Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0661G389 Amborella trichopoda HOM05D006705 ORTHO05D008179 7.2e-158 561.6 598 100.0
CDE02G1751 Ceratophyllum demersum HOM05D006705 ORTHO05D008179 1.5e-46 191.8 232 47.0
Atru.chr13.134 Acer truncatum HOM05D006705 ORTHO05D008179 3.5e-43 180.6 235 43.4
Rhsim06G0007500 Rhododendron simsii HOM05D006705 ORTHO05D008179 5.9e-43 179.9 235 45.1
Nn5g30939 Nelumbo nucifera HOM05D006705 ORTHO05D008179 2.2e-42 177.9 214 47.7
ECA232G0132 Erigeron canadensis HOM05D006705 ORTHO05D008179 2.9e-42 177.6 299 36.8
Aqoxy5G01043 Aquilegia oxysepala HOM05D006705 ORTHO05D008179 3.8e-42 177.2 214 46.7
TAR376G0550 Trochodendron aralioides HOM05D006705 ORTHO05D008179 5.0e-42 176.8 214 47.2
Cfa014075 Carpinus fangiana HOM05D006705 ORTHO05D008179 8.5e-42 176.0 216 44.9
Haze_22772 Corylus avellana HOM05D006705 ORTHO05D008179 1.5e-41 175.3 213 45.1
RcHm_v2.0_Chr6g0304261 Rosa chinensis HOM05D006705 ORTHO05D008179 2.5e-41 174.5 217 45.2
Cpa.g.sc26.199 Carica papaya HOM05D006705 ORTHO05D008179 4.2e-41 173.7 222 44.1
Hma1.2p1_0507F.1_g168450 Hydrangea macrophylla HOM05D006705 ORTHO05D008179 2.1e-40 171.4 215 45.1
ClCG08G009460 Citrullus lanatus HOM05D006705 ORTHO05D008179 4.7e-40 170.2 214 44.9
Dinv05535 Davidia involucrata HOM05D006705 ORTHO05D008179 4.7e-40 170.2 214 44.9
FAN27G0286 Fragaria x ananassa HOM05D006705 ORTHO05D008179 4.7e-40 170.2 215 43.7
Sabra05G0193800 Salix brachista HOM05D006705 ORTHO05D008179 4.7e-40 170.2 229 42.8
Actinidia15490 Actinidia chinensis HOM05D006705 ORTHO05D008179 6.1e-40 169.9 220 44.1
Manes.05G134500 Manihot esculenta HOM05D006705 ORTHO05D008179 6.1e-40 169.9 214 44.9
CAN.G985.2 Capsicum annuum HOM05D006705 ORTHO05D008179 1.0e-39 169.1 214 45.8
CsaV3_6G031600 Cucumis sativus L. HOM05D006705 ORTHO05D008179 1.0e-39 169.1 214 45.3
Nitab4.5_0000337g0230 Nicotiana tabacum HOM05D006705 ORTHO05D008179 1.0e-39 169.1 215 45.1
Nitab4.5_0025577g0010 Nicotiana tabacum HOM05D006705 ORTHO05D008179 1.0e-39 169.1 215 45.1
QL02p014030 Quercus lobata HOM05D006705 ORTHO05D008179 1.0e-39 169.1 219 43.8
Sc15g0004450 Simmondsia chinensis HOM05D006705 ORTHO05D008179 1.8e-39 168.3 236 42.8
PSO210G3824 Papaver somniferum HOM05D006705 ORTHO05D008179 2.3e-39 167.9 215 44.7
Aa31LG9G12430 Aethionema arabicum HOM05D006705 ORTHO05D008179 3.0e-39 167.5 214 44.4
CSS0004504 Camellia sinensis var. sinensis HOM05D006705 ORTHO05D008179 3.0e-39 167.5 214 44.4
CSS0019684 Camellia sinensis var. sinensis HOM05D006705 ORTHO05D008179 3.0e-39 167.5 214 44.4
COL.COLO4_06661 Corchorus olitorius HOM05D006705 ORTHO05D008179 3.0e-39 167.5 215 44.2
MELO3C026541.2 Cucumis melo HOM05D006705 ORTHO05D008179 3.0e-39 167.5 214 44.4
PSO170G2138 Papaver somniferum HOM05D006705 ORTHO05D008179 3.0e-39 167.5 215 44.7
Thecc.08G058800 Theobroma cacao HOM05D006705 ORTHO05D008179 4.0e-39 167.2 219 44.3
