Gene: CSS0012872
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0012872
- Transcript Identifier CSS0012872.1
- Gene Type Coding gene
- Location Chr6 : 6373254-6397358 : positive
Gene Family Information
- ID HOM05D000113
- #Genes/#Species 2932/100
- Phylogenetic origin
- ID ORTHO05D008562
- #Genes/#Species 117/93
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid CSS0012872.1
Descriptions
- Description PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 isoform X1 [Vitis vinifera]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016070 | ISO | PLAZA Integrative Orthology | RNA metabolic process | Solyc05g015040.4 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004386 | IEA | InterPro | helicase activity | |
| GO:0003724 | ISO | PLAZA Integrative Orthology | RNA helicase activity | Solyc05g015040.4 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR011545 | DEAD/DEAH box helicase domain |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR007502 | Helicase-associated domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR011709 | Domain of unknown function DUF1605 |
| IPR001650 | Helicase, C-terminal |
| IPR003593 | AAA+ ATPase domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |