Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0733G019 Amborella trichopoda HOM05D005873 ORTHO05D007582 0.0e+00 1418.7 697 100.0
Aqoxy4G00415 Aquilegia oxysepala HOM05D005873 ORTHO05D007582 5.2e-293 1010.7 698 70.6
Nn1g04384 Nelumbo nucifera HOM05D005873 ORTHO05D007582 8.9e-293 1010.0 699 69.5
TAR627G0247 Trochodendron aralioides HOM05D005873 ORTHO05D007582 2.0e-292 1008.8 701 70.8
Nn1g09089 Nelumbo nucifera HOM05D005873 ORTHO05D007582 6.4e-291 1003.8 697 70.2
CSS0049485 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 3.0e-288 995.0 699 69.2
CiPaw.10G058200 Carya illinoinensis HOM05D005873 ORTHO05D007582 1.9e-287 992.3 698 68.9
PSO541G6035 Papaver somniferum HOM05D005873 ORTHO05D007582 2.5e-287 991.9 711 68.6
GSVIVG01021202001 Vitis vinifera HOM05D005873 ORTHO05D007582 9.6e-287 989.9 696 69.3
Dinv04615 Davidia involucrata HOM05D005873 ORTHO05D007582 1.4e-285 986.1 697 69.4
PSO675G7532 Papaver somniferum HOM05D005873 ORTHO05D007582 4.0e-285 984.6 711 68.2
DCAR_028009 Daucus carota HOM05D005873 ORTHO05D007582 1.5e-284 982.6 698 68.9
Prupe.4G060100 Prunus persica HOM05D005873 ORTHO05D007582 5.8e-284 980.7 704 68.0
CSS0045323 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 6.4e-283 977.2 697 68.7
Duzib192G0329 Durio zibethinus HOM05D005873 ORTHO05D007582 3.2e-282 974.9 701 67.6
COL.COLO4_05490 Corchorus olitorius HOM05D005873 ORTHO05D007582 4.6e-281 971.1 697 67.1
Thecc.06G172000 Theobroma cacao HOM05D005873 ORTHO05D007582 6.0e-281 970.7 697 67.9
Ciclev10014429m.g Citrus clementina HOM05D005873 ORTHO05D007582 3.0e-280 968.4 699 67.7
CANSAT35G0525 Cannabis sativa HOM05D005873 ORTHO05D007582 5.1e-280 967.6 695 66.2
Cfa000601 Carpinus fangiana HOM05D005873 ORTHO05D007582 8.7e-280 966.8 692 67.9
Sed0012124 Sechium edule HOM05D005873 ORTHO05D007582 8.7e-280 966.8 690 66.8
Peaxi162Scf00010g03612 Petunia axillaris HOM05D005873 ORTHO05D007582 1.5e-279 966.1 699 68.0
Gohir.D05G158500 Gossypium hirsutum HOM05D005873 ORTHO05D007582 2.1e-278 962.2 695 66.8
TWI38G0673 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 4.8e-278 961.1 697 68.0
TWI63G0032 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 6.2e-278 960.7 693 68.3
Gorai.009G163500 Gossypium raimondii HOM05D005873 ORTHO05D007582 8.1e-278 960.3 695 66.6
MBI06_g25992_MAGBIO Magnolia biondii HOM05D005873 ORTHO05D007582 8.1e-278 960.3 707 68.0
RcHm_v2.0_Chr5g0010641 Rosa chinensis HOM05D005873 ORTHO05D007582 2.4e-277 958.7 697 67.0
Ca_21328_v3 Cicer arietinum L. HOM05D005873 ORTHO05D007582 3.1e-277 958.4 699 65.8
TPR.G8345 Trifolium pratense HOM05D005873 ORTHO05D007582 6.9e-277 957.2 705 65.8
ECA236G1606 Erigeron canadensis HOM05D005873 ORTHO05D007582 9.0e-277 956.8 703 66.3
Gohir.A05G155800 Gossypium hirsutum HOM05D005873 ORTHO05D007582 1.2e-276 956.4 695 66.5
arahy.Tifrunner.gnm1.ann1.IZWY79 Arachis hypogaea HOM05D005873 ORTHO05D007582 1.5e-276 956.1 694 65.6
