Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0705G221 Amborella trichopoda HOM05D005962 ORTHO05D007325 2.1e-97 359.0 175 100.0
Dinv37956 Davidia involucrata HOM05D005962 ORTHO05D007325 1.3e-78 296.6 173 82.7
TAR623G1297 Trochodendron aralioides HOM05D005962 ORTHO05D007325 1.7e-78 296.2 167 85.6
MBI01_g35895_MAGBIO Magnolia biondii HOM05D005962 ORTHO05D007325 1.1e-77 293.5 167 84.4
Nn4g25123 Nelumbo nucifera HOM05D005962 ORTHO05D007325 6.9e-77 290.8 174 81.6
Hma1.2p1_0764F.1_g214960 Hydrangea macrophylla HOM05D005962 ORTHO05D007325 1.5e-76 289.7 173 82.1
Hma1.2p1_2308F.1_g319480 Hydrangea macrophylla HOM05D005962 ORTHO05D007325 1.5e-76 289.7 173 82.1
vmacro18833 Vaccinium macrocarpon HOM05D005962 ORTHO05D007325 1.3e-75 286.6 168 83.3
CsaV3_3G023410 Cucumis sativus L. HOM05D005962 ORTHO05D007325 2.2e-75 285.8 171 83.0
Rhsim08G0229500 Rhododendron simsii HOM05D005962 ORTHO05D007325 3.8e-75 285.0 168 82.7
Sed0025844 Sechium edule HOM05D005962 ORTHO05D007325 5.0e-75 284.6 176 81.2
ClCG07G013490 Citrullus lanatus HOM05D005962 ORTHO05D007325 8.5e-75 283.9 176 81.8
DCAR_007600 Daucus carota HOM05D005962 ORTHO05D007325 1.9e-74 282.7 168 82.1
Lsat_1_v5_gn_5_181040 Lactuca sativa HOM05D005962 ORTHO05D007325 2.5e-74 282.3 172 80.8
QL08p056642 Quercus lobata HOM05D005962 ORTHO05D007325 2.1e-73 279.3 160 83.1
Thecc.06G103400 Theobroma cacao HOM05D005962 ORTHO05D007325 2.7e-73 278.9 168 82.7
ECA248G1573 Erigeron canadensis HOM05D005962 ORTHO05D007325 6.1e-73 277.7 171 79.5
Manes.04G136400 Manihot esculenta HOM05D005962 ORTHO05D007325 1.4e-72 276.6 159 84.3
SGA_v2.0_scaffold45G16998 Striga asiatica HOM05D005962 ORTHO05D007325 1.4e-72 276.6 176 77.8
COL.COLO4_30547 Corchorus olitorius HOM05D005962 ORTHO05D007325 2.3e-72 275.8 170 81.8
Haze_15888 Corylus avellana HOM05D005962 ORTHO05D007325 3.0e-72 275.4 167 80.2
Cpa.g.sc131.1 Carica papaya HOM05D005962 ORTHO05D007325 3.9e-72 275.0 167 79.6
Manes.11G030300 Manihot esculenta HOM05D005962 ORTHO05D007325 3.9e-72 275.0 159 83.0
Actinidia32123 Actinidia chinensis HOM05D005962 ORTHO05D007325 5.1e-72 274.6 175 78.3
MELO3C013015.2 Cucumis melo HOM05D005962 ORTHO05D007325 5.1e-72 274.6 202 72.3
Peaxi162Scf00038g01151 Petunia axillaris HOM05D005962 ORTHO05D007325 8.8e-72 273.9 174 77.6
Prupe.3G054900 Prunus persica HOM05D005962 ORTHO05D007325 1.1e-71 273.5 171 77.8
Sopen12g023060 Solanum pennellii HOM05D005962 ORTHO05D007325 1.1e-71 273.5 152 85.5
VMungo0331G0822 Vigna mungo HOM05D005962 ORTHO05D007325 1.1e-71 273.5 155 82.6
Ciclev10026335m.g Citrus clementina HOM05D005962 ORTHO05D007325 1.5e-71 273.1 166 82.5
Gohir.D01G215700 Gossypium hirsutum HOM05D005962 ORTHO05D007325 1.5e-71 273.1 162 82.7
Rhsim08G0229700 Rhododendron simsii HOM05D005962 ORTHO05D007325 1.5e-71 273.1 181 76.2
