Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0665G600 Amborella trichopoda HOM05D003302 ORTHO05D003785 4.8e-51 204.1 99 100.0
ATR0827G173 Amborella trichopoda HOM05D003302 ORTHO05D003785 2.2e-43 178.7 95 89.5
Aqoxy3G02548 Aquilegia oxysepala HOM05D003302 ORTHO05D003785 3.5e-41 171.4 95 85.3
Os10g0567500 Oryza sativa ssp. japonica HOM05D003302 ORTHO05D003785 1.7e-40 169.1 95 83.2
Zm00001eb004560 Zea mays HOM05D003302 ORTHO05D003785 3.8e-40 167.9 95 83.2
Zm00001eb210180 Zea mays HOM05D003302 ORTHO05D003785 3.8e-40 167.9 95 83.2
Nn1g00641 Nelumbo nucifera HOM05D003302 ORTHO05D003785 5.0e-40 167.5 93 86.0
GSVIVG01023127001 Vitis vinifera HOM05D003302 ORTHO05D003785 2.1e-38 162.2 95 78.9
Cpa.g.sc29.6 Carica papaya HOM05D003302 ORTHO05D003785 3.6e-38 161.4 95 80.0
Dinv28907 Davidia involucrata HOM05D003302 ORTHO05D003785 3.6e-38 161.4 95 78.9
QL12p007349 Quercus lobata HOM05D003302 ORTHO05D003785 3.6e-38 161.4 95 78.9
Oeu037876.2 Olea europaea HOM05D003302 ORTHO05D003785 4.7e-38 161.0 95 78.9
MSTRG.1965 Avicennia marina HOM05D003302 ORTHO05D003785 8.0e-38 160.2 95 78.9
Ca_00809_v3 Cicer arietinum L. HOM05D003302 ORTHO05D003785 8.0e-38 160.2 95 81.1
PSO063G6934 Papaver somniferum HOM05D003302 ORTHO05D003785 8.0e-38 160.2 95 78.9
PSO782G0278 Papaver somniferum HOM05D003302 ORTHO05D003785 8.0e-38 160.2 95 78.9
TPR.G26325 Trifolium pratense HOM05D003302 ORTHO05D003785 8.0e-38 160.2 95 81.1
HPP92_007162 Vanilla planifolia HOM05D003302 ORTHO05D003785 8.0e-38 160.2 95 78.9
FAN08G3359 Fragaria x ananassa HOM05D003302 ORTHO05D003785 1.0e-37 159.8 95 78.9
FAN18G0007 Fragaria x ananassa HOM05D003302 ORTHO05D003785 1.0e-37 159.8 95 78.9
RcHm_v2.0_Chr7g0208021 Rosa chinensis HOM05D003302 ORTHO05D003785 1.0e-37 159.8 95 78.9
CiPaw.12G059400 Carya illinoinensis HOM05D003302 ORTHO05D003785 1.4e-37 159.5 95 78.9
FvH4_5g21000 Fragaria vesca HOM05D003302 ORTHO05D003785 1.4e-37 159.5 95 78.9
Actinidia03397 Actinidia chinensis HOM05D003302 ORTHO05D003785 1.8e-37 159.1 95 78.9
CDE12G0679 Ceratophyllum demersum HOM05D003302 ORTHO05D003785 1.8e-37 159.1 93 82.8
FAN13G0755 Fragaria x ananassa HOM05D003302 ORTHO05D003785 1.8e-37 159.1 95 78.9
Rhsim04G0067200 Rhododendron simsii HOM05D003302 ORTHO05D003785 1.8e-37 159.1 95 77.9
Sopen08g025970 Solanum pennellii HOM05D003302 ORTHO05D003785 1.8e-37 159.1 95 80.0
PGSC0003DMG400001864 Solanum tuberosum HOM05D003302 ORTHO05D003785 1.8e-37 159.1 95 80.0
THA.LOC104798339 Tarenaya hassleriana HOM05D003302 ORTHO05D003785 1.8e-37 159.1 95 78.9
