Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0705G117 Amborella trichopoda HOM05D003995 ORTHO05D004800 0.0e+00 1359.0 706 100.0
TAR624G1104 Trochodendron aralioides HOM05D003995 ORTHO05D004800 5.6e-218 761.5 730 60.0
MBI04_g27074_MAGBIO Magnolia biondii HOM05D003266 ORTHO05D003718 1.8e-200 703.4 735 56.5
Aqoxy7G01498 Aquilegia oxysepala HOM05D003995 ORTHO05D004800 6.9e-200 701.4 723 57.0
GSVIVG01017039001 Vitis vinifera HOM05D003995 ORTHO05D004800 1.2e-199 700.7 729 57.1
CiPaw.02G147500 Carya illinoinensis HOM05D003995 ORTHO05D004800 5.4e-197 691.8 728 56.5
Thecc.06G096000 Theobroma cacao HOM05D003995 ORTHO05D004800 5.1e-195 685.3 732 56.1
TAR102G0002 Trochodendron aralioides HOM05D003995 ORTHO05D004800 5.1e-195 685.3 731 56.0
PSO210G6397 Papaver somniferum HOM05D003995 ORTHO05D004800 7.4e-194 681.4 728 55.6
PSO210G6330 Papaver somniferum HOM05D003995 ORTHO05D004800 2.1e-193 679.9 730 55.6
COL.COLO4_30474 Corchorus olitorius HOM05D003995 ORTHO05D004800 3.1e-192 676.0 724 56.5
QL05p021104 Quercus lobata HOM05D003995 ORTHO05D004800 6.9e-192 674.9 730 56.2
Hma1.2p1_1689F.1_g297670 Hydrangea macrophylla HOM05D003995 ORTHO05D004800 4.5e-191 672.2 727 56.0
Gohir.D05G132500 Gossypium hirsutum HOM05D003995 ORTHO05D004800 7.6e-191 671.4 730 55.6
Gorai.009G136200 Gossypium raimondii HOM05D003995 ORTHO05D004800 1.0e-190 671.0 730 55.8
Cfa002115 Carpinus fangiana HOM05D003995 ORTHO05D004800 1.7e-190 670.2 729 56.5
Potri.001G187000 Populus trichocarpa HOM05D003995 ORTHO05D004800 4.9e-190 668.7 724 54.3
Gohir.A05G128000 Gossypium hirsutum HOM05D003995 ORTHO05D004800 1.4e-189 667.2 729 54.9
Manes.04G131700 Manihot esculenta HOM05D003995 ORTHO05D004800 3.2e-189 666.0 726 53.3
Prupe.3G063200 Prunus persica HOM05D003995 ORTHO05D004800 3.2e-189 666.0 725 55.2
TWI75G1811 Tripterygium wilfordii HOM05D003995 ORTHO05D004800 7.1e-189 664.8 723 55.7
Actinidia21699 Actinidia chinensis HOM05D003995 ORTHO05D004800 1.6e-188 663.7 731 55.4
VMungo0331G0049 Vigna mungo HOM05D003995 ORTHO05D004800 1.6e-188 663.7 725 55.3
FvH4_6g32000 Fragaria vesca HOM05D003995 ORTHO05D004800 7.9e-188 661.4 724 54.6
arahy.Tifrunner.gnm1.ann1.8U94IH Arachis hypogaea HOM05D003995 ORTHO05D004800 1.0e-187 661.0 732 54.6
CANSAT56G4226 Cannabis sativa HOM05D003995 ORTHO05D004800 3.9e-187 659.1 727 54.1
CiPaw.01G233700 Carya illinoinensis HOM05D003995 ORTHO05D004800 3.9e-187 659.1 726 53.9
MD09G1207100 Malus domestica HOM05D003995 ORTHO05D004800 6.7e-187 658.3 725 55.0
Haze_16334 Corylus avellana HOM05D003995 ORTHO05D004800 1.9e-186 656.8 745 54.9
Lj3g0012728 Lotus japonicus HOM05D003995 ORTHO05D004800 2.5e-186 656.4 721 55.2
TWI12G0239 Tripterygium wilfordii HOM05D003995 ORTHO05D004800 2.5e-186 656.4 726 55.1
Manes.11G036200 Manihot esculenta HOM05D003995 ORTHO05D004800 7.4e-186 654.8 746 52.4
Dinv30461 Davidia involucrata HOM05D003995 ORTHO05D004800 1.3e-185 654.1 728 55.1
