Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0609G054 Amborella trichopoda HOM05D000113 ORTHO05D018288 3.4e-65 251.5 126 100.0
ATR0686G052 Amborella trichopoda HOM05D000113 ORTHO05D008562 2.2e-56 222.2 118 94.9
Prupe.1G232100 Prunus persica HOM05D000113 ORTHO05D008562 8.9e-26 120.6 116 56.0
MBI11_g06758_MAGBIO Magnolia biondii HOM05D000113 ORTHO05D008562 1.2e-25 120.2 115 53.9
Phvul.002G175400 Phaseolus vulgaris HOM05D000113 ORTHO05D008562 1.2e-25 120.2 120 55.8
Cc10_g14680 Coffea canephora HOM05D000113 ORTHO05D008562 1.5e-25 119.8 119 53.8
CSS0012872 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D008562 3.4e-25 118.6 118 51.7
Lalb_Chr13g0294201 Lupinus albus HOM05D000113 ORTHO05D008562 3.4e-25 118.6 116 56.0
Aqoxy5G03470 Aquilegia oxysepala HOM05D000113 ORTHO05D008562 4.4e-25 118.2 118 54.2
arahy.Tifrunner.gnm1.ann1.NKV86Z Arachis hypogaea HOM05D000113 ORTHO05D008562 4.4e-25 118.2 120 53.3
CSS0004442 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D018288 5.8e-25 117.9 118 53.4
Glyma.05G146100 Glycine max HOM05D000113 ORTHO05D008562 5.8e-25 117.9 116 56.9
MD13G1115200 Malus domestica HOM05D000113 ORTHO05D008562 9.9e-25 117.1 116 53.4
Oeu049156.1 Olea europaea HOM05D000113 ORTHO05D008562 9.9e-25 117.1 117 52.1
CSS0049691 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D008562 1.3e-24 116.7 118 53.4
Ah.03g133940 Amaranthus hybridus HOM05D000113 ORTHO05D008562 1.7e-24 116.3 118 51.7
Potri.010G057200 Populus trichocarpa HOM05D000113 ORTHO05D008562 2.9e-24 115.5 118 51.7
Sabra10G0048100 Salix brachista HOM05D000113 ORTHO05D018288 2.9e-24 115.5 118 51.7
SalBow8G0141 Salvia bowleyana HOM05D000113 ORTHO05D008562 3.8e-24 115.2 117 49.6
Actinidia08083 Actinidia chinensis HOM05D000113 ORTHO05D008562 6.4e-24 114.4 118 51.7
MSTRG.13319 Avicennia marina HOM05D000113 ORTHO05D008562 6.4e-24 114.4 118 55.9
VMungo0251G3793 Vigna mungo HOM05D000113 ORTHO05D008562 1.1e-23 113.6 121 52.9
Atru.chr12.1400 Acer truncatum HOM05D000113 ORTHO05D008562 1.4e-23 113.2 119 55.5
Cfa009345 Carpinus fangiana HOM05D000113 ORTHO05D008562 1.4e-23 113.2 119 52.1
Sc11g0000600 Simmondsia chinensis HOM05D000113 ORTHO05D008562 1.4e-23 113.2 118 51.7
COL.COLO4_12820 Corchorus olitorius HOM05D000113 ORTHO05D008562 1.9e-23 112.8 118 55.1
Gohir.A03G128100 Gossypium hirsutum HOM05D000113 ORTHO05D008562 3.2e-23 112.1 120 54.2
Gorai.005G170100 Gossypium raimondii HOM05D000113 ORTHO05D008562 3.2e-23 112.1 120 54.2
Ca_18059_v3 Cicer arietinum L. HOM05D000113 ORTHO05D008562 4.2e-23 111.7 120 49.2
QL03p054546 Quercus lobata HOM05D000113 ORTHO05D008562 5.4e-23 111.3 115 53.9
Gohir.1Z049348 Gossypium hirsutum HOM05D000113 ORTHO05D008562 7.1e-23 110.9 118 51.7
Ciclev10030845m.g Citrus clementina HOM05D000113 ORTHO05D008562 9.3e-23 110.5 118 50.8
Hma1.2p1_0167F.1_g073650 Hydrangea macrophylla HOM05D000113 ORTHO05D008562 9.3e-23 110.5 118 50.0
TPR.G17102 Trifolium pratense HOM05D000113 ORTHO05D008562 9.3e-23 110.5 120 49.2
Peaxi162Scf00128g01050 Petunia axillaris HOM05D000113 ORTHO05D008562 1.2e-22 110.2 122 50.0
