Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0605G237 Amborella trichopoda HOM05D006835 ORTHO05D008587 2.4e-105 386.3 342 100.0
CiPaw.06G113200 Carya illinoinensis HOM05D006835 ORTHO05D008587 1.4e-49 201.1 324 64.5
CsaV3_7G002240 Cucumis sativus L. HOM05D006835 ORTHO05D008587 2.9e-47 193.4 324 71.9
MELO3C015685.2 Cucumis melo HOM05D006835 ORTHO05D008587 5.0e-47 192.6 324 71.9
MBI15_g25631_MAGBIO Magnolia biondii HOM05D006835 ORTHO05D008587 1.5e-46 191.0 325 69.8
Dinv41853 Davidia involucrata HOM05D006835 ORTHO05D008587 1.9e-46 190.7 325 65.2
ClCG02G003170 Citrullus lanatus HOM05D006835 ORTHO05D008587 1.5e-43 181.0 326 70.9
Haze_01949 Corylus avellana HOM05D006835 ORTHO05D008587 1.7e-42 177.6 327 69.1
Duzib132G0412 Durio zibethinus HOM05D006835 ORTHO05D008587 1.1e-41 174.9 319 72.1
Sed0026152 Sechium edule HOM05D006835 ORTHO05D008587 2.7e-40 170.2 328 69.8
THA.LOC104806593 Tarenaya hassleriana HOM05D006835 ORTHO05D008587 7.8e-40 168.7 322 47.8
QL11p057002 Quercus lobata HOM05D006835 ORTHO05D008587 3.9e-39 166.4 319 71.2
TPR.G31217 Trifolium pratense HOM05D006835 ORTHO05D008587 3.9e-39 166.4 364 63.2
Medtr4g084630 Medicago truncatula HOM05D006835 ORTHO05D008587 5.0e-39 166.0 326 69.6
Manes.15G113100 Manihot esculenta HOM05D006835 ORTHO05D008587 6.6e-39 165.6 324 69.8
Oeu034382.1 Olea europaea HOM05D006835 ORTHO05D008587 1.9e-38 164.1 329 69.0
Sed0006636 Sechium edule HOM05D006835 ORTHO05D008587 1.9e-38 164.1 326 66.6
Sc08g0001990 Simmondsia chinensis HOM05D006835 ORTHO05D008587 2.5e-38 163.7 318 70.4
Thecc.02G149200 Theobroma cacao HOM05D006835 ORTHO05D008587 2.5e-38 163.7 325 71.1
Psat7g128400 Pisum sativum HOM05D006835 ORTHO05D008587 9.5e-38 161.8 323 69.0
Prupe.8G183100 Prunus persica HOM05D006835 ORTHO05D008587 1.2e-37 161.4 322 69.9
Gohir.A13G063900 Gossypium hirsutum HOM05D006835 ORTHO05D008587 2.8e-37 160.2 322 69.6
Rhsim12G0002300 Rhododendron simsii HOM05D006835 ORTHO05D008587 2.8e-37 160.2 324 70.1
CANSAT25G2962 Cannabis sativa HOM05D006835 ORTHO05D008587 3.6e-37 159.8 323 68.4
RcHm_v2.0_Chr6g0281661 Rosa chinensis HOM05D006835 ORTHO05D008587 3.6e-37 159.8 321 68.5
PGR042G3426 Punica granatum HOM05D006835 ORTHO05D008587 4.7e-37 159.5 328 67.4
CANSAT25G1616 Cannabis sativa HOM05D006835 ORTHO05D008587 8.0e-37 158.7 323 68.1
Gohir.D13G058000 Gossypium hirsutum HOM05D006835 ORTHO05D008587 2.3e-36 157.1 322 69.6
Potri.004G209400 Populus trichocarpa HOM05D006835 ORTHO05D008587 3.1e-36 156.8 323 68.1
FAN27G3385 Fragaria x ananassa HOM05D006835 ORTHO05D008587 4.0e-36 156.4 322 68.6
Ciclev10028825m.g Citrus clementina HOM05D006835 ORTHO05D008587 5.2e-36 156.0 325 69.5
Gorai.013G065400 Gossypium raimondii HOM05D006835 ORTHO05D008587 5.2e-36 156.0 322 69.3