Glyma.12G010000 Glycine max HOM05D005873 ORTHO05D007582 1.5e-276 956.1 688 66.4
Lalb_Chr03g0024111 Lupinus albus HOM05D005873 ORTHO05D007582 1.7e-275 952.6 697 65.3
MD10G1281000 Malus domestica HOM05D005873 ORTHO05D007582 2.2e-275 952.2 699 66.5
Lsat_1_v5_gn_7_23000 Lactuca sativa HOM05D005873 ORTHO05D007582 3.8e-275 951.4 701 66.6
Lj3g0011702 Lotus japonicus HOM05D005873 ORTHO05D007582 4.9e-275 951.0 704 65.3
Eucgr.B01514 Eucalyptus grandis HOM05D005873 ORTHO05D007582 6.4e-275 950.7 696 65.2
PGR004G0809 Punica granatum HOM05D005873 ORTHO05D007582 8.4e-275 950.3 689 66.9
ClCG01G023710 Citrullus lanatus HOM05D005873 ORTHO05D007582 1.1e-274 949.9 689 66.3
VMungo1127G0781 Vigna mungo HOM05D005873 ORTHO05D007582 1.1e-274 949.9 692 66.8
MSTRG.16147 Avicennia marina HOM05D005873 ORTHO05D007582 1.9e-274 949.1 709 65.7
MD05G1302300 Malus domestica HOM05D005873 ORTHO05D007582 1.9e-274 949.1 699 66.7
PGSC0003DMG400019634 Solanum tuberosum HOM05D005873 ORTHO05D007582 4.2e-274 948.0 699 66.7
Phvul.011G010700 Phaseolus vulgaris HOM05D005873 ORTHO05D007582 5.4e-274 947.6 694 65.7
Solyc11g068930.3 Solanum lycopersicum HOM05D005873 ORTHO05D007582 9.3e-274 946.8 697 66.6
Medtr0003s0540 Medicago truncatula HOM05D005873 ORTHO05D007582 1.0e-272 943.3 685 65.7
Sabra04G0036300 Salix brachista HOM05D005873 ORTHO05D007582 1.0e-272 943.3 694 66.4
SalBow8G4573 Salvia bowleyana HOM05D005873 ORTHO05D007582 1.0e-272 943.3 700 66.1
FAN21G0636 Fragaria x ananassa HOM05D005873 ORTHO05D007582 2.3e-272 942.2 703 65.6
Potri.004G055600 Populus trichocarpa HOM05D005873 ORTHO05D007582 5.1e-272 941.0 696 65.9
Sopen11g027640 Solanum pennellii HOM05D005873 ORTHO05D007582 1.1e-271 939.9 697 66.6
CAN.G689.28 Capsicum annuum HOM05D005873 ORTHO05D007582 1.5e-271 939.5 696 66.4
FAN11G2228 Fragaria x ananassa HOM05D005873 ORTHO05D007582 2.5e-271 938.7 703 65.7
FvH4_3g07910 Fragaria vesca HOM05D005873 ORTHO05D007582 3.3e-271 938.3 703 65.7
MELO3C007214.2 Cucumis melo HOM05D005873 ORTHO05D007582 7.4e-271 937.2 725 63.6
FAN16G2124 Fragaria x ananassa HOM05D005873 ORTHO05D007582 4.8e-270 934.5 703 65.4
Oeu039925.1 Olea europaea HOM05D005873 ORTHO05D007582 4.8e-270 934.5 699 64.8
QL05p046535 Quercus lobata HOM05D005873 ORTHO05D007582 6.2e-270 934.1 786 60.6
arahy.Tifrunner.gnm1.ann1.6H0VZY Arachis hypogaea HOM05D005873 ORTHO05D007582 1.8e-269 932.6 692 64.7
Lj1C1193T7 Lonicera japonica HOM05D005873 ORTHO05D007582 5.3e-269 931.0 697 65.9
Migut.M01045 Erythranthe guttata HOM05D005873 ORTHO05D007582 4.5e-268 927.9 699 63.9
CsaV3_6G050860 Cucumis sativus L. HOM05D005873 ORTHO05D007582 3.2e-266 921.8 689 64.6
Rhsim13G0191000 Rhododendron simsii HOM05D005873 ORTHO05D007582 1.6e-265 919.5 720 64.6
THA.LOC104806153 Tarenaya hassleriana HOM05D005873 ORTHO05D007582 1.6e-265 919.5 697 63.0
C02p46710 Brassica napus HOM05D005873 ORTHO05D007582 1.3e-264 916.4 690 64.2
