Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0618G448 Amborella trichopoda HOM05D006314 ORTHO05D007970 3.4e-140 501.9 297 100.0
CiPaw.09G086300 Carya illinoinensis HOM05D006314 ORTHO05D007970 2.8e-78 296.2 244 69.3
CiPaw.09G085200 Carya illinoinensis HOM05D006314 ORTHO05D007970 8.2e-78 294.7 238 70.2
Ciclev10018286m.g Citrus clementina HOM05D006314 ORTHO05D007970 6.9e-77 291.6 236 78.8
Aqoxy5G01372 Aquilegia oxysepala HOM05D006314 ORTHO05D007970 9.0e-77 291.2 247 72.5
Potri.004G039400 Populus trichocarpa HOM05D006314 ORTHO05D007970 9.0e-77 291.2 243 71.2
GSVIVG01012621001 Vitis vinifera HOM05D006314 ORTHO05D007970 9.0e-77 291.2 251 65.3
Manes.14G141100 Manihot esculenta HOM05D006314 ORTHO05D007970 1.2e-76 290.8 231 76.6
Prupe.4G027100 Prunus persica HOM05D006314 ORTHO05D007970 4.5e-76 288.9 230 70.9
Cfa021643 Carpinus fangiana HOM05D006314 ORTHO05D007970 8.4e-75 284.6 249 69.5
EL10Ac8g19905 Beta vulgaris HOM05D006314 ORTHO05D007970 4.2e-74 282.3 249 70.7
Nn1g03656 Nelumbo nucifera HOM05D006314 ORTHO05D007970 2.7e-73 279.6 223 78.0
Hund21374 Selenicereus undatus HOM05D006314 ORTHO05D007970 2.7e-73 279.6 233 67.4
Ah.14g088200 Amaranthus hybridus HOM05D006314 ORTHO05D007970 6.0e-73 278.5 224 69.6
AL6G48810 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 7.9e-73 278.1 231 63.2
MD05G1340500 Malus domestica HOM05D006314 ORTHO05D007970 7.9e-73 278.1 281 62.3
Gorai.010G176200 Gossypium raimondii HOM05D006314 ORTHO05D007970 1.0e-72 277.7 232 67.2
COL.COLO4_31719 Corchorus olitorius HOM05D006314 ORTHO05D007970 1.8e-72 276.9 260 62.7
QL05p075316 Quercus lobata HOM05D006314 ORTHO05D007970 3.0e-72 276.2 263 62.4
Gohir.A06G145000 Gossypium hirsutum HOM05D006314 ORTHO05D007970 3.3e-71 272.7 232 62.1
HanXRQChr05g0130041 Helianthus annuus HOM05D006314 ORTHO05D007970 1.3e-70 270.8 245 69.4
SalBow8G4748 Salvia bowleyana HOM05D006314 ORTHO05D007970 3.7e-70 269.2 268 62.3
ECA236G4636 Erigeron canadensis HOM05D006314 ORTHO05D007970 4.8e-70 268.9 221 71.0
Sabra04G0024200 Salix brachista HOM05D006314 ORTHO05D007970 4.8e-70 268.9 285 54.0
SGA_v2.0_scaffold7G03887 Striga asiatica HOM05D006314 ORTHO05D007970 8.2e-70 268.1 266 63.2
CANSAT56G1066 Cannabis sativa HOM05D006314 ORTHO05D007970 1.4e-69 267.3 235 73.6
Duzib235G0913 Durio zibethinus HOM05D006314 ORTHO05D007970 6.9e-69 265.0 253 58.5
Lsat_1_v5_gn_7_17861 Lactuca sativa HOM05D006314 ORTHO05D007970 1.2e-68 264.2 272 64.3
CDE05G2602 Ceratophyllum demersum HOM05D006314 ORTHO05D007970 3.8e-67 259.2 277 58.5
MBI02_g34312_MAGBIO Magnolia biondii HOM05D006314 ORTHO05D007970 3.8e-67 259.2 252 65.9
Migut.M01276 Erythranthe guttata HOM05D006314 ORTHO05D007970 1.1e-66 257.7 229 67.7
SEGI_37493 Sequoiadendron giganteum HOM05D006314 ORTHO05D007970 1.1e-66 257.7 240 59.2
HPP92_009390 Vanilla planifolia HOM05D006314 ORTHO05D007970 1.1e-66 257.7 249 65.1
AT4G05210 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 3.2e-66 256.1 230 65.7
Cpa.g.sc81.24 Carica papaya HOM05D006314 ORTHO05D007970 4.2e-66 255.8 249 63.9
HPP92_009395 Vanilla planifolia HOM05D006314 ORTHO05D007970 4.2e-66 255.8 248 65.3
AL7G32880 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 5.5e-66 255.4 252 63.1
Actinidia05538 Actinidia chinensis HOM05D006314 ORTHO05D007970 1.2e-65 254.2 223 75.3
CsaV3_6G049280 Cucumis sativus L. HOM05D006314 ORTHO05D007970 1.2e-65 254.2 265 60.0