MD12G1003200 Malus domestica HOM05D006705 ORTHO05D008179 5.2e-39 166.8 217 42.9
Sed0011006 Sechium edule HOM05D006705 ORTHO05D008179 5.2e-39 166.8 214 44.4
Ciclev10000451m.g Citrus clementina HOM05D006705 ORTHO05D008179 1.5e-38 165.2 218 44.0
Gohir.A01G105700 Gossypium hirsutum HOM05D006705 ORTHO05D008179 2.0e-38 164.9 219 44.3
PGSC0003DMG400011663 Solanum tuberosum HOM05D006705 ORTHO05D008179 2.0e-38 164.9 214 45.3
THA.LOC104825423 Tarenaya hassleriana HOM05D006705 ORTHO05D008179 2.0e-38 164.9 214 43.9
Gorai.002G117100 Gossypium raimondii HOM05D006705 ORTHO05D008179 2.6e-38 164.5 219 44.3
Oeu007482.1 Olea europaea HOM05D006705 ORTHO05D008179 3.3e-38 164.1 220 43.6
CARHR284920 Cardamine hirsuta HOM05D006705 ORTHO05D008179 4.4e-38 163.7 214 44.9
Glyma.06G018300 Glycine max HOM05D006705 ORTHO05D008179 7.5e-38 162.9 212 43.9
Gohir.D01G092000 Gossypium hirsutum HOM05D006705 ORTHO05D008179 9.7e-38 162.5 219 43.8
Glyma.04G018000 Glycine max HOM05D006705 ORTHO05D008179 1.3e-37 162.2 217 43.3
FvH4_2g37460 Fragaria vesca HOM05D006705 ORTHO05D008179 2.2e-37 161.4 210 43.3
Psat5g159080 Pisum sativum HOM05D006705 ORTHO05D008179 2.8e-37 161.0 214 43.0
DCAR_013913 Daucus carota HOM05D006705 ORTHO05D008179 3.7e-37 160.6 211 45.0
Ca_15434_v3 Cicer arietinum L. HOM05D006705 ORTHO05D008179 4.8e-37 160.2 214 42.1
Ca_15459_v3 Cicer arietinum L. HOM05D006705 ORTHO05D008179 4.8e-37 160.2 214 42.1
CANSAT25G1831 Cannabis sativa HOM05D006705 ORTHO05D008179 6.3e-37 159.8 214 41.6
Cc10_g00680 Coffea canephora HOM05D006705 ORTHO05D008179 6.3e-37 159.8 215 44.7
Prupe.1G354600 Prunus persica HOM05D006705 ORTHO05D008179 3.1e-36 157.5 210 41.9
Lalb_Chr11g0061641 Lupinus albus HOM05D006705 ORTHO05D008179 4.1e-36 157.1 214 42.5
FAN15G2229 Fragaria x ananassa HOM05D006705 ORTHO05D008179 9.1e-36 156.0 205 43.4
BcaC06g31759 Brassica carinata HOM05D006705 ORTHO05D008179 1.2e-35 155.6 199 46.2
A03p65890 Brassica napus HOM05D006705 ORTHO05D008179 1.2e-35 155.6 199 46.2
BraA03t15643Z Brassica rapa HOM05D006705 ORTHO05D008179 1.2e-35 155.6 199 46.2
Potri.005G250200 Populus trichocarpa HOM05D006705 ORTHO05D008179 1.6e-35 155.2 218 40.8
GSVIVG01013362001 Vitis vinifera HOM05D006705 ORTHO05D008179 1.6e-35 155.2 199 43.2
BcaC02g10761 Brassica carinata HOM05D006705 ORTHO05D008179 2.0e-35 154.8 199 46.2
C04p25410 Brassica napus HOM05D006705 ORTHO05D008179 2.0e-35 154.8 199 46.2
BolC4t24049H Brassica oleracea HOM05D006705 ORTHO05D008179 2.0e-35 154.8 199 46.2
SalBow7G0522 Salvia bowleyana HOM05D006705 ORTHO05D008179 4.5e-35 153.7 214 43.9
CDE04G2934 Ceratophyllum demersum HOM05D006705 ORTHO05D008179 5.9e-35 153.3 251 39.4
Peaxi162Scf00400g00113 Petunia axillaris HOM05D006705 ORTHO05D008179 7.7e-35 152.9 214 42.1
Sabra02G0008200 Salix brachista HOM05D006705 ORTHO05D008179 7.7e-35 152.9 228 39.5