FvH4_2g17170 Fragaria vesca HOM05D006835 ORTHO05D008587 6.8e-36 155.6 314 70.1
COL.COLO4_04808 Corchorus olitorius HOM05D006835 ORTHO05D008587 8.9e-36 155.2 325 68.9
MD10G1144800 Malus domestica HOM05D006835 ORTHO05D008587 1.5e-35 154.5 314 70.4
FAN24G3450 Fragaria x ananassa HOM05D006835 ORTHO05D008587 2.0e-35 154.1 322 68.3
SalBow8G5127 Salvia bowleyana HOM05D006835 ORTHO05D008587 2.0e-35 154.1 320 68.1
Lalb_Chr09g0328551 Lupinus albus HOM05D006835 ORTHO05D008587 9.8e-35 151.8 318 68.2
ECA247G0195 Erigeron canadensis HOM05D006835 ORTHO05D008587 2.9e-34 150.2 319 68.7
Nn6g31561 Nelumbo nucifera HOM05D006835 ORTHO05D008587 2.9e-34 150.2 328 67.4
Lj4g0005221 Lotus japonicus HOM05D006835 ORTHO05D008587 3.7e-34 149.8 321 67.9
Migut.E01343 Erythranthe guttata HOM05D006835 ORTHO05D008587 3.2e-33 146.7 326 66.9
Glyma.13G141500 Glycine max HOM05D006835 ORTHO05D008587 7.0e-33 145.6 324 67.6
Cc05_g09290 Coffea canephora HOM05D006835 ORTHO05D008587 9.2e-33 145.2 323 65.9
Sabra04G0141200 Salix brachista HOM05D006835 ORTHO05D008587 9.2e-33 145.2 323 66.9
TWI75G0734 Tripterygium wilfordii HOM05D006835 ORTHO05D008587 9.2e-33 145.2 319 69.3
Ca_18740_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 1.6e-32 144.4 323 66.9
Ca_30877_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 1.6e-32 144.4 323 66.9
Peaxi162Scf00078g00114 Petunia axillaris HOM05D006835 ORTHO05D008587 2.1e-32 144.1 323 66.9
TPR.G38303 Trifolium pratense HOM05D006835 ORTHO05D008587 2.1e-32 144.1 323 67.5
Actinidia17982 Actinidia chinensis HOM05D006835 ORTHO05D008587 6.0e-32 142.5 319 66.8
Hma1.2p1_0332F.1_g127850 Hydrangea macrophylla HOM05D006835 ORTHO05D008587 2.3e-31 140.6 321 67.0
AUR62013212 Chenopodium quinoa HOM05D006835 ORTHO05D008587 5.1e-31 139.4 320 66.6
AUR62010216 Chenopodium quinoa HOM05D006835 ORTHO05D008587 8.6e-31 138.7 320 66.6
Potri.009G170300 Populus trichocarpa HOM05D006835 ORTHO05D008587 1.1e-30 138.3 339 64.0
Lsat_1_v5_gn_1_20201 Lactuca sativa HOM05D006835 ORTHO05D008587 1.9e-30 137.5 325 65.2
unitig_744.g24691 Utricularia gibba HOM05D006835 ORTHO05D008587 2.5e-30 137.1 327 64.8
Aqoxy6G03057 Aquilegia oxysepala HOM05D006835 ORTHO05D008587 3.3e-30 136.7 321 66.7
GSVIVG01023845001 Vitis vinifera HOM05D006835 ORTHO05D008587 3.3e-30 136.7 326 66.0
EL10Ac9g21569 Beta vulgaris HOM05D006835 ORTHO05D008587 7.3e-30 135.6 321 65.7
arahy.Tifrunner.gnm1.ann1.9A9DF4 Arachis hypogaea HOM05D006835 ORTHO05D008587 1.2e-29 134.8 319 66.8
arahy.Tifrunner.gnm1.ann1.N15UBW Arachis hypogaea HOM05D006835 ORTHO05D008587 1.2e-29 134.8 319 66.8
Atru.chr5.3592 Acer truncatum HOM05D006835 ORTHO05D008587 1.6e-29 134.4 325 67.4
Hund06347 Selenicereus undatus HOM05D006835 ORTHO05D008587 1.6e-29 134.4 321 65.1
