Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0594G105 Amborella trichopoda HOM05D005745 ORTHO05D006857 1.6e-252 875.5 431 100.0
TAR367G0002 Trochodendron aralioides HOM05D005745 ORTHO05D006857 1.4e-70 271.2 222 62.2
Nn6g33496 Nelumbo nucifera HOM05D005745 ORTHO05D006857 1.3e-68 264.6 271 52.8
MBI17_g21972_MAGBIO Magnolia biondii HOM05D005745 ORTHO05D006857 2.9e-68 263.5 223 60.1
TPR.G39633 Trifolium pratense HOM05D005745 ORTHO05D006857 1.9e-67 260.8 220 60.5
Actinidia10034 Actinidia chinensis HOM05D005745 ORTHO05D006857 9.4e-67 258.5 220 58.2
CSS0038489 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 3.6e-66 256.5 221 57.0
Lalb_Chr04g0256771 Lupinus albus HOM05D005745 ORTHO05D006857 6.1e-66 255.8 228 55.3
Dinv43791 Davidia involucrata HOM05D005745 ORTHO05D006857 1.0e-65 255.0 220 57.7
PSO478G4474 Papaver somniferum HOM05D005745 ORTHO05D006857 1.8e-65 254.2 220 57.7
CSS0024424 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 3.0e-65 253.4 221 56.6
Actinidia20926 Actinidia chinensis HOM05D005745 ORTHO05D006857 5.2e-65 252.7 220 55.5
QL08p049437 Quercus lobata HOM05D005745 ORTHO05D006857 8.8e-65 251.9 253 52.2
VMungo0331G1900 Vigna mungo HOM05D005745 ORTHO05D006857 8.8e-65 251.9 220 59.1
GSVIVG01026870001 Vitis vinifera HOM05D005745 ORTHO05D006857 1.1e-64 251.5 258 53.5
Psat4g154320 Pisum sativum HOM05D005745 ORTHO05D006857 1.5e-64 251.1 220 58.6
Hma1.2p1_0001F.1_g001520 Hydrangea macrophylla HOM05D005745 ORTHO05D006857 2.6e-64 250.4 220 56.8
PSO782G5186 Papaver somniferum HOM05D005745 ORTHO05D006857 2.6e-64 250.4 220 55.9
EL10Ac1g00543 Beta vulgaris HOM05D005745 ORTHO05D006857 3.3e-64 250.0 224 57.6
Ciclev10020429m.g Citrus clementina HOM05D005745 ORTHO05D006857 3.3e-64 250.0 242 54.5
Ca_23656_v3 Cicer arietinum L. HOM05D005745 ORTHO05D006857 7.4e-64 248.8 225 58.2
FAN06G1549 Fragaria x ananassa HOM05D005745 ORTHO05D006857 2.8e-63 246.9 220 56.4
Medtr8g031440 Medicago truncatula HOM05D005745 ORTHO05D006857 2.8e-63 246.9 220 57.7
Sabra14G0059300 Salix brachista HOM05D005745 ORTHO05D006857 2.8e-63 246.9 219 56.2
AUR62033347 Chenopodium quinoa HOM05D005745 ORTHO05D006857 3.7e-63 246.5 222 57.2
FvH4_7g13861 Fragaria vesca HOM05D005745 ORTHO05D006857 4.8e-63 246.1 220 56.4
Lj3g0021692 Lotus japonicus HOM05D005745 ORTHO05D006857 4.8e-63 246.1 219 58.0
arahy.Tifrunner.gnm1.ann1.5YG8M2 Arachis hypogaea HOM05D005745 ORTHO05D006857 8.2e-63 245.4 219 56.6
arahy.Tifrunner.gnm1.ann1.JLYP5G Arachis hypogaea HOM05D005745 ORTHO05D006857 8.2e-63 245.4 219 57.1
CARHR000560 Cardamine hirsuta HOM05D005745 ORTHO05D006857 8.2e-63 245.4 270 50.4
Cpa.g.sc18.234 Carica papaya HOM05D005745 ORTHO05D006857 8.2e-63 245.4 218 57.3
Hund27291 Selenicereus undatus HOM05D005745 ORTHO05D006857 8.2e-63 245.4 220 56.4