RcHm_v2.0_Chr4g0430911 Rosa chinensis HOM05D000113 ORTHO05D008562 1.2e-22 110.2 116 51.7
Lj4g0017956 Lotus japonicus HOM05D000113 ORTHO05D008562 1.6e-22 109.8 116 51.7
FAN22G1629 Fragaria x ananassa HOM05D000113 ORTHO05D008562 2.1e-22 109.4 116 50.9
Nitab4.5_0000148g0010 Nicotiana tabacum HOM05D000113 ORTHO05D008562 2.1e-22 109.4 125 48.0
Solyc05g015040.4 Solanum lycopersicum HOM05D000113 ORTHO05D008562 2.1e-22 109.4 125 49.6
Sopen05g010270 Solanum pennellii HOM05D000113 ORTHO05D008562 2.1e-22 109.4 125 49.6
FAN07G1018 Fragaria x ananassa HOM05D000113 ORTHO05D008562 2.7e-22 109.0 116 50.9
Lsat_1_v5_gn_4_2981 Lactuca sativa HOM05D000113 ORTHO05D008562 2.7e-22 109.0 118 50.8
Psat3g127880 Pisum sativum HOM05D000113 ORTHO05D008562 2.7e-22 109.0 123 48.8
FvH4_4g24140 Fragaria vesca HOM05D000113 ORTHO05D008562 3.5e-22 108.6 116 52.6
Hma1.2p1_1239F.1_g269370 Hydrangea macrophylla HOM05D000113 ORTHO05D008562 3.5e-22 108.6 118 47.5
Nn4g22387 Nelumbo nucifera HOM05D000113 ORTHO05D008562 3.5e-22 108.6 118 50.0
SGA_v2.0_scaffold87G27135 Striga asiatica HOM05D002893 ORTHO05D008562 3.5e-22 108.6 118 51.7
arahy.Tifrunner.gnm1.ann1.T9U85C Arachis hypogaea HOM05D000113 ORTHO05D008562 4.6e-22 108.2 115 50.4
Hma1.2p1_0167F.1_g073660 Hydrangea macrophylla HOM05D000113 ORTHO05D008562 4.6e-22 108.2 117 47.0
Rhsim12G0029400 Rhododendron simsii HOM05D000113 ORTHO05D008562 4.6e-22 108.2 116 50.9
Hund06073 Selenicereus undatus HOM05D000113 ORTHO05D008562 4.6e-22 108.2 123 50.4
Dinv14809 Davidia involucrata HOM05D000113 ORTHO05D008562 6.0e-22 107.8 118 49.2
MBI11_g39303_MAGBIO Magnolia biondii HOM05D047672 ORTHO05D018288 6.0e-22 107.8 106 54.7
ClCG08G017250 Citrullus lanatus HOM05D000113 ORTHO05D008562 7.8e-22 107.5 116 49.1
FAN17G0948 Fragaria x ananassa HOM05D000113 ORTHO05D008562 7.8e-22 107.5 116 50.0
FAN12G0097 Fragaria x ananassa HOM05D000113 ORTHO05D008562 1.0e-21 107.1 116 52.6
EL10Ac6g13461 Beta vulgaris HOM05D000113 ORTHO05D008562 1.3e-21 106.7 119 50.4
THA.LOC104820519 Tarenaya hassleriana HOM05D000113 ORTHO05D008562 1.3e-21 106.7 118 48.3
TAR622G1389 Trochodendron aralioides HOM05D000113 ORTHO05D008562 1.7e-21 106.3 120 47.5
vmacro01078 Vaccinium macrocarpon HOM05D000113 ORTHO05D008562 1.7e-21 106.3 116 47.4
GSVIVG01010362001 Vitis vinifera HOM05D000113 ORTHO05D008562 2.3e-21 105.9 119 47.1
Aa31sc262G20 Aethionema arabicum HOM05D000113 ORTHO05D008562 3.0e-21 105.5 116 48.3
CAN.G49.24 Capsicum annuum HOM05D000113 ORTHO05D018288 5.1e-21 104.8 116 48.3
CiPaw.05G113600 Carya illinoinensis HOM05D000113 ORTHO05D008562 5.1e-21 104.8 117 48.7
ECA234G4696 Erigeron canadensis HOM05D005590 ORTHO05D003891 5.1e-21 104.8 117 50.4
HanXRQChr17g0569131 Helianthus annuus HOM05D000113 ORTHO05D008562 5.1e-21 104.8 120 48.3
Medtr8g080240 Medicago truncatula HOM05D000113 ORTHO05D008562 5.1e-21 104.8 120 47.5
CsaV3_2G025370 Cucumis sativus L. HOM05D000113 ORTHO05D008562 6.6e-21 104.4 116 48.3
A08p26020 Brassica napus HOM05D000113 ORTHO05D008562 8.7e-21 104.0 118 46.6