TAR375G0955 Trochodendron aralioides HOM05D003302 ORTHO05D003785 1.8e-37 159.1 95 78.9
unitig_62.g23447 Utricularia gibba HOM05D003302 ORTHO05D003785 1.8e-37 159.1 95 77.9
unitig_65.g29877 Utricularia gibba HOM05D003302 ORTHO05D003785 1.8e-37 159.1 95 77.9
vmacro00359 Vaccinium macrocarpon HOM05D003302 ORTHO05D003785 1.8e-37 159.1 95 77.9
CDE06G1020 Ceratophyllum demersum HOM05D003302 ORTHO05D003785 3.0e-37 158.3 93 82.8
CANSAT11G1544 Cannabis sativa HOM05D003302 ORTHO05D003785 4.0e-37 157.9 95 77.9
CAN.G572.44 Capsicum annuum HOM05D003302 ORTHO05D003785 4.0e-37 157.9 95 78.9
CAN.G572.50 Capsicum annuum HOM05D003302 ORTHO05D003785 4.0e-37 157.9 95 78.9
Nitab4.5_0004832g0030 Nicotiana tabacum HOM05D003302 ORTHO05D003785 4.0e-37 157.9 95 78.9
Nitab4.5_0008694g0030 Nicotiana tabacum HOM05D003302 ORTHO05D003785 4.0e-37 157.9 95 78.9
Solyc08g077385.1 Solanum lycopersicum HOM05D003302 ORTHO05D003785 4.0e-37 157.9 95 78.9
DCAR_005601 Daucus carota HOM05D003302 ORTHO05D003785 6.8e-37 157.1 95 77.9
Prupe.5G048500 Prunus persica HOM05D003302 ORTHO05D003785 8.8e-37 156.8 95 77.9
Glyma.15G129400 Glycine max HOM05D003302 ORTHO05D003785 1.2e-36 156.4 95 77.9
Lj8P288T36 Lonicera japonica HOM05D003302 ORTHO05D003785 1.2e-36 156.4 95 76.8
Cfa012369 Carpinus fangiana HOM05D003302 ORTHO05D003785 1.5e-36 156.0 95 76.8
Haze_08314 Corylus avellana HOM05D003302 ORTHO05D003785 1.5e-36 156.0 95 76.8
Haze_08315 Corylus avellana HOM05D003302 ORTHO05D003785 1.5e-36 156.0 95 76.8
Psat1g168040 Pisum sativum HOM05D003302 ORTHO05D003785 1.5e-36 156.0 95 78.9
Glyma.09G023300 Glycine max HOM05D003302 ORTHO05D003785 2.0e-36 155.6 95 77.9
Manes.15G171966 Manihot esculenta HOM05D003302 ORTHO05D003785 2.0e-36 155.6 95 75.8
TWI60G1391 Tripterygium wilfordii HOM05D003302 ORTHO05D003785 2.0e-36 155.6 95 76.8
arahy.Tifrunner.gnm1.ann1.HY98G0 Arachis hypogaea HOM05D003302 ORTHO05D003785 2.6e-36 155.2 95 77.9
arahy.Tifrunner.gnm1.ann1.K481AV Arachis hypogaea HOM05D003302 ORTHO05D003785 2.6e-36 155.2 95 77.9
CAN.G289.41 Capsicum annuum HOM05D003302 ORTHO05D003785 2.6e-36 155.2 95 77.9
Phvul.006G128900 Phaseolus vulgaris HOM05D003302 ORTHO05D003785 2.6e-36 155.2 95 77.9
VMungo0540G1460 Vigna mungo HOM05D003302 ORTHO05D003785 2.6e-36 155.2 95 75.8
Duzib084G0162 Durio zibethinus HOM05D003302 ORTHO05D003785 3.4e-36 154.8 95 74.7
ClCG09G012410 Citrullus lanatus HOM05D003302 ORTHO05D003785 7.5e-36 153.7 95 76.8
MELO3C003368.2 Cucumis melo HOM05D003302 ORTHO05D003785 7.5e-36 153.7 95 76.8
CsaV3_3G049580 Cucumis sativus L. HOM05D003302 ORTHO05D003785 7.5e-36 153.7 95 76.8
