHO05D004623 8.2e-12 73.6 66 68.2
Sopen07g033990 Solanum pennellii HOM05D003885 ORTHO05D004623 1.1e-11 73.2 65 69.2
SalBow2G0143 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.8e-11 72.4 66 66.7
Migut.M01631 Erythranthe guttata HOM05D003885 ORTHO05D004623 2.4e-11 72.0 65 70.8
PGSC0003DMG400022160 Solanum tuberosum HOM05D003885 ORTHO05D004623 3.1e-11 71.6 65 69.2
SalBow2G1425 Salvia bowleyana HOM05D003885 ORTHO05D004623 5.3e-11 70.9 66 66.7
CSS0035354 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 2.0e-10 68.9 73 57.5
SalBow2G3218 Salvia bowleyana HOM05D003885 ORTHO05D004623 2.0e-10 68.9 66 65.2
PSO210G1946 Papaver somniferum HOM05D003885 ORTHO05D004623 3.4e-10 68.2 66 60.6
PSO210G5551 Papaver somniferum HOM05D003885 ORTHO05D004623 4.5e-10 67.8 66 60.6
HanXRQChr08g0233271 Helianthus annuus HOM05D003885 ORTHO05D004623 5.8e-10 67.4 66 62.1
Pp3c5_15120 Physcomitrium patens HOM05D003885 ORTHO05D004623 1.3e-09 66.2 78 56.4
unitig_61.g26133 Utricularia gibba HOM05D003885 ORTHO05D004623 1.3e-09 66.2 76 57.9
ECA246G5298 Erigeron canadensis HOM05D003885 ORTHO05D004623 2.2e-09 65.5 71 59.2
unitig_0.g990 Utricularia gibba HOM05D003885 ORTHO05D004623 3.8e-09 64.7 74 60.8
HanXRQChr05g0160321 Helianthus annuus HOM05D003885 ORTHO05D004623 6.5e-09 63.9 64 59.4
Mapoly0072s0064 Marchantia polymorpha HOM05D003885 ORTHO05D004623 8.4e-09 63.5 65 55.4
C03p46210 Brassica napus HOM05D003885 ORTHO05D004623 2.5e-08 62.0 72 54.2
CSS0038981 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 9.3e-08 60.1 90 52.2
CSS0001317 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 6.1e-07 57.4 87 47.1
AagrBONN_evm.TU.Sc2ySwM_228.690 Anthoceros agrestis HOM05D003885 ORTHO05D004623 1.3e-06 56.2 70 48.6
Nitab4.5_0010643g0040 Nicotiana tabacum HOM05D003885 ORTHO05D004623 1.3e-06 56.2 74 55.4


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