TWI12G1051 Tripterygium wilfordii HOM05D005962 ORTHO05D007325 2.0e-71 272.7 168 78.0
Aqoxy2G04031 Aquilegia oxysepala HOM05D005962 ORTHO05D007325 2.6e-71 272.3 174 78.2
PGSC0003DMG400026839 Solanum tuberosum HOM05D005962 ORTHO05D007325 2.6e-71 272.3 172 79.1
Duzib192G0276 Durio zibethinus HOM05D005962 ORTHO05D007325 3.3e-71 271.9 160 82.5
Glyma.08G199200 Glycine max HOM05D005962 ORTHO05D007325 3.3e-71 271.9 163 79.8
Atru.chr12.732 Acer truncatum HOM05D005962 ORTHO05D007325 4.4e-71 271.6 155 84.5
CANSAT21G1984 Cannabis sativa HOM05D005962 ORTHO05D007325 5.7e-71 271.2 174 78.2
CiPaw.02G144100 Carya illinoinensis HOM05D005962 ORTHO05D007325 5.7e-71 271.2 166 81.3
Oeu024256.1 Olea europaea HOM05D005962 ORTHO05D007325 5.7e-71 271.2 177 77.4
Solyc12g044640.2 Solanum lycopersicum HOM05D005962 ORTHO05D007325 7.4e-71 270.8 152 84.9
Phvul.010G143300 Phaseolus vulgaris HOM05D005962 ORTHO05D007325 9.7e-71 270.4 161 79.5
Gorai.002G261900 Gossypium raimondii HOM05D005962 ORTHO05D007325 1.3e-70 270.0 162 82.1
Gorai.011G069400 Gossypium raimondii HOM05D005962 ORTHO05D007325 1.7e-70 269.6 148 85.1
Psat4g195960 Pisum sativum HOM05D005962 ORTHO05D007325 2.2e-70 269.2 163 78.5
Gohir.A10G063800 Gossypium hirsutum HOM05D005962 ORTHO05D007325 2.8e-70 268.9 168 80.4
Gohir.D10G065400 Gossypium hirsutum HOM05D005962 ORTHO05D007325 8.2e-70 267.3 168 80.4
Lj3g0005277 Lotus japonicus HOM05D005962 ORTHO05D007325 8.2e-70 267.3 155 81.3
RcHm_v2.0_Chr2g0141751 Rosa chinensis HOM05D005962 ORTHO05D007325 8.2e-70 267.3 159 78.6
arahy.Tifrunner.gnm1.ann1.M52QXX Arachis hypogaea HOM05D005962 ORTHO05D007325 1.1e-69 266.9 144 87.5
Sabra17G0126400 Salix brachista HOM05D005962 ORTHO05D007325 1.1e-69 266.9 174 77.0
Lalb_Chr01g0013231 Lupinus albus HOM05D005962 ORTHO05D007325 1.4e-69 266.5 172 76.7
Gohir.A01G226000 Gossypium hirsutum HOM05D005962 ORTHO05D007325 1.8e-69 266.2 141 88.7
CAN.G1143.30 Capsicum annuum HOM05D005962 ORTHO05D007325 3.1e-69 265.4 150 84.0
Cc00_g23930 Coffea canephora HOM05D005962 ORTHO05D007325 4.1e-69 265.0 172 77.9
PGSC0003DMG401002516 Solanum tuberosum HOM05D005962 ORTHO05D007325 4.1e-69 265.0 176 75.6
MSTRG.11013 Avicennia marina HOM05D005962 ORTHO05D007325 5.3e-69 264.6 174 77.0
EL10Ac3g07358 Beta vulgaris HOM05D005962 ORTHO05D007325 5.3e-69 264.6 170 77.6
CSS0027495 Camellia sinensis var. sinensis HOM05D005962 ORTHO05D007325 7.0e-69 264.2 136 91.2
GSVIVG01016927001 Vitis vinifera HOM05D005962 ORTHO05D007325 9.1e-69 263.8 136 91.2
FAN09G1055 Fragaria x ananassa HOM05D005962 ORTHO05D007325 1.2e-68 263.5 159 77.4
FvH4_6g32730 Fragaria vesca HOM05D005962 ORTHO05D007325 1.5e-68 263.1 159 77.4
unitig_32.g10986 Utricularia gibba HOM05D005962 ORTHO05D007325 1.5e-68 263.1 176 75.0