Hund05113 Selenicereus undatus HOM05D006705 ORTHO05D008179 7.7e-35 152.9 214 43.0
Thhalv10027665m.g Eutrema salsugineum HOM05D006705 ORTHO05D008179 1.7e-34 151.8 198 44.4
Solyc08g045850.3 Solanum lycopersicum HOM05D006705 ORTHO05D008179 2.2e-34 151.4 203 43.8
Sopen08g014170 Solanum pennellii HOM05D006705 ORTHO05D008179 2.2e-34 151.4 203 43.8
Phvul.009G010700 Phaseolus vulgaris HOM05D006705 ORTHO05D008179 3.8e-34 150.6 202 43.6
AUR62043173 Chenopodium quinoa HOM05D006705 ORTHO05D008179 5.0e-34 150.2 217 42.4
Lsat_1_v5_gn_9_45140 Lactuca sativa HOM05D006705 ORTHO05D008179 5.0e-34 150.2 217 40.1
MSTRG.1107 Avicennia marina HOM05D006705 ORTHO05D008179 6.5e-34 149.8 215 41.9
AUR62036875 Chenopodium quinoa HOM05D006705 ORTHO05D008179 6.5e-34 149.8 217 42.4
VMungo1309G2580 Vigna mungo HOM05D006705 ORTHO05D008179 6.5e-34 149.8 202 43.6
CiPaw.08G072900 Carya illinoinensis HOM05D006705 ORTHO05D008179 8.5e-34 149.4 200 43.0
Migut.C00960 Erythranthe guttata HOM05D006705 ORTHO05D008179 8.5e-34 149.4 215 42.3
Lj1g0004605 Lotus japonicus HOM05D006705 ORTHO05D008179 8.5e-34 149.4 200 43.0
Sp7g08260 Schrenkiella parvula HOM05D006705 ORTHO05D008179 1.1e-33 149.1 197 43.7
vmacro21812 Vaccinium macrocarpon HOM05D006705 ORTHO05D008179 1.5e-33 148.7 215 40.9
HanXRQChr05g0146791 Helianthus annuus HOM05D006705 ORTHO05D008179 3.2e-33 147.5 209 41.6
MBI08_g41522_MAGBIO Magnolia biondii HOM05D006705 ORTHO05D008179 3.2e-33 147.5 239 41.8
Zm00001eb323580 Zea mays HOM05D006705 ORTHO05D008179 5.5e-33 146.7 257 40.9
arahy.Tifrunner.gnm1.ann1.1DQJ64 Arachis hypogaea HOM05D006705 ORTHO05D008179 1.2e-32 145.6 195 42.6
arahy.Tifrunner.gnm1.ann1.A2XG10 Arachis hypogaea HOM05D006705 ORTHO05D008179 1.2e-32 145.6 195 42.6
AL8G19290 Arabidopsis lyrata HOM05D006705 ORTHO05D008179 1.6e-32 145.2 197 42.6
Carub.0008s0687 Capsella rubella HOM05D006705 ORTHO05D008179 3.6e-32 144.1 197 42.6
Medtr3g115270 Medicago truncatula HOM05D006705 ORTHO05D008179 3.6e-32 144.1 199 42.2
TPR.G38137 Trifolium pratense HOM05D006705 ORTHO05D008179 3.6e-32 144.1 194 41.2
FAN20G2687 Fragaria x ananassa HOM05D000148 ORTHO05D008179 4.7e-32 143.7 190 42.6
MD15G1002100 Malus domestica HOM05D006705 ORTHO05D008179 4.7e-32 143.7 208 39.4
Os07g0548300 Oryza sativa ssp. japonica HOM05D006705 ORTHO05D008179 8.0e-32 142.9 257 39.7
PGR031G2749 Punica granatum HOM05D006705 ORTHO05D008179 8.0e-32 142.9 213 41.3
HPP92_000875 Vanilla planifolia HOM05D006705 ORTHO05D008179 1.8e-31 141.7 208 43.8
AT5G42310 Arabidopsis thaliana HOM05D006705 ORTHO05D008179 2.3e-31 141.4 196 42.3
HanXRQChr12g0367581 Helianthus annuus HOM05D006705 ORTHO05D008179 6.8e-31 139.8 220 38.6
Lsat_1_v5_gn_8_26180 Lactuca sativa HOM05D006705 ORTHO05D008179 6.8e-31 139.8 218 38.5
EL10Ac1g01967 Beta vulgaris HOM05D006705 ORTHO05D008179 9.8e-30 136.0 205 40.5