TWI18G0079 Tripterygium wilfordii HOM05D003995 ORTHO05D004800 2.8e-185 652.9 725 55.3
CSS0042187 Camellia sinensis var. sinensis HOM05D003995 ORTHO05D004800 1.1e-184 651.0 729 54.5
Phvul.010G147000 Phaseolus vulgaris HOM05D003995 ORTHO05D004800 1.1e-184 651.0 730 54.2
CSS0043166 Camellia sinensis var. sinensis HOM05D003995 ORTHO05D004800 1.4e-184 650.6 730 54.2
Hma1.2p1_0659F.1_g197350 Hydrangea macrophylla HOM05D003995 ORTHO05D004800 1.8e-184 650.2 726 55.2
Glyma.07G017700 Glycine max HOM05D003995 ORTHO05D004800 5.8e-183 645.2 731 53.9
Gohir.A02G119100 Gossypium hirsutum HOM05D003995 ORTHO05D004800 7.6e-183 644.8 729 53.9
FAN05G2434 Fragaria x ananassa HOM05D003995 ORTHO05D004800 1.3e-182 644.0 742 53.5
Gohir.D03G059900 Gossypium hirsutum HOM05D003995 ORTHO05D004800 2.9e-182 642.9 729 54.5
MD17G1187800 Malus domestica HOM05D003995 ORTHO05D004800 8.4e-182 641.3 735 53.3
Hund06648 Selenicereus undatus HOM05D003995 ORTHO05D004800 5.5e-181 638.6 730 54.1
Lalb_Chr25g0280081 Lupinus albus HOM05D003995 ORTHO05D004800 7.1e-181 638.3 729 54.5
CDE08G1118 Ceratophyllum demersum HOM05D003995 ORTHO05D004800 2.7e-180 636.3 714 52.5
Lalb_Chr01g0013091 Lupinus albus HOM05D003995 ORTHO05D004800 3.5e-180 636.0 725 53.7
Ca_11524_v3 Cicer arietinum L. HOM05D003995 ORTHO05D004800 1.5e-178 630.6 728 53.8
FAN14G0476 Fragaria x ananassa HOM05D003995 ORTHO05D004800 4.3e-178 629.0 724 52.9
Duzib235G0154 Durio zibethinus HOM05D003995 ORTHO05D004800 7.4e-178 628.2 713 54.0
Gorai.003G063800 Gossypium raimondii HOM05D003995 ORTHO05D004800 9.7e-178 627.9 721 53.8
Peaxi162Scf00090g00073 Petunia axillaris HOM05D003995 ORTHO05D004800 9.7e-178 627.9 729 54.0
Dinv38000 Davidia involucrata HOM05D003995 ORTHO05D004800 6.3e-177 625.2 710 53.9
TPR.G14825 Trifolium pratense HOM05D003995 ORTHO05D004800 8.2e-177 624.8 733 53.1
CDE02G3541 Ceratophyllum demersum HOM05D003995 ORTHO05D004800 2.4e-176 623.2 712 52.2
Cpa.g.sc109.33 Carica papaya HOM05D003995 ORTHO05D004800 3.1e-176 622.9 714 53.2
Medtr8g013720 Medicago truncatula HOM05D003995 ORTHO05D004800 9.0e-176 621.3 737 52.2
Ciclev10027380m.g Citrus clementina HOM05D003995 ORTHO05D004800 1.2e-175 620.9 749 52.1
Atru.chr1.3467 Acer truncatum HOM05D003995 ORTHO05D004800 2.0e-175 620.2 718 54.2
Nitab4.5_0002549g0020 Nicotiana tabacum HOM05D003995 ORTHO05D004800 1.7e-174 617.1 729 52.4
Eucgr.F03056 Eucalyptus grandis HOM05D003995 ORTHO05D004800 3.8e-174 615.9 721 52.8
Sc12g0009570 Simmondsia chinensis HOM05D003995 ORTHO05D004800 6.5e-174 615.1 731 52.3
CAN.G60.5 Capsicum annuum HOM05D003995 ORTHO05D004800 1.1e-173 614.4 728 52.3
Psat4g198440 Pisum sativum HOM05D003995 ORTHO05D004800 1.1e-173 614.4 735 52.4
Cc00_g10390 Coffea canephora HOM05D003995 ORTHO05D004800 1.9e-173 613.6 728 51.9
Aa31LG8G3420 Aethionema arabicum HOM05D003995 ORTHO05D004800 7.2e-173 611.7 729 53.6
AL3G29010 Arabidopsis lyrata HOM05D003995 ORTHO05D004800 1.6e-172 610.5 731 53.1