SEGI_08778 Sequoiadendron giganteum HOM05D005873 ORTHO05D007582 1.8e-264 916.0 720 62.5
BraA02t07971Z Brassica rapa HOM05D005873 ORTHO05D007582 3.9e-264 914.8 690 64.3
Thhalv10000804m.g Eutrema salsugineum HOM05D005873 ORTHO05D007582 5.1e-264 914.4 686 64.4
BolC2t10723H Brassica oleracea HOM05D005873 ORTHO05D007582 8.7e-264 913.7 691 64.3
A02p29440 Brassica napus HOM05D005873 ORTHO05D007582 1.9e-263 912.5 690 64.3
Sp2g10820 Schrenkiella parvula HOM05D005873 ORTHO05D007582 1.9e-263 912.5 691 63.7
HanXRQChr13g0397371 Helianthus annuus HOM05D005873 ORTHO05D007582 7.4e-263 910.6 700 64.3
Aa31LG9G7130 Aethionema arabicum HOM05D005873 ORTHO05D007582 9.6e-263 910.2 696 63.6
AUR62036593 Chenopodium quinoa HOM05D005873 ORTHO05D007582 9.6e-263 910.2 684 64.5
AL8G12650 Arabidopsis lyrata HOM05D005873 ORTHO05D007582 3.7e-262 908.3 688 64.1
HanXRQChr05g0156521 Helianthus annuus HOM05D005873 ORTHO05D007582 4.0e-261 904.8 699 64.4
Nitab4.5_0003937g0030 Nicotiana tabacum HOM05D005873 ORTHO05D007582 5.3e-261 904.4 724 63.8
CARHR176060 Cardamine hirsuta HOM05D005873 ORTHO05D007582 9.0e-261 903.7 686 63.4
BcaC03g16799 Brassica carinata HOM05D005873 ORTHO05D007582 4.5e-260 901.4 691 63.8
AT5G45900 Arabidopsis thaliana HOM05D005873 ORTHO05D007582 1.9e-258 896.0 688 63.2
EL10Ac8g20512 Beta vulgaris HOM05D005873 ORTHO05D007582 1.6e-257 892.9 769 58.4
Nitab4.5_0000158g0030 Nicotiana tabacum HOM05D005873 ORTHO05D007582 5.7e-255 884.4 657 67.0
FAN25G0256 Fragaria x ananassa HOM05D005873 ORTHO05D007582 2.8e-254 882.1 716 61.7
Hund21181 Selenicereus undatus HOM05D005873 ORTHO05D007582 1.4e-253 879.8 750 59.5
Ah.14g087180 Amaranthus hybridus HOM05D005873 ORTHO05D007582 2.2e-251 872.5 691 61.5
Cc11_g13830 Coffea canephora HOM05D005873 ORTHO05D007582 6.3e-246 854.4 704 61.9
Sc17g0005780 Simmondsia chinensis HOM05D005873 ORTHO05D007582 5.0e-243 844.7 593 67.6
AUR62031177 Chenopodium quinoa HOM05D005873 ORTHO05D007582 4.6e-241 838.2 701 59.8
Carub.0008s0205 Capsella rubella HOM05D005873 ORTHO05D007582 3.4e-236 822.0 668 60.2
Psat7g197320 Pisum sativum HOM05D005873 ORTHO05D007582 3.4e-236 822.0 693 60.0
Atru.chr10.1680 Acer truncatum HOM05D005873 ORTHO05D007582 3.3e-231 805.4 581 68.3
Dinv40666 Davidia involucrata HOM05D005873 ORTHO05D007582 4.8e-230 801.6 553 69.8
AagrBONN_evm.TU.Sc2ySwM_117.2340 Anthoceros agrestis HOM05D005873 ORTHO05D007582 5.9e-228 794.7 684 55.7
vmacro01547 Vaccinium macrocarpon HOM05D005873 ORTHO05D007582 2.7e-220 769.2 709 56.8
SGA_v2.0_scaffold1G00037 Striga asiatica HOM05D005873 ORTHO05D007582 1.9e-218 763.1 702 57.0
Pp3c24_8100 Physcomitrium patens HOM05D005873 ORTHO05D007582 6.8e-216 754.6 690 54.3
Manes.17G054900 Manihot esculenta HOM05D005873 ORTHO05D007582 2.2e-214 749.6 538 68.2
SMO367G0884 Selaginella moellendorffii HOM05D005873 ORTHO05D007582 4.0e-200 702.2 692 50.9