Potri.002G010900 Populus trichocarpa HOM05D006705 ORTHO05D008179 6.3e-29 133.3 199 38.7
SGA_v2.0_scaffold108G30860 Striga asiatica HOM05D006705 ORTHO05D008179 8.3e-29 132.9 202 38.6
Lj4A11G70 Lonicera japonica HOM05D006705 ORTHO05D008179 5.4e-28 130.2 180 43.3
Ah.11g041180 Amaranthus hybridus HOM05D006705 ORTHO05D008179 7.0e-28 129.8 204 40.2
ECA233G5787 Erigeron canadensis HOM05D006705 ORTHO05D008179 3.5e-27 127.5 220 37.3
SEGI_04333 Sequoiadendron giganteum HOM05D006705 ORTHO05D000002 6.3e-21 106.7 187 35.8
Mapoly0048s0090 Marchantia polymorpha HOM05D006705 ORTHO05D008179 5.4e-20 103.6 219 32.0
Eucgr.F03553 Eucalyptus grandis HOM05D006705 ORTHO05D008179 8.0e-16 89.7 129 42.6
CDE02G4098 Ceratophyllum demersum HOM05D006705 ORTHO05D008179 5.2e-15 87.0 49 83.7
Nitab4.5_0002710g0130 Nicotiana tabacum HOM05D006705 ORTHO05D008179 5.2e-15 87.0 49 81.6
Eucgr.F03554 Eucalyptus grandis HOM05D006705 ORTHO05D008179 6.8e-15 86.7 49 81.6
SMO180G0012 Selaginella moellendorffii HOM05D006705 ORTHO05D008179 2.0e-14 85.1 172 33.7
Gohir.D06G036701 Gossypium hirsutum HOM05D006705 ORTHO05D008179 4.4e-14 84.0 49 81.6
Gorai.010G041000 Gossypium raimondii HOM05D006705 ORTHO05D008179 4.4e-14 84.0 49 81.6
FvH4_5g30181 Fragaria vesca HOM05D006705 ORTHO05D008179 3.7e-13 80.9 87 47.1
Gohir.D05G336850 Gossypium hirsutum HOM05D006705 ORTHO05D008179 1.4e-12 79.0 57 71.9
AagrBONN_evm.TU.Sc2ySwM_362.1316 Anthoceros agrestis HOM05D006705 ORTHO05D008179 7.0e-12 76.6 169 33.1
BcaNung05253 Brassica carinata HOM05D006705 ORTHO05D008179 3.0e-10 71.2 49 67.3
PGR142G2334 Punica granatum HOM05D007456 ORTHO05D009411 3.3e-09 67.8 47 63.8
Peaxi162Scf00398g00211 Petunia axillaris HOM05D007456 ORTHO05D009411 5.6e-09 67.0 119 31.1
Cc11_g03880 Coffea canephora HOM05D007456 ORTHO05D009411 1.6e-08 65.5 47 61.7
Nitab4.5_0016432g0010 Nicotiana tabacum HOM05D007456 ORTHO05D009411 3.6e-08 64.3 115 32.2
ClCG07G017250 Citrullus lanatus HOM05D007456 ORTHO05D009411 6.2e-08 63.5 144 29.9
Lj1C1032G4 Lonicera japonica HOM05D007456 ORTHO05D009411 8.0e-08 63.2 47 57.4
CDE02G0006 Ceratophyllum demersum HOM05D007456 ORTHO05D009411 1.8e-07 62.0 47 59.6
Sed0026452 Sechium edule HOM05D007456 ORTHO05D009411 5.2e-07 60.5 149 28.2
CsaV3_4G004450 Cucumis sativus L. HOM05D007456 ORTHO05D009411 6.8e-07 60.1 148 28.4
Gohir.D06G157800 Gossypium hirsutum HOM05D000485 ORTHO05D000341 8.9e-07 59.7 35 80.0
MD02G1151200 Malus domestica HOM05D000891 ORTHO05D000761 2.0e-06 58.5 239 24.7
Sopen10g030890 Solanum pennellii HOM05D007456 ORTHO05D009411 2.0e-06 58.5 115 29.6
PGSC0003DMG400023682 Solanum tuberosum HOM05D007456 ORTHO05D009411 2.6e-06 58.2 115 29.6
MD15G1265700 Malus domestica HOM05D000891 ORTHO05D000761 3.4e-06 57.8 239 24.7
FAN03G3193 Fragaria x ananassa HOM05D007456 ORTHO05D009411 7.5e-06 56.6 133 28.6


User provided reference genes

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