Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0598G162 Amborella trichopoda HOM05D000545 ORTHO05D000539 7.0e-53 210.3 103 100.0
TAR636G3070 Trochodendron aralioides HOM05D000545 ORTHO05D000539 2.6e-23 112.1 102 55.9
MBI13_g29629_MAGBIO Magnolia biondii HOM05D000545 ORTHO05D000539 6.0e-20 100.9 84 60.7
Dinv04022 Davidia involucrata HOM05D000545 ORTHO05D000539 1.9e-18 95.9 86 57.0
MBI19_g17444_MAGBIO Magnolia biondii HOM05D000545 ORTHO05D000539 3.3e-18 95.1 90 53.3
TAR624G0895 Trochodendron aralioides HOM05D000545 ORTHO05D000539 5.6e-18 94.4 102 50.0
TAR383G0575 Trochodendron aralioides HOM05D000545 ORTHO05D000539 2.8e-17 92.0 90 54.4
CSS0005613 Camellia sinensis var. sinensis HOM05D000545 ORTHO05D000539 1.5e-15 86.3 86 51.2
ATR0829G142 Amborella trichopoda HOM05D000545 ORTHO05D000539 3.4e-15 85.1 98 51.0
PSO210G1397 Papaver somniferum HOM05D000545 ORTHO05D000539 2.9e-14 82.0 101 47.5
vmacro22214 Vaccinium macrocarpon HOM05D000545 ORTHO05D000539 8.4e-14 80.5 86 48.8
Rhsim08G0237000 Rhododendron simsii HOM05D000545 ORTHO05D000539 1.1e-13 80.1 86 48.8
Hma1.2p1_0291F.1_g115250 Hydrangea macrophylla HOM05D000545 ORTHO05D000539 1.4e-13 79.7 86 48.8
Cpa.g.sc25.96 Carica papaya HOM05D000545 ORTHO05D000539 7.1e-13 77.4 95 49.5
PSO063G1663 Papaver somniferum HOM05D000545 ORTHO05D000539 7.1e-13 77.4 90 47.8
Rhsim12G0208700 Rhododendron simsii HOM05D000545 ORTHO05D000539 9.3e-13 77.0 86 48.8
PSO210G7033 Papaver somniferum HOM05D000545 ORTHO05D000539 1.2e-12 76.6 100 47.0
PSO421G0626 Papaver somniferum HOM05D000545 ORTHO05D000539 2.1e-12 75.9 90 48.9
Lj5C39T4 Lonicera japonica HOM05D000545 ORTHO05D000539 6.0e-12 74.3 86 45.3
Thecc.06G117600 Theobroma cacao HOM05D000545 ORTHO05D000539 1.3e-11 73.2 95 48.4
Potri.006G145100 Populus trichocarpa HOM05D000545 ORTHO05D000539 6.6e-11 70.9 80 45.0
Thecc.09G081400 Theobroma cacao HOM05D000545 ORTHO05D000539 1.1e-10 70.1 86 43.0
Duzib160G0266 Durio zibethinus HOM05D000545 ORTHO05D000539 3.3e-10 68.6 90 47.8
vmacro17049 Vaccinium macrocarpon HOM05D000545 ORTHO05D000539 4.3e-10 68.2 86 46.5
Gorai.012G010900 Gossypium raimondii HOM05D000545 ORTHO05D000539 5.6e-10 67.8 93 49.5
Ca_01231_v3 Cicer arietinum L. HOM05D000545 ORTHO05D000539 1.3e-09 66.6 94 41.5
COL.COLO4_30783 Corchorus olitorius HOM05D000545 ORTHO05D000539 1.3e-09 66.6 95 47.4
QL02p061158 Quercus lobata HOM05D000545 ORTHO05D000539 1.3e-09 66.6 80 45.0
QL02p061202 Quercus lobata HOM05D000545 ORTHO05D000539 1.3e-09 66.6 80 45.0
QL02p061207 Quercus lobata HOM05D000545 ORTHO05D000539 1.3e-09 66.6 80 45.0