PGR102G1422 Punica granatum HOM05D003995 ORTHO05D004800 6.1e-172 608.6 728 51.9
Sed0011470 Sechium edule HOM05D003995 ORTHO05D004800 1.8e-171 607.1 730 51.9
Oeu017626.1 Olea europaea HOM05D003995 ORTHO05D004800 2.3e-171 606.7 727 52.3
THA.LOC104817968 Tarenaya hassleriana HOM05D003995 ORTHO05D004800 3.0e-171 606.3 724 51.8
AUR62031875 Chenopodium quinoa HOM05D003995 ORTHO05D004800 3.9e-171 605.9 729 51.7
FAN02G0974 Fragaria x ananassa HOM05D003995 ORTHO05D004800 3.9e-171 605.9 727 51.6
CARHR091480 Cardamine hirsuta HOM05D003995 ORTHO05D004800 3.3e-170 602.8 729 52.4
AT3G16270 Arabidopsis thaliana HOM05D003995 ORTHO05D004800 4.3e-170 602.4 731 52.7
CsaV3_3G023750 Cucumis sativus L. HOM05D003995 ORTHO05D004800 9.7e-170 601.3 733 51.3
Migut.H00960 Erythranthe guttata HOM05D003995 ORTHO05D004800 9.7e-170 601.3 727 51.0
Gorai.010G229800 Gossypium raimondii HOM05D003995 ORTHO05D004800 9.7e-170 601.3 722 50.7
Sp3g14640 Schrenkiella parvula HOM05D003995 ORTHO05D004800 9.7e-170 601.3 724 51.9
Oeu050081.1 Olea europaea HOM05D003995 ORTHO05D004800 4.8e-169 599.0 722 51.7
PGR102G1287 Punica granatum HOM05D003995 ORTHO05D004800 4.8e-169 599.0 723 51.9
PGSC0003DMG400008535 Solanum tuberosum HOM05D003995 ORTHO05D004800 4.8e-169 599.0 735 52.1
EL10Ac9g22110 Beta vulgaris HOM05D003995 ORTHO05D004800 6.3e-169 598.6 731 51.6
FAN09G2208 Fragaria x ananassa HOM05D003995 ORTHO05D004800 6.3e-169 598.6 721 51.6
Thhalv10020187m.g Eutrema salsugineum HOM05D003995 ORTHO05D004800 1.4e-168 597.4 729 51.3
Carub.0003s1602 Capsella rubella HOM05D003995 ORTHO05D004800 1.8e-168 597.0 727 52.4
BcaB06g25717 Brassica carinata HOM05D003995 ORTHO05D004800 6.9e-168 595.1 729 51.9
C05p50240 Brassica napus HOM05D003995 ORTHO05D004800 2.6e-167 593.2 727 51.6
THA.LOC104810534 Tarenaya hassleriana HOM05D003995 ORTHO05D004800 2.6e-167 593.2 725 51.2
BraA05t22150Z Brassica rapa HOM05D003995 ORTHO05D004800 5.9e-167 592.0 729 52.3
BcaC05g28900 Brassica carinata HOM05D003995 ORTHO05D004800 1.0e-166 591.3 728 51.9
BolC5t33775H Brassica oleracea HOM05D003995 ORTHO05D004800 1.0e-166 591.3 728 51.9
Gohir.D06G197450 Gossypium hirsutum HOM05D003995 ORTHO05D004800 1.3e-166 590.9 726 50.4
Lsat_1_v5_gn_2_39201 Lactuca sativa HOM05D003995 ORTHO05D004800 2.2e-166 590.1 719 51.5
A05p33250 Brassica napus HOM05D003995 ORTHO05D004800 1.1e-165 587.8 728 51.5
MSTRG.23509 Avicennia marina HOM05D003995 ORTHO05D004800 1.4e-165 587.4 732 49.3
Glyma.08G202900 Glycine max HOM05D003995 ORTHO05D004800 1.6e-164 583.9 734 50.3
SGA_v2.0_scaffold44G16540 Striga asiatica HOM05D003995 ORTHO05D004800 2.7e-164 583.2 740 50.0
Nn2g11632 Nelumbo nucifera HOM05D003995 ORTHO05D004800 1.4e-163 580.9 727 50.3
CSS0032416 Camellia sinensis var. sinensis HOM05D003995 ORTHO05D004800 2.3e-163 580.1 722 50.3
AUR62022169 Chenopodium quinoa HOM05D003995 ORTHO05D004800 5.1e-163 578.9 727 50.3
Sed0003559 Sechium edule HOM05D003995 ORTHO05D004800 6.7e-163 578.6 737 50.3