Cpa.g.sc7.54 Carica papaya HOM05D005873 ORTHO05D007582 3.0e-195 686.0 514 65.4
CBR_g39927 Chara braunii HOM05D005873 ORTHO05D007582 1.5e-186 657.1 877 43.2
CSS0029481 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 2.1e-177 626.7 730 50.4
CBR_g50802 Chara braunii HOM05D005873 ORTHO05D007582 5.8e-175 618.6 841 42.9
Os01g0614900 Oryza sativa ssp. japonica HOM05D005873 ORTHO05D007582 4.9e-166 589.0 667 46.5
Mapoly0015s0071 Marchantia polymorpha HOM05D005873 ORTHO05D007582 5.6e-162 575.5 491 57.8
Eucgr.B01507 Eucalyptus grandis HOM05D005873 ORTHO05D007582 2.0e-159 567.0 438 63.0
MCO13G516 Micromonas commoda HOM05D005873 ORTHO05D007582 1.1e-152 544.7 738 42.5
Haze_06243 Corylus avellana HOM05D005873 ORTHO05D007582 4.6e-148 529.3 387 64.1
PRCOL_00005698 Prasinoderma coloniale HOM05D005873 ORTHO05D007582 6.7e-147 525.4 726 41.9
Haze_26854 Corylus avellana HOM05D005873 ORTHO05D007582 1.6e-137 494.2 715 39.6
Cfa025052 Carpinus fangiana HOM05D005873 ORTHO05D007582 2.4e-136 490.3 751 39.9
Cre03.g165215 Chlamydomonas reinhardtii HOM05D005873 ORTHO05D007582 6.5e-134 482.3 818 38.0
CDE08G0418 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 9.4e-109 398.7 302 68.9
Zm00001eb358160 Zea mays HOM05D005873 ORTHO05D007582 5.2e-107 392.9 352 58.5
Actinidia16800 Actinidia chinensis HOM05D005873 ORTHO05D007582 6.8e-99 365.9 330 60.0
CDE08G0836 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 5.6e-69 266.5 199 62.8
SHI28554 Sapria himalayana HOM05D005873 ORTHO05D007582 3.4e-66 257.3 268 49.6
unitig_0.g713 Utricularia gibba HOM05D005873 ORTHO05D007582 9.9e-58 229.2 187 63.1
CDE02G2814 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 6.6e-54 216.5 162 63.0
TPR.G23454 Trifolium pratense HOM05D001972 ORTHO05D002555 8.1e-52 209.5 132 75.0
SHI28555 Sapria himalayana HOM05D005873 ORTHO05D007582 7.4e-37 159.8 102 75.5
Psat0s133g0080 Pisum sativum HOM05D005873 ORTHO05D007582 2.2e-33 148.3 198 47.0
Haze_06244 Corylus avellana HOM05D005873 ORTHO05D007582 1.1e-32 146.0 103 73.8
SHI28562 Sapria himalayana HOM05D005873 ORTHO05D007582 9.6e-29 132.9 114 52.6
Potri.011G065402 Populus trichocarpa HOM05D005873 ORTHO05D007582 2.8e-28 131.3 99 67.7
SHI28558 Sapria himalayana HOM05D005873 ORTHO05D050808 2.1e-23 115.2 82 62.2
Sabra11G0047200 Salix brachista HOM05D005873 ORTHO05D007582 1.7e-17 95.5 61 72.1
Lsat_1_v5_gn_9_10320 Lactuca sativa HOM05D001670 ORTHO05D002980 3.0e-14 84.7 60 61.7
Lsat_1_v5_gn_1_96960 Lactuca sativa HOM05D001670 ORTHO05D002980 2.0e-13 82.0 80 50.0
Lsat_1_v5_gn_4_5981 Lactuca sativa HOM05D005873 ORTHO05D002980 2.8e-12 78.2 56 62.5
Oeu041773.1 Olea europaea HOM05D005873 ORTHO05D042378 3.4e-10 71.2 63 52.4
A06p46270 Brassica napus HOM05D005873 ORTHO05D042378 1.6e-07 62.4 50 52.0
Cpa.g.c47463 Carica papaya HOM05D005873 ORTHO05D007582 2.7e-07 61.6 38 65.8


User provided reference genes

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