Duzib205G0194 Durio zibethinus HOM05D003302 ORTHO05D003785 9.8e-36 153.3 95 73.7
Lalb_Chr18g0057931 Lupinus albus HOM05D003302 ORTHO05D003785 9.8e-36 153.3 95 76.8
Thecc.03G235300 Theobroma cacao HOM05D003302 ORTHO05D003785 9.8e-36 153.3 95 73.7
COL.COLO4_17129 Corchorus olitorius HOM05D003302 ORTHO05D003785 1.3e-35 152.9 95 74.7
Gohir.A03G002901 Gossypium hirsutum HOM05D003302 ORTHO05D003785 1.3e-35 152.9 95 73.7
Gohir.D03G169466 Gossypium hirsutum HOM05D003302 ORTHO05D003785 1.3e-35 152.9 95 73.7
Potri.003G086801 Populus trichocarpa HOM05D003302 ORTHO05D003785 1.7e-35 152.5 95 75.8
PGR142G3064 Punica granatum HOM05D003302 ORTHO05D003785 2.8e-35 151.8 95 75.8
Atru.chr6.1790 Acer truncatum HOM05D003302 ORTHO05D003785 6.3e-35 150.6 95 74.7
Potri.001G147801 Populus trichocarpa HOM05D003302 ORTHO05D003785 6.3e-35 150.6 95 74.7
Sabra03G0056500 Salix brachista HOM05D003302 ORTHO05D003785 1.1e-34 149.8 95 74.7
HanXRQChr16g0522971 Helianthus annuus HOM05D003302 ORTHO05D003785 1.4e-34 149.4 95 73.7
Lsat_1_v5_gn_4_38500 Lactuca sativa HOM05D003302 ORTHO05D003785 2.4e-34 148.7 95 72.6
Sc25g0000590 Simmondsia chinensis HOM05D003302 ORTHO05D003785 5.4e-34 147.5 95 73.7
A06p45460 Brassica napus HOM05D003302 ORTHO05D003785 7.0e-34 147.1 95 73.7
BraA06t27414Z Brassica rapa HOM05D003302 ORTHO05D003785 7.0e-34 147.1 95 73.7
Sed0026531 Sechium edule HOM05D003302 ORTHO05D003785 1.2e-33 146.4 95 73.7
C07p30510 Brassica napus HOM05D003302 ORTHO05D003785 1.6e-33 146.0 95 73.7
BolC7t43592H Brassica oleracea HOM05D003302 ORTHO05D003785 1.6e-33 146.0 95 73.7
Sp2g11710 Schrenkiella parvula HOM05D003302 ORTHO05D003785 1.6e-33 146.0 95 73.7
AUR62025829 Chenopodium quinoa HOM05D003302 ORTHO05D003785 2.0e-33 145.6 95 71.6
AUR62029877 Chenopodium quinoa HOM05D003302 ORTHO05D003785 2.0e-33 145.6 95 71.6
SEGI_25417 Sequoiadendron giganteum HOM05D003302 ORTHO05D003785 2.0e-33 145.6 95 72.6
ECA248G2391 Erigeron canadensis HOM05D003302 ORTHO05D003785 3.5e-33 144.8 95 70.5
CAN.G15328.1 Capsicum annuum HOM05D003302 ORTHO05D003785 4.5e-33 144.4 119 63.0
HanXRQChr07g0188531 Helianthus annuus HOM05D003302 ORTHO05D003785 7.8e-33 143.7 95 70.5
Aa31LG9G6000 Aethionema arabicum HOM05D003302 ORTHO05D003785 1.7e-32 142.5 95 70.5
EL10Ac5g11380 Beta vulgaris HOM05D003302 ORTHO05D003785 2.9e-32 141.7 95 70.5
AT5G46920 Arabidopsis thaliana HOM05D003302 ORTHO05D003785 3.8e-32 141.4 95 69.5
SHI07509 Sapria himalayana HOM05D003302 ORTHO05D003785 3.3e-31 138.3 95 69.5