Eucgr.H05012 Eucalyptus grandis HOM05D006835 ORTHO05D008587 1.4e-28 131.3 328 64.9
Sp7g37590 Schrenkiella parvula HOM05D006835 ORTHO05D008587 1.4e-28 131.3 326 58.9
AL7G10060 Arabidopsis lyrata HOM05D006835 ORTHO05D008587 1.8e-28 131.0 325 59.1
CAN.G430.3 Capsicum annuum HOM05D006835 ORTHO05D008587 1.8e-28 131.0 318 65.7
PSO541G0957 Papaver somniferum HOM05D006835 ORTHO05D008587 1.8e-28 131.0 327 65.4
Cpa.g.sc60.7 Carica papaya HOM05D006835 ORTHO05D008587 2.3e-28 130.6 321 64.8
Aa31LG6G16920 Aethionema arabicum HOM05D006835 ORTHO05D008587 3.1e-28 130.2 322 59.0
Atru.BG.81.p Acer truncatum HOM05D006835 ORTHO05D008587 5.2e-28 129.4 311 69.1
SGA_v2.0_scaffold144G35876 Striga asiatica HOM05D006835 ORTHO05D008587 6.8e-28 129.0 322 66.5
Carub.0007s0005 Capsella rubella HOM05D006835 ORTHO05D008587 1.2e-27 128.3 327 59.6
Nitab4.5_0004387g0030 Nicotiana tabacum HOM05D006835 ORTHO05D008587 1.2e-27 128.3 322 66.1
Phvul.007G148200 Phaseolus vulgaris HOM05D006835 ORTHO05D008587 1.2e-27 128.3 323 64.7
DCAR_006210 Daucus carota HOM05D006835 ORTHO05D008587 1.5e-27 127.9 313 62.0
Sopen11g019950 Solanum pennellii HOM05D006835 ORTHO05D008587 1.5e-27 127.9 323 63.5
PGSC0003DMG400023133 Solanum tuberosum HOM05D006835 ORTHO05D008587 2.6e-27 127.1 323 63.2
Nitab4.5_0000079g0110 Nicotiana tabacum HOM05D006835 ORTHO05D008587 3.4e-27 126.7 322 65.8
arahy.Tifrunner.gnm1.ann1.ATV9YP Arachis hypogaea HOM05D006835 ORTHO05D008587 5.8e-27 125.9 319 66.5
Solyc11g044360.3 Solanum lycopersicum HOM05D006835 ORTHO05D008587 7.5e-27 125.6 315 64.1
Ah.01g010510 Amaranthus hybridus HOM05D006835 ORTHO05D008587 9.9e-27 125.2 326 63.8
arahy.Tifrunner.gnm1.ann1.B8P5ZC Arachis hypogaea HOM05D006835 ORTHO05D008587 9.9e-27 125.2 319 66.5
MD05G1145000 Malus domestica HOM05D006835 ORTHO05D008587 1.3e-26 124.8 302 69.9
Thhalv10004546m.g Eutrema salsugineum HOM05D006835 ORTHO05D008587 2.9e-26 123.6 325 58.2
MSTRG.1776 Avicennia marina HOM05D006835 ORTHO05D008587 3.7e-26 123.2 327 64.2
CARHR293940 Cardamine hirsuta HOM05D006835 ORTHO05D008587 4.9e-26 122.9 327 56.3
Lsat_1_v5_gn_8_70721 Lactuca sativa HOM05D006835 ORTHO05D008587 1.1e-25 121.7 314 65.3
TAR381G0995 Trochodendron aralioides HOM05D006835 ORTHO05D008587 1.9e-25 120.9 93 60.2
CSS0014591 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 3.2e-25 120.2 306 69.6
AT4G38160 Arabidopsis thaliana HOM05D006835 ORTHO05D008587 1.6e-24 117.9 325 62.2
Os08g0515800 Oryza sativa ssp. japonica HOM05D006835 ORTHO05D008587 2.7e-24 117.1 328 53.4
C07p46880 Brassica napus HOM05D006835 ORTHO05D008587 3.0e-23 113.6 322 60.2
BolC7t45204H Brassica oleracea HOM05D006835 ORTHO05D008587 3.0e-23 113.6 322 60.2