BcaB01g01893 Brassica carinata HOM05D006314 ORTHO05D007970 3.6e-65 252.7 221 67.9
Carub.0007s2019 Capsella rubella HOM05D006314 ORTHO05D007970 3.6e-65 252.7 221 69.2
Haze_06726 Corylus avellana HOM05D006314 ORTHO05D007970 7.9e-65 251.5 289 52.2
CAN.G404.73 Capsicum annuum HOM05D006314 ORTHO05D007970 1.8e-64 250.4 222 66.7
BcaC04g21385 Brassica carinata HOM05D006314 ORTHO05D007970 2.3e-64 250.0 230 64.8
C09p32430 Brassica napus HOM05D006314 ORTHO05D007970 2.3e-64 250.0 230 64.8
BolC9t56088H Brassica oleracea HOM05D006314 ORTHO05D007970 2.3e-64 250.0 230 64.8
A09p25520 Brassica napus HOM05D006314 ORTHO05D007970 3.0e-64 249.6 230 65.2
AT4G21220 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 5.1e-64 248.8 230 64.3
BraA09t38127Z Brassica rapa HOM05D006314 ORTHO05D007970 1.1e-63 247.7 230 64.3
PGR031G0385 Punica granatum HOM05D006314 ORTHO05D007970 1.1e-63 247.7 252 68.7
CARHR227820 Cardamine hirsuta HOM05D006314 ORTHO05D007970 2.5e-63 246.5 221 75.1
Solyc03g031560.4 Solanum lycopersicum HOM05D006314 ORTHO05D007970 4.3e-63 245.7 259 59.8
DCAR_004187 Daucus carota HOM05D006314 ORTHO05D007970 7.4e-63 245.0 227 69.6
ClCG01G022220 Citrullus lanatus HOM05D006314 ORTHO05D007970 2.8e-62 243.0 252 67.1
Eucgr.D00832 Eucalyptus grandis HOM05D006314 ORTHO05D007970 3.7e-62 242.7 266 64.3
Medtr7g047630 Medicago truncatula HOM05D006314 ORTHO05D007970 1.8e-61 240.4 245 64.1
Medtr7g451810 Medicago truncatula HOM05D006314 ORTHO05D007970 1.8e-61 240.4 245 64.1
Actinidia26953 Actinidia chinensis HOM05D006314 ORTHO05D007970 3.1e-61 239.6 160 78.8
RcHm_v2.0_Chr5g0004131 Rosa chinensis HOM05D006314 ORTHO05D007970 3.1e-61 239.6 272 60.7
Thhalv10025838m.g Eutrema salsugineum HOM05D006314 ORTHO05D007970 6.9e-61 238.4 270 60.4
FvH4_3g02730 Fragaria vesca HOM05D006314 ORTHO05D007970 1.2e-60 237.7 262 63.7
MELO3C007369.2 Cucumis melo HOM05D006314 ORTHO05D007970 2.6e-60 236.5 249 62.2
Lj1A1224T36 Lonicera japonica HOM05D006314 ORTHO05D007970 1.3e-59 234.2 212 73.1
PSO675G3227 Papaver somniferum HOM05D006314 ORTHO05D007970 2.2e-59 233.4 271 55.4
Haze_06729 Corylus avellana HOM05D006314 ORTHO05D007970 2.9e-59 233.0 167 73.1
Oeu002711.1 Olea europaea HOM05D006314 ORTHO05D007970 2.9e-59 233.0 226 65.5
Gohir.D06G151200 Gossypium hirsutum HOM05D006314 ORTHO05D007970 6.5e-59 231.9 203 56.2
PSO541G6217 Papaver somniferum HOM05D006314 ORTHO05D007970 8.5e-59 231.5 271 55.0
VMungo1215G0781 Vigna mungo HOM05D006314 ORTHO05D007970 1.1e-58 231.1 254 60.2
Glyma.01G240700 Glycine max HOM05D006314 ORTHO05D007970 1.4e-58 230.7 235 63.0
Aa31LG9G9230 Aethionema arabicum HOM05D006314 ORTHO05D007970 5.5e-58 228.8 257 58.4
FAN21G1433 Fragaria x ananassa HOM05D006314 ORTHO05D007970 9.4e-58 228.0 251 55.4
Cc00_g17320 Coffea canephora HOM05D006314 ORTHO05D007970 3.6e-57 226.1 297 58.6
TPR.G10185 Trifolium pratense HOM05D006314 ORTHO05D007970 7.9e-57 224.9 223 65.5
Lj1g0010466 Lotus japonicus HOM05D006314 ORTHO05D007970 1.0e-56 224.6 282 55.0
Mapoly0013s0096 Marchantia polymorpha HOM05D006314 ORTHO05D007970 1.4e-56 224.2 229 60.7
Phvul.002G049200 Phaseolus vulgaris HOM05D006314 ORTHO05D007970 1.4e-56 224.2 234 61.5
Sopen03g005440 Solanum pennellii HOM05D006314 ORTHO05D007970 1.4e-56 224.2 230 67.8
AUR62012635 Chenopodium quinoa HOM05D006314 ORTHO05D007970 2.0e-55 220.3 296 54.7
Rhsim13G0158200 Rhododendron simsii HOM05D006314 ORTHO05D007970 4.4e-55 219.2 264 55.7