DCAR_019957 Daucus carota HOM05D003995 ORTHO05D004800 4.4e-162 575.9 725 49.1
Rhsim08G0225700 Rhododendron simsii HOM05D003995 ORTHO05D004800 4.4e-162 575.9 732 50.3
Solyc04g047770.3 Solanum lycopersicum HOM05D003995 ORTHO05D004800 5.3e-160 568.9 730 50.4
SEGI_23305 Sequoiadendron giganteum HOM05D003995 ORTHO05D004800 1.5e-159 567.4 734 48.2
Sopen04g017970 Solanum pennellii HOM05D003995 ORTHO05D004800 2.6e-159 566.6 730 49.7
HanXRQChr14g0434431 Helianthus annuus HOM05D003995 ORTHO05D004800 4.5e-159 565.8 728 51.0
Eucgr.J02949 Eucalyptus grandis HOM05D003995 ORTHO05D004800 1.5e-157 560.8 729 49.2
HanXRQChr01g0017801 Helianthus annuus HOM05D003995 ORTHO05D004800 4.7e-156 555.8 727 48.4
Nitab4.5_0004354g0010 Nicotiana tabacum HOM05D003995 ORTHO05D004800 4.7e-156 555.8 890 43.4
Glyma.13G355800 Glycine max HOM05D003995 ORTHO05D004800 1.0e-155 554.7 721 49.4
Zm00001eb339300 Zea mays HOM05D003995 ORTHO05D004800 1.5e-154 550.8 731 48.0
Ah.01g021840 Amaranthus hybridus HOM05D003995 ORTHO05D004800 2.0e-154 550.4 719 49.5
Os01g0232400 Oryza sativa ssp. japonica HOM05D003995 ORTHO05D004800 4.4e-154 549.3 726 47.9
Ah.01g005620 Amaranthus hybridus HOM05D003995 ORTHO05D004800 1.6e-151 540.8 736 48.1
Zm00001eb119170 Zea mays HOM05D003995 ORTHO05D004800 5.0e-150 535.8 728 47.4
SHI11063 Sapria himalayana HOM05D003995 ORTHO05D004800 1.3e-145 521.2 706 48.0
HPP92_008092 Vanilla planifolia HOM05D003995 ORTHO05D004800 5.4e-144 515.8 742 46.1
Nn3g18163 Nelumbo nucifera HOM05D003995 ORTHO05D004800 3.8e-142 509.6 378 70.6
VMungo1080G0563 Vigna mungo HOM05D003995 ORTHO05D004800 3.2e-141 506.5 713 46.7
ECA248G2833 Erigeron canadensis HOM05D003995 ORTHO05D004800 3.6e-140 503.1 719 47.1
MELO3C012986.2 Cucumis melo HOM05D003995 ORTHO05D004800 5.2e-139 499.2 664 48.6
Phvul.005G170500 Phaseolus vulgaris HOM05D003995 ORTHO05D004800 2.0e-138 497.3 725 45.4
SalBow1G2060 Salvia bowleyana HOM05D003995 ORTHO05D004800 2.6e-138 496.9 762 44.5
MBI01_g24453_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 2.8e-132 476.9 707 46.1
Gohir.A06G188875 Gossypium hirsutum HOM05D003995 ORTHO05D004800 4.9e-121 439.5 391 61.9
SalBow1G1048 Salvia bowleyana HOM05D003995 ORTHO05D004800 4.9e-121 439.5 376 62.8
SalBow1G5856 Salvia bowleyana HOM05D003995 ORTHO05D004800 4.9e-121 439.5 376 62.8
Mapoly0022s0096 Marchantia polymorpha HOM05D003995 ORTHO05D004800 1.2e-119 434.9 753 40.8
vmacro18871 Vaccinium macrocarpon HOM05D003995 ORTHO05D004800 1.2e-119 434.9 321 71.3
RcHm_v2.0_Chr2g0139591 Rosa chinensis HOM05D003995 ORTHO05D004800 1.7e-113 414.5 318 70.1
AagrBONN_evm.TU.Sc2ySwM_362.567 Anthoceros agrestis HOM05D003995 ORTHO05D004800 5.6e-101 372.9 786 37.0
SMO340G0180 Selaginella moellendorffii HOM05D003995 ORTHO05D004800 7.3e-101 372.5 731 38.7
MBI01_g39826_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 1.3e-94 351.7 631 41.0
Pp3c2_17390 Physcomitrium patens HOM05D003995 ORTHO05D004800 1.9e-93 347.8 744 37.5
