Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0661G567 Amborella trichopoda HOM05D001987 ORTHO05D006514 1.1e-167 593.2 306 100.0
TAR358G0001 Trochodendron aralioides HOM05D001987 ORTHO05D006514 5.9e-124 448.0 309 78.6
Lj2P1221T93 Lonicera japonica HOM05D001987 ORTHO05D006514 1.2e-121 440.3 309 77.3
MBI05_g05348_MAGBIO Magnolia biondii HOM05D001987 ORTHO05D006514 6.1e-121 438.0 306 77.1
Solyc00g500100.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.4e-120 436.8 309 77.0
Solyc00g500274.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.4e-120 436.8 309 77.0
TPR.G26049 Trifolium pratense HOM05D001987 ORTHO05D006514 5.8e-119 431.4 309 75.7
LjContig00315g0000313 Lotus japonicus HOM05D001987 ORTHO05D006514 8.3e-118 427.6 309 75.7
Solyc00g500309.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.4e-117 426.8 308 76.0
Solyc00g500245.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 2.5e-114 416.0 292 77.1
DCAR_032448 Daucus carota HOM05D001987 ORTHO05D006514 5.6e-114 414.8 309 74.4
Dinv06676 Davidia involucrata HOM05D001987 ORTHO05D006514 7.3e-114 414.5 292 77.1
Psat7g012480 Pisum sativum HOM05D001987 ORTHO05D006514 7.3e-114 414.5 292 77.1
Cfa023008 Carpinus fangiana HOM05D001987 ORTHO05D006514 1.6e-113 413.3 292 76.4
Solyc00g500117.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 4.0e-112 408.7 309 73.8
Sc17g0003730 Simmondsia chinensis HOM05D001987 ORTHO05D006514 6.8e-112 407.9 304 73.0
arahy.Tifrunner.gnm1.ann1.8UR9GU Arachis hypogaea HOM05D001987 ORTHO05D006514 1.5e-111 406.8 302 74.8
arahy.Tifrunner.gnm1.ann1.K88Y93 Arachis hypogaea HOM05D001987 ORTHO05D006514 1.5e-111 406.8 302 74.8
arahy.Tifrunner.gnm1.ann1.TY26DT Arachis hypogaea HOM05D001987 ORTHO05D006514 1.5e-111 406.8 302 74.8
CANSAT16G0046 Cannabis sativa HOM05D001987 ORTHO05D006514 2.2e-110 402.9 300 75.0
Lsat_1_v5_gn_0_38040 Lactuca sativa HOM05D001987 ORTHO05D006514 8.3e-110 401.0 309 73.1
CARHR282630 Cardamine hirsuta HOM05D001987 ORTHO05D006514 1.2e-103 380.6 309 70.9
ATMG00090 Arabidopsis thaliana HOM05D001987 ORTHO05D006514 4.4e-103 378.6 309 70.6
A04p09400 Brassica napus HOM05D001987 ORTHO05D006514 2.2e-102 376.3 309 70.6
Hma1.2p1_0105F.1_g050680 Hydrangea macrophylla HOM05D001987 ORTHO05D006514 1.9e-101 373.2 269 76.6
Lalb_Chr00c21g0405751 Lupinus albus HOM05D001987 ORTHO05D006514 4.1e-101 372.1 277 74.0
Lalb_Chr00c24g0407071 Lupinus albus HOM05D001987 ORTHO05D006514 4.1e-101 372.1 277 74.0
BolSC28t60371H Brassica oleracea HOM05D001987 ORTHO05D006514 1.2e-100 370.5 309 70.2
Lalb_Chr11g0070101 Lupinus albus HOM05D001987 ORTHO05D006514 1.3e-99 367.1 277 73.3
CARHR288240 Cardamine hirsuta HOM05D001987 ORTHO05D006514 5.1e-99 365.2 299 70.6
Nitab4.5_0009561g0020 Nicotiana tabacum HOM05D001987 ORTHO05D006514 5.6e-98 361.7 272 71.7
CsaV3_UNG208600 Cucumis sativus L. HOM05D001987 ORTHO05D006514 1.6e-97 360.1 367 58.9
arahy.Tifrunner.gnm1.ann1.7A4IEF Arachis hypogaea HOM05D001987 ORTHO05D006514 3.6e-97 359.0 268 73.9
SHI29633 Sapria himalayana HOM05D001987 ORTHO05D006514 1.4e-96 357.1 293 70.3
HanXRQChr16g0504311 Helianthus annuus HOM05D001987 ORTHO05D006514 2.0e-95 353.2 271 72.3
HanXRQMTg0579601 Helianthus annuus HOM05D001987 ORTHO05D006514 2.0e-95 353.2 271 72.3