THA.LOC104812945 Tarenaya hassleriana HOM05D006314 ORTHO05D007970 7.4e-55 218.4 247 62.8
Lalb_Chr16g0376341 Lupinus albus HOM05D006314 ORTHO05D007970 3.7e-54 216.1 233 67.0
FAN25G2977 Fragaria x ananassa HOM05D006314 ORTHO05D007970 4.8e-54 215.7 282 52.5
Ca_07429_v3 Cicer arietinum L. HOM05D006314 ORTHO05D007970 9.1e-53 211.5 214 65.0
Thecc.06G213300 Theobroma cacao HOM05D006314 ORTHO05D007970 9.1e-53 211.5 162 73.5
AagrBONN_evm.TU.Sc2ySwM_228.2540 Anthoceros agrestis HOM05D006314 ORTHO05D007970 4.5e-52 209.1 228 63.6
vmacro03713 Vaccinium macrocarpon HOM05D006314 ORTHO05D007970 1.3e-51 207.6 166 70.5
Sp6g03780 Schrenkiella parvula HOM05D006314 ORTHO05D007970 8.5e-51 204.9 230 65.7
Zm00001eb306890 Zea mays HOM05D006314 ORTHO05D007970 1.4e-50 204.1 254 60.2
TWI38G0264 Tripterygium wilfordii HOM05D006314 ORTHO05D007970 2.6e-47 193.4 280 49.3
Hma1.2p1_0729F.1_g209630 Hydrangea macrophylla HOM05D006314 ORTHO05D007970 7.4e-47 191.8 182 52.7
CBR_g20160 Chara braunii HOM05D006314 ORTHO05D007970 1.7e-46 190.7 166 65.7
Dinv17838 Davidia involucrata HOM05D006314 ORTHO05D007970 8.2e-46 188.3 189 64.6
Nitab4.5_0004428g0040 Nicotiana tabacum HOM05D006314 ORTHO05D007970 5.3e-45 185.7 220 45.9
arahy.Tifrunner.gnm1.ann1.937J55 Arachis hypogaea HOM05D006314 ORTHO05D007970 2.0e-44 183.7 214 64.5
arahy.Tifrunner.gnm1.ann1.PEH28W Arachis hypogaea HOM05D006314 ORTHO05D007970 2.0e-44 183.7 214 64.5
Sc05g0008810 Simmondsia chinensis HOM05D006314 ORTHO05D007970 3.5e-44 183.0 222 57.7
Psat3g152680 Pisum sativum HOM05D006314 ORTHO05D007970 4.5e-44 182.6 172 67.4
PGSC0003DMG400005049 Solanum tuberosum HOM05D006314 ORTHO05D007970 1.3e-43 181.0 177 66.7
AUR62022021 Chenopodium quinoa HOM05D006314 ORTHO05D007970 1.7e-43 180.6 282 45.0
Pp3c4_25780 Physcomitrium patens HOM05D006314 ORTHO05D007970 1.9e-42 177.2 290 49.0
Glyma.11G002900 Glycine max HOM05D006314 ORTHO05D007970 5.2e-40 169.1 157 56.1
Nn5g27983 Nelumbo nucifera HOM05D006314 ORTHO05D007970 7.5e-39 165.2 116 68.1
Nitab4.5_0000900g0100 Nicotiana tabacum HOM05D006314 ORTHO05D007970 2.8e-38 163.3 220 48.2
CSS0045332 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 2.7e-36 156.8 124 75.0
unitig_748.g7139 Utricularia gibba HOM05D006350 ORTHO05D007850 1.0e-35 154.8 144 56.2
PRCOL_00005452 Prasinoderma coloniale HOM05D006314 ORTHO05D007970 3.2e-34 149.8 167 53.9
TAR627G0699 Trochodendron aralioides HOM05D006314 ORTHO05D007970 2.1e-33 147.1 100 84.0
SMO004G0010 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 1.8e-29 134.0 227 43.2
Sed0025568 Sechium edule HOM05D006314 ORTHO05D007970 1.3e-27 127.9 249 47.0
Peaxi162Scf00781g00047 Petunia axillaris HOM05D006314 ORTHO05D007970 1.6e-25 120.9 149 57.0
MSTRG.16127 Avicennia marina HOM05D006314 ORTHO05D007970 1.1e-21 108.2 151 41.1
CSS0018641 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 2.0e-20 104.0 103 71.8
SMO361G0013 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 4.3e-18 96.3 212 40.1
Os07g0134400 Oryza sativa ssp. japonica HOM05D006314 ORTHO05D007970 3.7e-14 83.2 147 48.3
FAN25G3594 Fragaria x ananassa HOM05D006314 ORTHO05D007970 1.7e-11 74.3 42 76.2
QL05p075461 Quercus lobata HOM05D006314 ORTHO05D030082 3.4e-07 60.1 47 55.3
MD10G1314000 Malus domestica HOM05D006314 ORTHO05D007970 1.3e-06 58.2 36 69.4


User provided reference genes

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