AUR62020986 Chenopodium quinoa HOM05D005962 ORTHO05D007325 2.0e-68 262.7 170 77.1
SalBow6G5073 Salvia bowleyana HOM05D005962 ORTHO05D007325 2.0e-68 262.7 139 87.1
Migut.I00971 Erythranthe guttata HOM05D005962 ORTHO05D007325 2.6e-68 262.3 171 76.0
Zm00001eb372970 Zea mays HOM05D005962 ORTHO05D007325 2.6e-68 262.3 166 77.1
Migut.O00801 Erythranthe guttata HOM05D005962 ORTHO05D007325 3.5e-68 261.9 171 76.0
FAN02G1749 Fragaria x ananassa HOM05D005962 ORTHO05D007325 3.5e-68 261.9 159 76.7
FAN05G1114 Fragaria x ananassa HOM05D005962 ORTHO05D007325 4.5e-68 261.5 159 76.7
arahy.Tifrunner.gnm1.ann1.FEFU12 Arachis hypogaea HOM05D005962 ORTHO05D007325 5.9e-68 261.2 169 78.1
Sc19g0007830 Simmondsia chinensis HOM05D005962 ORTHO05D007325 5.9e-68 261.2 167 77.8
Migut.I00969 Erythranthe guttata HOM05D005962 ORTHO05D007325 7.7e-68 260.8 171 75.4
Medtr8g015230 Medicago truncatula HOM05D005962 ORTHO05D007325 1.0e-67 260.4 145 84.8
Ah.04g150140 Amaranthus hybridus HOM05D005962 ORTHO05D007325 1.7e-67 259.6 171 76.6
Sopen03g040020 Solanum pennellii HOM05D005962 ORTHO05D007325 2.2e-67 259.2 176 75.0
AUR62018448 Chenopodium quinoa HOM05D005962 ORTHO05D007325 2.9e-67 258.8 170 76.5
Solyc03g121210.4 Solanum lycopersicum HOM05D005962 ORTHO05D007325 3.8e-67 258.5 176 74.4
HPP92_007682 Vanilla planifolia HOM05D005962 ORTHO05D007325 3.8e-67 258.5 166 74.1
PSO210G0258 Papaver somniferum HOM05D005962 ORTHO05D007325 5.0e-67 258.1 165 77.0
Os06g0217500 Oryza sativa ssp. japonica HOM05D005962 ORTHO05D007325 6.5e-67 257.7 167 74.9
PSO210G7608 Papaver somniferum HOM05D005962 ORTHO05D007325 6.5e-67 257.7 167 76.0
Eucgr.J02602 Eucalyptus grandis HOM05D005962 ORTHO05D007325 1.5e-66 256.5 167 76.6
Nitab4.5_0002423g0030 Nicotiana tabacum HOM05D005962 ORTHO05D007325 2.5e-66 255.8 174 74.7
Nitab4.5_0001172g0180 Nicotiana tabacum HOM05D005962 ORTHO05D007325 1.2e-65 253.4 180 73.3
Ca_23283_v3 Cicer arietinum L. HOM05D005962 ORTHO05D007325 1.4e-64 250.0 158 77.8
Aa31LG8G8050 Aethionema arabicum HOM05D005962 ORTHO05D007325 1.8e-64 249.6 139 83.5
PGR102G2175 Punica granatum HOM05D005962 ORTHO05D007325 5.2e-64 248.1 157 75.2
THA.LOC104805924 Tarenaya hassleriana HOM05D005962 ORTHO05D007325 5.7e-63 244.6 161 74.5
AL3G35400 Arabidopsis lyrata HOM05D005962 ORTHO05D007325 2.2e-62 242.7 152 75.7
SHI11207 Sapria himalayana HOM05D005962 ORTHO05D007325 2.8e-62 242.3 168 73.8
AT3G21350 Arabidopsis thaliana HOM05D005962 ORTHO05D007325 3.7e-62 241.9 152 76.3
BcaB06g26231 Brassica carinata HOM05D005962 ORTHO05D007325 4.8e-62 241.5 159 73.6
Sp3g19410 Schrenkiella parvula HOM05D005962 ORTHO05D007325 1.1e-61 240.4 148 76.4
BraA05t21615Z Brassica rapa HOM05D005962 ORTHO05D007325 1.8e-61 239.6 158 72.8
A05p27250 Brassica napus HOM05D005962 ORTHO05D007325 5.3e-61 238.0 164 70.1