Thhalv10006961m.g Eutrema salsugineum HOM05D000113 ORTHO05D008562 8.7e-21 104.0 120 47.5
Sed0020200 Sechium edule HOM05D000113 ORTHO05D008562 8.7e-21 104.0 116 47.4
CANSAT01G2860 Cannabis sativa HOM05D000113 ORTHO05D008562 1.5e-20 103.2 117 47.0
AL1G41380 Arabidopsis lyrata HOM05D000113 ORTHO05D008562 2.5e-20 102.4 118 48.3
BraA08t34552Z Brassica rapa HOM05D000113 ORTHO05D008562 2.5e-20 102.4 118 45.8
Manes.13G016800 Manihot esculenta HOM05D000113 ORTHO05D008562 2.5e-20 102.4 118 46.6
CDE08G0102 Ceratophyllum demersum HOM05D000113 ORTHO05D018288 3.3e-20 102.1 118 49.2
AUR62005584 Chenopodium quinoa HOM05D000113 ORTHO05D008562 3.3e-20 102.1 118 49.2
Lj3C1065T13 Lonicera japonica HOM05D000113 ORTHO05D008562 3.3e-20 102.1 117 47.9
Sp1g24080 Schrenkiella parvula HOM05D000113 ORTHO05D008562 3.3e-20 102.1 118 46.6
Nitab4.5_0000581g0010 Nicotiana tabacum HOM05D000113 ORTHO05D008562 4.3e-20 101.7 121 45.5
BcaNung07310 Brassica carinata HOM05D000113 ORTHO05D008562 5.6e-20 101.3 118 44.9
C03p74630 Brassica napus HOM05D000113 ORTHO05D008562 5.6e-20 101.3 118 44.9
BolC3t19711H Brassica oleracea HOM05D000113 ORTHO05D008562 5.6e-20 101.3 118 44.9
Zm00001eb375140 Zea mays HOM05D000113 ORTHO05D008562 7.3e-20 100.9 118 49.2
Carub.0001s2635 Capsella rubella HOM05D000113 ORTHO05D008562 1.6e-19 99.8 124 46.0
AUR62024146 Chenopodium quinoa HOM05D000113 ORTHO05D008562 1.6e-19 99.8 124 46.8
Eucgr.H04661 Eucalyptus grandis HOM05D000113 ORTHO05D008562 1.6e-19 99.8 118 46.6
PSO063G2601 Papaver somniferum HOM05D000113 ORTHO05D008562 2.8e-19 99.0 118 49.2
SEGI_24151 Sequoiadendron giganteum HOM05D000113 ORTHO05D018288 6.2e-19 97.8 118 45.8
Migut.E00033 Erythranthe guttata HOM05D000113 ORTHO05D008562 1.1e-18 97.1 111 46.8
HPP92_009956 Vanilla planifolia HOM05D000113 ORTHO05D008562 1.1e-18 97.1 116 45.7
PSO782G4255 Papaver somniferum HOM05D000113 ORTHO05D008562 1.4e-18 96.7 118 48.3
Thecc.02G275600 Theobroma cacao HOM05D000113 ORTHO05D008562 2.4e-18 95.9 118 46.6
Os11g0310800 Oryza sativa ssp. japonica HOM05D000113 ORTHO05D008562 2.6e-17 92.4 122 47.5
unitig_21.g20395 Utricularia gibba HOM05D000113 ORTHO05D008562 1.4e-15 86.7 117 41.9
AagrBONN_evm.TU.Sc2ySwM_117.2659 Anthoceros agrestis HOM05D000113 ORTHO05D008562 2.7e-14 82.4 115 42.6
MCO04G194 Micromonas commoda HOM05D000113 ORTHO05D008562 3.5e-14 82.0 116 40.5
arahy.Tifrunner.gnm1.ann1.KVY629 Arachis hypogaea HOM05D000113 ORTHO05D008562 7.9e-14 80.9 59 59.3
DCAR_031186 Daucus carota HOM05D000113 ORTHO05D008562 1.1e-12 77.0 118 39.8
Mapoly0039s0062 Marchantia polymorpha HOM05D000113 ORTHO05D008562 1.1e-12 77.0 118 37.3
Pp3c15_1470 Physcomitrium patens HOM05D000113 ORTHO05D008562 2.8e-11 72.4 120 36.7
CBR_g50284 Chara braunii HOM05D000113 ORTHO05D008562 4.8e-11 71.6 142 33.1
Cre12.g520150 Chlamydomonas reinhardtii HOM05D000113 ORTHO05D008562 4.5e-09 65.1 67 41.8
SMO364G0276 Selaginella moellendorffii HOM05D000113 ORTHO05D008562 4.5e-09 65.1 116 34.5


User provided reference genes

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