QL04p048641 Quercus lobata HOM05D003995 ORTHO05D004800 3.4e-90 337.0 625 41.0
Lj4A820G41 Lonicera japonica HOM05D003995 ORTHO05D004800 1.3e-89 335.1 563 43.5
Hund00665 Selenicereus undatus HOM05D003995 ORTHO05D004800 2.8e-68 264.2 491 38.9
Sabra01G0153300 Salix brachista HOM05D003995 ORTHO05D004800 2.9e-65 254.2 409 43.8
RcHm_v2.0_Chr2g0139601 Rosa chinensis HOM05D003995 ORTHO05D004800 3.0e-62 244.2 418 40.9
Actinidia39150 Actinidia chinensis HOM05D003995 ORTHO05D004800 5.1e-62 243.4 413 42.6
CBR_g36315 Chara braunii HOM05D003995 ORTHO05D004800 1.5e-61 241.9 888 28.5
arahy.Tifrunner.gnm1.ann1.QE1TJP Arachis hypogaea HOM05D003995 ORTHO05D004800 1.3e-57 228.8 410 40.7
CBR_g31940 Chara braunii HOM05D003995 ORTHO05D004800 3.8e-57 227.3 601 32.9
Actinidia32710 Actinidia chinensis HOM05D003995 ORTHO05D004800 2.2e-49 201.4 150 68.7
CBR_g25753 Chara braunii HOM05D003995 ORTHO05D004800 1.8e-38 165.2 244 41.4
HanXRQChr10g0310971 Helianthus annuus HOM05D003995 ORTHO05D004800 2.3e-38 164.9 185 55.7
CDE02G4060 Ceratophyllum demersum HOM05D003995 ORTHO05D004800 1.1e-37 162.5 229 41.9
Actinidia09000 Actinidia chinensis HOM05D003995 ORTHO05D004800 2.0e-37 161.8 161 56.5
ClCG07G013220 Citrullus lanatus HOM05D003995 ORTHO05D004800 1.4e-30 139.0 361 34.6
vmacro18870 Vaccinium macrocarpon HOM05D003995 ORTHO05D004800 3.0e-30 137.9 364 33.5
Actinidia32709 Actinidia chinensis HOM05D003995 ORTHO05D004800 1.0e-25 122.9 349 34.4
Cre12.g545300 Chlamydomonas reinhardtii HOM05D003995 ORTHO05D004800 9.5e-24 116.3 417 26.1
Lj4C820T9 Lonicera japonica HOM05D003995 ORTHO05D004800 9.5e-24 116.3 69 81.2
Glyma.15G018300 Glycine max HOM05D003995 ORTHO05D004800 1.0e-22 112.8 251 36.7
FAN18G0014 Fragaria x ananassa HOM05D003995 ORTHO05D004800 5.2e-22 110.5 69 75.4
Cre12.g545150 Chlamydomonas reinhardtii HOM05D003995 ORTHO05D004800 8.8e-22 109.8 376 27.7
SEGI_12342 Sequoiadendron giganteum HOM05D003995 ORTHO05D004800 6.3e-20 103.6 80 56.2
PRCOL_00002233 Prasinoderma coloniale HOM05D003995 ORTHO05D004800 4.1e-19 100.9 519 26.0
Lsat_1_v5_gn_7_27180 Lactuca sativa HOM05D003995 ORTHO05D004605 1.0e-17 96.3 62 79.0
Actinidia08998 Actinidia chinensis HOM05D003995 ORTHO05D004800 8.6e-17 93.2 57 78.9
MBI07_g11499_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 1.1e-16 92.8 62 71.0
FvH4_5g23151 Fragaria vesca HOM05D003995 ORTHO05D004800 1.5e-13 82.4 51 74.5
FvH4_7g32131 Fragaria vesca HOM05D003995 ORTHO05D004800 7.5e-13 80.1 51 72.5
Zm00001eb248030 Zea mays HOM05D002169 ORTHO05D004800 5.9e-10 70.5 89 53.9
Pp3c1_18430 Physcomitrium patens HOM05D003995 ORTHO05D004800 2.5e-08 65.1 421 27.3
Gohir.D03G024850 Gossypium hirsutum HOM05D003995 ORTHO05D004800 9.5e-08 63.2 97 43.3
MBI03_g21265_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 1.2e-07 62.8 39 69.2
Gorai.003G083400 Gossypium raimondii HOM05D003995 ORTHO05D004800 2.3e-06 58.5 97 42.3


User provided reference genes

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