Sopen05g028140 Solanum pennellii HOM05D005745 ORTHO05D006857 8.2e-63 245.4 236 54.7
MSTRG.17255 Avicennia marina HOM05D005745 ORTHO05D006857 1.1e-62 245.0 219 57.5
FAN10G4182 Fragaria x ananassa HOM05D005745 ORTHO05D006857 1.8e-62 244.2 220 55.5
AUR62033312 Chenopodium quinoa HOM05D005745 ORTHO05D006857 3.1e-62 243.4 222 56.8
Phvul.010G096200 Phaseolus vulgaris HOM05D005745 ORTHO05D006857 5.3e-62 242.7 229 55.0
vmacro13297 Vaccinium macrocarpon HOM05D005745 ORTHO05D006857 5.3e-62 242.7 224 55.8
Solyc05g048810.4 Solanum lycopersicum HOM05D005745 ORTHO05D006857 7.0e-62 242.3 236 54.2
SGA_v2.0_scaffold277G46666 Striga asiatica HOM05D005745 ORTHO05D006857 7.0e-62 242.3 219 57.1
Cc02_g37770 Coffea canephora HOM05D005745 ORTHO05D006857 9.1e-62 241.9 219 57.1
Thhalv10007725m.g Eutrema salsugineum HOM05D005745 ORTHO05D006857 1.6e-61 241.1 268 50.0
MD01G1055100 Malus domestica HOM05D005745 ORTHO05D006857 2.0e-61 240.7 248 50.8
Peaxi162Scf00191g01322 Petunia axillaris HOM05D005745 ORTHO05D006857 2.0e-61 240.7 220 54.5
Gohir.D12G109300 Gossypium hirsutum HOM05D005745 ORTHO05D006857 2.6e-61 240.4 220 56.4
Aqoxy7G00357 Aquilegia oxysepala HOM05D005745 ORTHO05D006857 3.5e-61 240.0 220 55.0
Gohir.A12G105400 Gossypium hirsutum HOM05D005745 ORTHO05D006857 3.5e-61 240.0 220 55.9
Gohir.A12G105450 Gossypium hirsutum HOM05D005745 ORTHO05D006857 3.5e-61 240.0 220 55.9
CAN.G1535.1 Capsicum annuum HOM05D005745 ORTHO05D006857 4.5e-61 239.6 219 56.2
ECA236G3051 Erigeron canadensis HOM05D005745 ORTHO05D006857 7.7e-61 238.8 218 56.9
BcaB03g13612 Brassica carinata HOM05D005745 ORTHO05D006857 1.0e-60 238.4 264 48.9
Gorai.008G118400 Gossypium raimondii HOM05D005745 ORTHO05D006857 1.3e-60 238.0 220 55.9
Manes.01G259400 Manihot esculenta HOM05D005745 ORTHO05D006857 1.7e-60 237.7 219 56.2
PGSC0003DMG400021653 Solanum tuberosum HOM05D005745 ORTHO05D006857 2.2e-60 237.3 219 55.7
Lsat_1_v5_gn_7_5060 Lactuca sativa HOM05D005745 ORTHO05D006857 2.9e-60 236.9 220 56.4
RcHm_v2.0_Chr1g0354081 Rosa chinensis HOM05D005745 ORTHO05D006857 5.0e-60 236.1 220 55.9
CANSAT56G0536 Cannabis sativa HOM05D005745 ORTHO05D006857 6.5e-60 235.7 271 50.9
Nitab4.5_0007346g0010 Nicotiana tabacum HOM05D005745 ORTHO05D006857 8.5e-60 235.3 238 53.4
Sp1g00540 Schrenkiella parvula HOM05D005745 ORTHO05D006857 8.5e-60 235.3 267 48.3
Sc26g0000960 Simmondsia chinensis HOM05D005745 ORTHO05D006857 1.9e-59 234.2 219 54.8
Lalb_Chr10g0097191 Lupinus albus HOM05D005745 ORTHO05D006857 3.2e-59 233.4 220 55.0
CiPaw.02G029400 Carya illinoinensis HOM05D005745 ORTHO05D006857 7.2e-59 232.3 255 49.4
DCAR_015932 Daucus carota HOM05D005745 ORTHO05D006857 7.2e-59 232.3 220 55.0
Carub.0001s0045 Capsella rubella HOM05D005745 ORTHO05D006857 1.6e-58 231.1 218 55.0
Aa31LG1G11130 Aethionema arabicum HOM05D005745 ORTHO05D006857 2.1e-58 230.7 227 55.1