AL8G11350 Arabidopsis lyrata HOM05D003302 ORTHO05D003785 1.2e-30 136.3 95 67.4
PGR083G1399 Punica granatum HOM05D003302 ORTHO05D003785 4.4e-28 127.9 96 63.5
Nn3g20766 Nelumbo nucifera HOM05D003302 ORTHO05D003785 2.2e-27 125.6 96 61.5
BcaC05g27013 Brassica carinata HOM05D003302 ORTHO05D003785 3.7e-27 124.8 96 61.5
C05p28800 Brassica napus HOM05D003302 ORTHO05D003785 3.7e-27 124.8 96 61.5
BolC5t31597H Brassica oleracea HOM05D003302 ORTHO05D003785 3.7e-27 124.8 96 61.5
Sc05g0006220 Simmondsia chinensis HOM05D003302 ORTHO05D003785 3.7e-27 124.8 96 61.5
SEGI_34960 Sequoiadendron giganteum HOM05D003302 ORTHO05D003785 4.9e-27 124.4 91 62.6
BraA09t39172Z Brassica rapa HOM05D003302 ORTHO05D003785 6.4e-27 124.0 96 61.5
Cpa.g.sc166.10 Carica papaya HOM05D003302 ORTHO05D003785 6.4e-27 124.0 96 60.4
Gohir.A11G314450 Gossypium hirsutum HOM05D003302 ORTHO05D003785 8.3e-27 123.6 96 60.4
Gohir.D11G331550 Gossypium hirsutum HOM05D003302 ORTHO05D003785 8.3e-27 123.6 96 60.4
QL10p038886 Quercus lobata HOM05D003302 ORTHO05D003785 1.4e-26 122.9 96 58.3
THA.LOC104820647 Tarenaya hassleriana HOM05D003302 ORTHO05D003785 1.4e-26 122.9 96 60.4
Aa31LG6G5650 Aethionema arabicum HOM05D003302 ORTHO05D003785 1.8e-26 122.5 96 60.4
A09p36490 Brassica napus HOM05D003302 ORTHO05D003785 1.8e-26 122.5 96 60.4
Oeu034153.1 Olea europaea HOM05D003302 ORTHO05D003785 1.8e-26 122.5 96 59.4
CARHR029380 Cardamine hirsuta HOM05D003302 ORTHO05D003785 2.4e-26 122.1 96 60.4
CDE11G0149 Ceratophyllum demersum HOM05D003302 ORTHO05D003785 2.4e-26 122.1 94 58.5
Manes.17G069108 Manihot esculenta HOM05D003302 ORTHO05D003785 2.4e-26 122.1 96 59.4
AL1G43900 Arabidopsis lyrata HOM05D003302 ORTHO05D003785 3.2e-26 121.7 96 60.4
Glyma.15G094350 Glycine max HOM05D003302 ORTHO05D003785 3.2e-26 121.7 96 60.4
HPP92_002850 Vanilla planifolia HOM05D003302 ORTHO05D003785 3.2e-26 121.7 96 59.4
Sp1g25890 Schrenkiella parvula HOM05D003302 ORTHO05D003785 4.1e-26 121.3 96 59.4
Thecc.05G173100 Theobroma cacao HOM05D003302 ORTHO05D003785 4.1e-26 121.3 96 58.3
TAR629G3501 Trochodendron aralioides HOM05D003302 ORTHO05D003785 4.1e-26 121.3 96 61.5
VMungo0540G2182 Vigna mungo HOM05D003302 ORTHO05D003785 4.1e-26 121.3 96 59.4
Potri.004G132450 Populus trichocarpa HOM05D003302 ORTHO05D003785 5.4e-26 120.9 96 59.4
Zm00001eb006520 Zea mays HOM05D003302 ORTHO05D003785 5.4e-26 120.9 96 59.4
AT1G30010 Arabidopsis thaliana HOM05D003302 ORTHO05D003785 7.0e-26 120.6 96 59.4
CsaV3_1G032460 Cucumis sativus L. HOM05D003302 ORTHO05D003785 7.0e-26 120.6 94 59.6
Sabra04G0085500 Salix brachista HOM05D003302 ORTHO05D003785 7.0e-26 120.6 96 59.4