Aqoxy7G01100 Aquilegia oxysepala HOM05D000545 ORTHO05D000539 1.6e-09 66.2 88 44.3
Actinidia32173 Actinidia chinensis HOM05D000545 ORTHO05D000539 2.1e-09 65.9 88 45.5
GSVIVG01015120001 Vitis vinifera HOM05D000545 ORTHO05D000539 2.1e-09 65.9 65 50.8
Atru.chr7.1659 Acer truncatum HOM05D000545 ORTHO05D000539 6.2e-09 64.3 100 41.0
Dinv42365 Davidia involucrata HOM05D000545 ORTHO05D000539 8.1e-09 63.9 100 39.0
GSVIVG01016790001 Vitis vinifera HOM05D000545 ORTHO05D000539 1.1e-08 63.5 96 36.5
Sabra06G0114700 Salix brachista HOM05D000545 ORTHO05D000539 1.8e-08 62.8 80 41.2
Dinv25584 Davidia involucrata HOM05D000545 ORTHO05D000539 2.4e-08 62.4 106 39.6
Potri.018G064700 Populus trichocarpa HOM05D000545 ORTHO05D000539 4.0e-08 61.6 80 41.2
Duzib235G0161 Durio zibethinus HOM05D000545 ORTHO05D000539 5.3e-08 61.2 100 40.0
vmacro06313 Vaccinium macrocarpon HOM05D000545 ORTHO05D000539 5.3e-08 61.2 94 38.3
Atru.chr1.3899 Acer truncatum HOM05D000545 ORTHO05D000539 6.9e-08 60.8 86 44.2
CANSAT56G3172 Cannabis sativa HOM05D000545 ORTHO05D000539 9.0e-08 60.5 88 43.2
TWI79G1736 Tripterygium wilfordii HOM05D000545 ORTHO05D000539 1.5e-07 59.7 79 48.1
Gorai.011G057600 Gossypium raimondii HOM05D000545 ORTHO05D000539 2.0e-07 59.3 88 44.3
Gorai.009G143800 Gossypium raimondii HOM05D000545 ORTHO05D000539 3.4e-07 58.5 65 52.3
Prupe.3G043900 Prunus persica HOM05D000545 ORTHO05D000539 3.4e-07 58.5 96 40.6
THA.LOC104822660 Tarenaya hassleriana HOM05D000545 ORTHO05D000539 3.4e-07 58.5 71 49.3
Gohir.D10G054100 Gossypium hirsutum HOM05D000545 ORTHO05D000539 5.8e-07 57.8 88 43.2
Gohir.A10G052400 Gossypium hirsutum HOM05D000545 ORTHO05D000539 9.9e-07 57.0 88 44.3
Solyc08g062210.3 Solanum lycopersicum HOM05D000545 ORTHO05D000539 9.9e-07 57.0 96 37.5
Sopen08g017820 Solanum pennellii HOM05D000545 ORTHO05D000539 9.9e-07 57.0 96 37.5
Cc04_g01480 Coffea canephora HOM05D000545 ORTHO05D000539 1.3e-06 56.6 80 40.0
Duzib150G0566 Durio zibethinus HOM05D000545 ORTHO05D000539 2.9e-06 55.5 86 34.9
Eucgr.C00842 Eucalyptus grandis HOM05D000545 ORTHO05D000539 2.9e-06 55.5 100 36.0
Nn6g35581 Nelumbo nucifera HOM05D000545 ORTHO05D000539 2.9e-06 55.5 51 54.9
Lj7C682T15 Lonicera japonica HOM05D000545 ORTHO05D000539 3.8e-06 55.1 80 42.5
Manes.16G097900 Manihot esculenta HOM05D000545 ORTHO05D000539 6.4e-06 54.3 79 40.5
Nitab4.5_0006105g0020 Nicotiana tabacum HOM05D000545 ORTHO05D000539 8.4e-06 53.9 83 38.6
QL02p061167 Quercus lobata HOM05D000545 ORTHO05D000539 8.4e-06 53.9 60 48.3


User provided reference genes

Program Settings