Ah.10g027970 Amaranthus hybridus HOM05D001987 ORTHO05D006514 1.3e-94 350.5 290 67.2
HanXRQChr05g0147721 Helianthus annuus HOM05D001987 ORTHO05D006514 4.9e-94 348.6 271 71.6
PSO541G5803 Papaver somniferum HOM05D001987 ORTHO05D006514 3.2e-93 345.9 299 62.9
PSO675G5335 Papaver somniferum HOM05D001987 ORTHO05D006514 3.2e-93 345.9 299 63.2
CDE02G0251 Ceratophyllum demersum HOM05D001987 ORTHO05D006514 1.6e-92 343.6 342 60.2
Eucgr.H02719 Eucalyptus grandis HOM05D001987 ORTHO05D006514 1.5e-90 337.0 304 62.8
Ah.10g028690 Amaranthus hybridus HOM05D001987 ORTHO05D006514 4.3e-90 335.5 287 66.6
Hund28418 Selenicereus undatus HOM05D001987 ORTHO05D006514 1.4e-88 330.5 302 61.6
Hund29734 Selenicereus undatus HOM05D001987 ORTHO05D006514 1.4e-88 330.5 302 61.6
Hund29823 Selenicereus undatus HOM05D001987 ORTHO05D006514 1.4e-88 330.5 302 61.6
Hund30343 Selenicereus undatus HOM05D001987 ORTHO05D006514 1.4e-88 330.5 302 61.6
Hund30419 Selenicereus undatus HOM05D001987 ORTHO05D006514 1.4e-88 330.5 302 61.6
SGA_v2.0_scaffold255G45472 Striga asiatica HOM05D001987 ORTHO05D006514 9.0e-88 327.8 264 69.7
Lj2P1230T111 Lonicera japonica HOM05D001987 ORTHO05D006514 7.1e-85 318.2 231 75.8
Solyc12g038985.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 7.3e-82 308.1 301 60.5
BraSC159t45730Z Brassica rapa HOM05D001987 ORTHO05D006514 6.9e-80 301.6 252 68.7
Gorai.001G161500 Gossypium raimondii HOM05D001987 ORTHO05D006514 6.9e-80 301.6 267 67.0
SHI20096 Sapria himalayana HOM05D001987 ORTHO05D006514 2.0e-79 300.1 247 70.0
ClCG08G015640 Citrullus lanatus HOM05D001987 ORTHO05D006514 1.5e-74 283.9 248 65.3
Hund12658 Selenicereus undatus HOM05D001987 ORTHO05D006514 3.1e-72 276.2 295 55.6
Sp3g25720 Schrenkiella parvula HOM05D001987 ORTHO05D006514 5.5e-69 265.4 219 68.9
Peaxi162Scf01098g00013 Petunia axillaris HOM05D001987 ORTHO05D006514 8.2e-65 251.5 174 75.9
Ah.02g118900 Amaranthus hybridus HOM05D001987 ORTHO05D006514 1.5e-63 247.3 287 53.0
BolSC28t60315H Brassica oleracea HOM05D001987 ORTHO05D006514 6.1e-60 235.3 192 69.3
RhsimMtG0002600 Rhododendron simsii HOM05D001987 ORTHO05D006514 1.1e-56 224.6 167 74.3
Aa31csc822G30 Aethionema arabicum HOM05D001987 ORTHO05D006514 5.5e-53 212.2 165 72.7
HanXRQChr14g0433081 Helianthus annuus HOM05D001987 ORTHO05D006514 7.2e-53 211.8 202 62.4
SEGI_40200 Sequoiadendron giganteum HOM05D001987 ORTHO05D006514 1.2e-52 211.1 292 46.9
Ca_30750_v3 Cicer arietinum L. HOM05D001987 ORTHO05D006514 3.9e-51 206.1 292 47.6
Nn1g10074 Nelumbo nucifera HOM05D001987 ORTHO05D006514 2.2e-49 200.3 145 76.6
Lsat_1_v5_gn_8_132861 Lactuca sativa HOM05D001987 ORTHO05D006514 1.2e-47 194.5 132 77.3
unitig_87.g28029 Utricularia gibba HOM05D001987 ORTHO05D006514 8.5e-46 188.3 292 45.2
SalBow1G3504 Salvia bowleyana HOM05D001987 ORTHO05D006514 1.9e-45 187.2 292 45.2
SalBow1G4210 Salvia bowleyana HOM05D001987 ORTHO05D006514 1.9e-45 187.2 292 45.2
Actinidia34925 Actinidia chinensis HOM05D001987 ORTHO05D006514 2.5e-45 186.8 128 77.3
MBI16_g09478_MAGBIO Magnolia biondii HOM05D001987 ORTHO05D006514 9.4e-45 184.9 128 77.3
arahy.Tifrunner.gnm1.ann1.L3L3JQ Arachis hypogaea HOM05D001987 ORTHO05D006514 1.8e-43 180.6 302 41.7
Nitab4.5_0000334g0030 Nicotiana tabacum HOM05D001987 ORTHO05D006514 3.9e-43 179.5 223 51.6