SHI24871 Sapria himalayana HOM05D003302 ORTHO05D003785 7.0e-26 120.6 94 59.6
unitig_32.g11443 Utricularia gibba HOM05D003302 ORTHO05D003785 7.0e-26 120.6 94 60.6
ATR0064G047 Amborella trichopoda HOM05D003302 ORTHO05D003785 9.2e-26 120.2 95 57.9
Ca_00544_v3 Cicer arietinum L. HOM05D003302 ORTHO05D003785 9.2e-26 120.2 96 59.4
COL.COLO4_29330 Corchorus olitorius HOM05D003302 ORTHO05D003785 9.2e-26 120.2 96 57.3
Dinv30741 Davidia involucrata HOM05D003302 ORTHO05D003785 9.2e-26 120.2 96 58.3
Hma1.2p1_0053F.1_g030960 Hydrangea macrophylla HOM05D003302 ORTHO05D003785 9.2e-26 120.2 96 57.3
Psat1g190600 Pisum sativum HOM05D003302 ORTHO05D003785 9.2e-26 120.2 96 59.4
Cfa000950 Carpinus fangiana HOM05D003302 ORTHO05D003785 1.2e-25 119.8 96 59.4
Haze_05590 Corylus avellana HOM05D003302 ORTHO05D003785 1.2e-25 119.8 96 59.4
Os12g0407300 Oryza sativa ssp. japonica HOM05D003302 ORTHO05D003785 1.6e-25 119.4 96 59.4
ClCG03G006880 Citrullus lanatus HOM05D003302 ORTHO05D003785 2.0e-25 119.0 94 58.5
Lj1P1187T27 Lonicera japonica HOM05D003302 ORTHO05D003785 2.0e-25 119.0 96 58.3
Lalb_Chr15g0086841 Lupinus albus HOM05D003302 ORTHO05D003785 2.0e-25 119.0 96 59.4
Nitab4.5_0000165g0160 Nicotiana tabacum HOM05D003302 ORTHO05D003785 2.0e-25 119.0 96 58.3
arahy.Tifrunner.gnm1.ann1.JNH5N4 Arachis hypogaea HOM05D003302 ORTHO05D003785 2.7e-25 118.6 96 60.4
arahy.Tifrunner.gnm1.ann1.VBQQ6F Arachis hypogaea HOM05D003302 ORTHO05D003785 2.7e-25 118.6 96 60.4
CANSAT35G0225 Cannabis sativa HOM05D003302 ORTHO05D003785 2.7e-25 118.6 96 58.3
Nitab4.5_0011942g0010 Nicotiana tabacum HOM05D003302 ORTHO05D003785 2.7e-25 118.6 96 58.3
EL10Ac4g07785 Beta vulgaris HOM05D003302 ORTHO05D003785 3.5e-25 118.2 96 59.4
CiPaw.09G124000 Carya illinoinensis HOM05D003302 ORTHO05D003785 3.5e-25 118.2 96 57.3
MBI07_g26352_MAGBIO Magnolia biondii HOM05D003302 ORTHO05D003785 3.5e-25 118.2 96 56.2
Ah.09g232620 Amaranthus hybridus HOM05D003302 ORTHO05D003785 4.6e-25 117.9 96 57.3
AUR62030203 Chenopodium quinoa HOM05D003302 ORTHO05D003785 4.6e-25 117.9 96 58.3
Actinidia19525 Actinidia chinensis HOM05D003302 ORTHO05D003785 7.8e-25 117.1 96 57.3
Atru.chr10.1237 Acer truncatum HOM05D003302 ORTHO05D003785 1.0e-24 116.7 96 55.2
CAN.G1235.21 Capsicum annuum HOM05D003302 ORTHO05D003785 1.0e-24 116.7 96 57.3
MELO3C002733.2 Cucumis melo HOM05D003302 ORTHO05D003785 1.0e-24 116.7 94 58.5
AUR62002753 Chenopodium quinoa HOM05D003302 ORTHO05D003785 1.3e-24 116.3 96 57.3
Duzib128G1415 Durio zibethinus HOM05D003302 ORTHO05D003785 1.3e-24 116.3 96 57.3