BcaC05g28175 Brassica carinata HOM05D005962 ORTHO05D007325 9.1e-61 237.3 158 72.2
C05p42110 Brassica napus HOM05D005962 ORTHO05D007325 9.1e-61 237.3 158 72.2
BolC5t32941H Brassica oleracea HOM05D005962 ORTHO05D007325 9.1e-61 237.3 158 72.2
CARHR097270 Cardamine hirsuta HOM05D005962 ORTHO05D007325 2.0e-60 236.1 164 70.1
Carub.0003s2138 Capsella rubella HOM05D005962 ORTHO05D007325 2.6e-60 235.7 152 73.7
Thhalv10021373m.g Eutrema salsugineum HOM05D005962 ORTHO05D007325 7.7e-60 234.2 148 75.7
HanXRQChr15g0489361 Helianthus annuus HOM05D005962 ORTHO05D007325 1.7e-59 233.0 165 73.9
AagrBONN_evm.TU.Sc2ySwM_362.1658 Anthoceros agrestis HOM05D005962 ORTHO05D007325 3.2e-58 228.8 142 73.9
Mapoly0012s0176 Marchantia polymorpha HOM05D005962 ORTHO05D007325 7.2e-58 227.6 156 70.5
Pp3c11_22580 Physcomitrium patens HOM05D005962 ORTHO05D007325 4.0e-56 221.9 145 70.3
SMO143G0120 Selaginella moellendorffii HOM05D005962 ORTHO05D007325 1.8e-53 213.0 147 67.3
CBR_g22489 Chara braunii HOM05D005962 ORTHO05D007325 8.9e-40 167.5 164 53.0
TPR.G39766 Trifolium pratense HOM05D005962 ORTHO05D007325 4.9e-38 161.8 98 79.6
MD14G1079700 Malus domestica HOM05D005962 ORTHO05D007325 1.6e-33 146.7 88 79.5
Lj5C50T14 Lonicera japonica HOM05D005962 ORTHO05D007325 2.8e-33 146.0 88 78.4
Cfa019373 Carpinus fangiana HOM05D005962 ORTHO05D007325 1.4e-32 143.7 87 81.6
SEGI_18792 Sequoiadendron giganteum HOM05D005962 ORTHO05D007325 5.2e-32 141.7 80 82.5
Lj5A50T68 Lonicera japonica HOM05D005962 ORTHO05D007325 1.2e-31 140.6 80 83.8
Medtr0361s0030 Medicago truncatula HOM05D005962 ORTHO05D007325 4.4e-31 138.7 85 78.8
QL05p018100 Quercus lobata HOM05D005962 ORTHO05D007325 2.7e-28 129.4 69 89.9
Cfa019374 Carpinus fangiana HOM05D005962 ORTHO05D007325 1.6e-25 120.2 77 76.6
Lsat_1_v5_gn_2_99820 Lactuca sativa HOM05D005962 ORTHO05D007325 4.7e-25 118.6 88 70.5
Dinv30416 Davidia involucrata HOM05D005962 ORTHO05D007325 1.8e-24 116.7 76 73.7
RcHm_v2.0_Chr5g0064381 Rosa chinensis HOM05D005962 ORTHO05D007325 4.9e-22 108.6 80 62.5
Lj3g0016976 Lotus japonicus HOM05D005962 ORTHO05D007325 4.1e-21 105.5 147 46.9
TAR623G1541 Trochodendron aralioides HOM05D005962 ORTHO05D007325 1.2e-20 104.0 59 86.4
Zm00001eb084330 Zea mays HOM05D005962 ORTHO05D007325 8.9e-16 87.8 63 68.3
Zm00001eb192830 Zea mays HOM05D005962 ORTHO05D007325 4.4e-15 85.5 63 65.1
TAR636G3265 Trochodendron aralioides HOM05D005962 ORTHO05D007325 3.7e-14 82.4 60 68.3
Nitab4.5_0008212g0010 Nicotiana tabacum HOM05D005962 ORTHO05D007325 4.6e-12 75.5 67 56.7
Pp3c7_2870 Physcomitrium patens HOM05D005962 ORTHO05D007325 3.0e-11 72.8 141 36.2
BraA09t39590Z Brassica rapa HOM05D002393 ORTHO05D002845 8.4e-06 54.7 49 59.2


User provided reference genes

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