Lalb_Chr11g0070921 Lupinus albus HOM05D001987 ORTHO05D006514 5.7e-42 175.6 149 67.8
Peaxi162Scf00238g00149 Petunia axillaris HOM05D001987 ORTHO05D006514 1.6e-36 157.5 123 67.5
Eucgr.J02744 Eucalyptus grandis HOM05D001987 ORTHO05D006514 3.9e-35 152.9 100 78.0
Dinv35896 Davidia involucrata HOM05D001987 ORTHO05D006514 1.7e-33 147.5 137 60.6
BraSC48t46330Z Brassica rapa HOM05D001987 ORTHO05D006514 5.3e-32 142.5 93 79.6
ECA240G1514 Erigeron canadensis HOM05D001987 ORTHO05D006514 3.5e-31 139.8 113 70.8
Solyc09g015850.4 Solanum lycopersicum HOM05D001987 ORTHO05D006514 5.9e-31 139.0 89 78.7
Nitab4.5_0007876g0050 Nicotiana tabacum HOM05D001987 ORTHO05D006514 4.0e-27 126.3 173 48.0
Nitab4.5_0000309g0180 Nicotiana tabacum HOM05D001987 ORTHO05D005620 5.2e-27 125.9 107 64.5
Nitab4.5_0000309g0190 Nicotiana tabacum HOM05D001987 ORTHO05D006514 6.8e-27 125.6 136 55.9
Solyc12g035820.3 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.4e-24 117.9 212 40.1
Gohir.A13G113500 Gossypium hirsutum HOM05D001987 ORTHO05D006514 4.1e-24 116.3 86 68.6
SGA_v2.0_scaffold339G49282 Striga asiatica HOM05D001987 ORTHO05D006514 4.1e-24 116.3 89 71.9
Solyc08g045870.3 Solanum lycopersicum HOM05D001987 ORTHO05D006514 9.4e-21 105.1 65 80.0
TPR.G21771 Trifolium pratense HOM05D001987 ORTHO05D006514 1.1e-16 91.7 92 56.5
Cpa.g.sc1367.1 Carica papaya HOM05D001987 ORTHO05D006514 3.1e-16 90.1 54 81.5
Nitab4.5_0000330g0070 Nicotiana tabacum HOM05D001987 ORTHO05D006514 9.1e-16 88.6 55 80.0
SHI01963 Sapria himalayana HOM05D001987 ORTHO05D006514 9.1e-16 88.6 93 54.8
Solyc05g045840.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.2e-15 88.2 66 69.7
Hund30965 Selenicereus undatus HOM05D001987 ORTHO05D006514 1.0e-14 85.1 59 74.6
Nitab4.5_0007962g0010 Nicotiana tabacum HOM05D001987 ORTHO05D006514 1.3e-14 84.7 66 69.7
arahy.Tifrunner.gnm1.ann1.D5EGR1 Arachis hypogaea HOM05D001987 ORTHO05D006514 5.5e-13 79.3 53 77.4
Peaxi162Scf00360g00815 Petunia axillaris HOM05D001987 ORTHO05D006514 1.6e-12 77.8 71 59.2
AagrBONN_evm.TU.Sc2ySwM_362.2082 Anthoceros agrestis HOM05D001987 ORTHO05D006514 2.8e-12 77.0 125 38.4
SHI11171 Sapria himalayana HOM05D001987 ORTHO05D006514 4.0e-11 73.2 156 35.3
Solyc05g045920.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 5.7e-10 69.3 44 75.0
Pp3c2_23480 Physcomitrium patens HOM05D001987 ORTHO05D006514 2.2e-09 67.4 124 37.1
Solyc05g045824.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 4.9e-09 66.2 63 60.3
Psat1g091000 Pisum sativum HOM05D001987 ORTHO05D006514 1.8e-08 64.3 43 74.4
Solyc03g063770.3 Solanum lycopersicum HOM05D001987 ORTHO05D006514 7.0e-08 62.4 57 63.2
Solyc05g045828.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.6e-07 61.2 46 67.4
MELO3C028575.2 Cucumis melo HOM05D001987 ORTHO05D006514 2.0e-07 60.8 37 78.4
EL10Ac1g01304 Beta vulgaris HOM05D001987 ORTHO05D006514 4.6e-07 59.7 37 75.7
SHI01964 Sapria himalayana HOM05D001987 ORTHO05D006514 7.8e-07 58.9 64 56.2
Solyc05g045780.1 Solanum lycopersicum HOM05D001987 ORTHO05D004018 2.9e-06 57.0 44 65.9
Solyc05g045826.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 5.0e-06 56.2 39 69.2


User provided reference genes

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