Aqoxy1G01714 Aquilegia oxysepala HOM05D003302 ORTHO05D003785 1.7e-24 115.9 96 56.2
MD10G1262500 Malus domestica HOM05D003302 ORTHO05D003785 1.7e-24 115.9 96 55.2
Rhsim13G0194800 Rhododendron simsii HOM05D003302 ORTHO05D003785 1.7e-24 115.9 96 57.3
Solyc01g112025.1 Solanum lycopersicum HOM05D003302 ORTHO05D003785 1.7e-24 115.9 96 57.3
Sopen01g054090 Solanum pennellii HOM05D003302 ORTHO05D003785 1.7e-24 115.9 96 57.3
MD05G1284200 Malus domestica HOM05D003302 ORTHO05D003785 2.3e-24 115.5 96 55.2
RcHm_v2.0_Chr5g0014061 Rosa chinensis HOM05D003302 ORTHO05D003785 2.3e-24 115.5 96 54.2
Nn6g33801 Nelumbo nucifera HOM05D003302 ORTHO05D003785 3.0e-24 115.2 71 81.7
PGSC0003DMG400018655 Solanum tuberosum HOM05D003302 ORTHO05D003785 3.0e-24 115.2 96 57.3
EL10Ac8g19691 Beta vulgaris HOM05D003302 ORTHO05D003785 3.9e-24 114.8 96 59.4
SGA_v2.0_scaffold1G00170 Striga asiatica HOM05D003302 ORTHO05D003785 3.9e-24 114.8 96 56.2
FvH4_3g05620 Fragaria vesca HOM05D003302 ORTHO05D003785 5.0e-24 114.4 96 54.2
FAN11G3285 Fragaria x ananassa HOM05D003302 ORTHO05D003785 5.0e-24 114.4 96 54.2
FAN21G1953 Fragaria x ananassa HOM05D003302 ORTHO05D003785 5.0e-24 114.4 96 54.2
HanXRQChr15g0486511 Helianthus annuus HOM05D003302 ORTHO05D003785 5.0e-24 114.4 94 55.3
vmacro03962 Vaccinium macrocarpon HOM05D003302 ORTHO05D003785 6.6e-24 114.0 96 56.2
ECA232G0620 Erigeron canadensis HOM05D003302 ORTHO05D003785 8.6e-24 113.6 96 53.1
Glyma.13G218051 Glycine max HOM05D003302 ORTHO05D003785 1.5e-23 112.8 96 58.3
DCAR_003918 Daucus carota HOM05D003302 ORTHO05D003785 1.9e-23 112.5 96 55.2
TWI38G0102 Tripterygium wilfordii HOM05D003302 ORTHO05D003785 1.9e-23 112.5 96 56.2
Lsat_1_v5_gn_8_116740 Lactuca sativa HOM05D003302 ORTHO05D003785 9.5e-23 110.2 94 53.2
PSO675G7265 Papaver somniferum HOM05D003302 ORTHO05D003785 2.1e-22 109.0 96 54.2
PSO541G5669 Papaver somniferum HOM05D003302 ORTHO05D003785 2.8e-22 108.6 96 54.2
ATR1091G061 Amborella trichopoda HOM05D003302 ORTHO05D003785 1.4e-21 106.3 93 53.8
Actinidia16714 Actinidia chinensis HOM05D003302 ORTHO05D003785 7.8e-17 90.5 96 46.9
FAN04G2497 Fragaria x ananassa HOM05D003302 ORTHO05D003785 6.2e-14 80.9 48 70.8
TAR383G0221 Trochodendron aralioides HOM05D003302 ORTHO05D003785 2.3e-13 79.0 48 68.8
TPR.G26652 Trifolium pratense HOM05D003302 ORTHO05D003785 3.7e-11 71.6 57 64.9
Rhsim11G0009600 Rhododendron simsii HOM05D003302 ORTHO05D003785 3.5e-09 65.1 40 67.5


User provided reference genes

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