CDE04G0383 Ceratophyllum demersum HOM05D006835 ORTHO05D008587 3.9e-23 113.2 327 44.3
A03p48790 Brassica napus HOM05D006835 ORTHO05D008587 1.1e-22 111.7 322 60.2
BraA03t13979Z Brassica rapa HOM05D006835 ORTHO05D008587 1.1e-22 111.7 322 60.2
ClCG02G010730 Citrullus lanatus HOM05D006835 ORTHO05D008587 8.1e-21 105.5 292 38.0
Glyma.10G054400 Glycine max HOM05D006835 ORTHO05D008587 8.1e-21 105.5 293 68.6
SalBow3G3248 Salvia bowleyana HOM05D006835 ORTHO05D008587 1.5e-19 101.3 273 70.3
vmacro17000 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 9.9e-19 98.6 324 40.7
FAN15G1646 Fragaria x ananassa HOM05D006835 ORTHO05D008587 1.7e-18 97.8 73 61.6
Ah.02g121760 Amaranthus hybridus HOM05D006835 ORTHO05D008587 2.9e-18 97.1 295 47.1
VMungo1309G0603 Vigna mungo HOM05D006835 ORTHO05D008587 2.9e-18 97.1 72 61.1
SalBow4G0758 Salvia bowleyana HOM05D006835 ORTHO05D008587 4.9e-18 96.3 273 70.0
SalBow8G1833 Salvia bowleyana HOM05D006835 ORTHO05D008587 8.4e-18 95.5 70 61.4
CSS0013930 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 1.1e-17 95.1 65 63.1
SEGI_34779 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 1.1e-14 85.1 65 55.4
AagrBONN_evm.TU.Sc2ySwM_344.3279 Anthoceros agrestis HOM05D006835 ORTHO05D008587 4.3e-14 83.2 326 56.4
TAR381G1325 Trochodendron aralioides HOM05D006835 ORTHO05D008587 3.6e-13 80.1 57 59.6
Mapoly0015s0200 Marchantia polymorpha HOM05D006835 ORTHO05D008587 1.3e-10 71.6 84 42.9
SMO353G0202 Selaginella moellendorffii HOM05D006835 ORTHO05D001299 1.4e-09 68.2 124 51.6
HPP92_022026 Vanilla planifolia HOM05D006835 ORTHO05D008587 5.4e-09 66.2 58 48.3
vmacro17002 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 1.3e-07 61.6 99 42.4
FvH4_4g20570 Fragaria vesca HOM05D005956 ORTHO05D006468 3.0e-07 60.5 69 36.2
vmacro17159 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 3.0e-07 60.5 52 48.1
arahy.Tifrunner.gnm1.ann1.XHCR8J Arachis hypogaea HOM05D005956 ORTHO05D007197 3.9e-07 60.1 69 37.7
TPR.G21350 Trifolium pratense HOM05D005956 ORTHO05D007197 5.1e-07 59.7 68 38.2
arahy.Tifrunner.gnm1.ann1.12WCBU Arachis hypogaea HOM05D005956 ORTHO05D007197 1.5e-06 58.2 69 37.7
CBR_g26328 Chara braunii HOM05D002901 ORTHO05D003183 1.9e-06 57.8 73 38.4
SEGI_18890 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 1.9e-06 57.8 42 54.8
Nitab4.5_0005679g0020 Nicotiana tabacum HOM05D005956 ORTHO05D007197 2.5e-06 57.4 66 36.4
arahy.Tifrunner.gnm1.ann1.03KM4I Arachis hypogaea HOM05D005956 ORTHO05D007197 3.3e-06 57.0 69 36.2
LjContig00482g0022414 Lotus japonicus HOM05D005956 ORTHO05D007197 3.3e-06 57.0 63 39.7
Pp3c18_18510 Physcomitrium patens HOM05D005956 ORTHO05D007197 3.3e-06 57.0 65 40.0


User provided reference genes

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