Gene: Sopen05g010270

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g010270
  • Transcript Identifier Sopen05g010270.1
  • Gene Type Coding gene
  • Location Spenn-ch05 : 10572410-10590475 : positive

Gene Family Information

  • ID HOM05D000113
  • #Genes/#Species 2932/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g010270.1

Descriptions

  • Description RNA helicase family protein | FUNCTIONS IN: in 7 functions | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Helicase-associated domain , ATPase, AAA type, core , DNA/RNA helicase, DEAD/DEAH box type, N-terminal , Domain of unknown function DUF1605 , DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site , DEAD-like helicase, N-terminal , DNA/RNA helicase, C-terminal , Helicase, superfamily 1/2, ATP-binding domain | BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc05g015040.4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0004386
IEA
InterProhelicase activity
GO:0003724
ISO
PLAZA Integrative OrthologyRNA helicase activity Solyc05g015040.4

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011545 DEAD/DEAH box helicase domain
IPR007502 Helicase-associated domain
IPR001650 Helicase, C-terminal
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR011709 Domain of unknown function DUF1605
Mapman id Description
35.1 not assigned.annotated