CsaV3_6G000430 Cucumis sativus L. HOM05D005745 ORTHO05D006857 2.1e-58 230.7 224 54.0
AL1G10580 Arabidopsis lyrata HOM05D005745 ORTHO05D006857 2.7e-58 230.3 218 56.0
C05p00290 Brassica napus HOM05D005745 ORTHO05D006857 3.6e-58 229.9 268 47.0
TWI23G0914 Tripterygium wilfordii HOM05D005745 ORTHO05D006857 4.7e-58 229.6 285 47.0
A10p00280 Brassica napus HOM05D005745 ORTHO05D006857 1.4e-57 228.0 276 46.7
MBI18_g01486_MAGBIO Magnolia biondii HOM05D005745 ORTHO05D006857 8.8e-57 225.3 237 51.5
BolC5t28819H Brassica oleracea HOM05D005745 ORTHO05D006857 1.2e-56 224.9 274 46.4
BraA10t42305Z Brassica rapa HOM05D005745 ORTHO05D006857 2.6e-56 223.8 217 54.4
Zm00001eb420790 Zea mays HOM05D005745 ORTHO05D006857 3.4e-56 223.4 222 50.9
AUR62004330 Chenopodium quinoa HOM05D005745 ORTHO05D006857 5.7e-56 222.6 225 53.3
Rhsim07G0017300 Rhododendron simsii HOM05D000683 ORTHO05D000507 7.5e-56 222.2 214 53.7
Eucgr.E00169 Eucalyptus grandis HOM05D005745 ORTHO05D006857 1.3e-55 221.5 234 48.3
PGR042G0923 Punica granatum HOM05D005745 ORTHO05D006857 2.8e-55 220.3 220 53.6
Oeu056358.1 Olea europaea HOM05D005745 ORTHO05D006857 6.3e-55 219.2 187 61.5
CiPaw.02G029100 Carya illinoinensis HOM05D005745 ORTHO05D006857 1.1e-54 218.4 255 47.5
THA.LOC104817020 Tarenaya hassleriana HOM05D005745 ORTHO05D006857 1.1e-54 218.4 192 58.9
Eucgr.E00173 Eucalyptus grandis HOM05D005745 ORTHO05D006857 1.4e-54 218.0 234 48.3
Haze_15472 Corylus avellana HOM05D005745 ORTHO05D006857 1.8e-54 217.6 188 59.6
AUR62003100 Chenopodium quinoa HOM05D005745 ORTHO05D006857 5.4e-54 216.1 186 60.2
Zm00001eb067600 Zea mays HOM05D005745 ORTHO05D006857 1.6e-53 214.5 223 49.3
AT1G01760 Arabidopsis thaliana HOM05D005745 ORTHO05D006857 2.7e-53 213.8 186 59.7
ClCG06G003860 Citrullus lanatus HOM05D005745 ORTHO05D006857 2.7e-53 213.8 193 58.0
Cfa003949 Carpinus fangiana HOM05D000683 ORTHO05D000507 7.7e-53 212.2 230 50.9
Mapoly0023s0060 Marchantia polymorpha HOM05D005745 ORTHO05D006857 6.5e-52 209.1 256 44.1
AUR62034353 Chenopodium quinoa HOM05D005745 ORTHO05D006857 1.6e-50 204.5 187 58.3
Ah.05g176680 Amaranthus hybridus HOM05D005745 ORTHO05D006857 4.7e-50 203.0 205 54.1
Potri.014G081400 Populus trichocarpa HOM05D005745 ORTHO05D006857 1.5e-48 198.0 156 61.5
Lj7C516G5 Lonicera japonica HOM05D005745 ORTHO05D006857 3.4e-48 196.8 159 61.6
Sed0009525 Sechium edule HOM05D005745 ORTHO05D006857 3.4e-48 196.8 163 60.1
Duzib138G1514 Durio zibethinus HOM05D005745 ORTHO05D006857 1.3e-47 194.9 159 61.0
Glyma.03G013600 Glycine max HOM05D005745 ORTHO05D006857 4.9e-47 193.0 219 49.3
HanXRQChr04g0121611 Helianthus annuus HOM05D005745 ORTHO05D006857 3.1e-46 190.3 161 60.2
Nitab4.5_0002262g0010 Nicotiana tabacum HOM05D005745 ORTHO05D006857 3.1e-46 190.3 188 53.2
CDE06G1611 Ceratophyllum demersum HOM05D005745 ORTHO05D006857 4.1e-46 189.9 221 47.1
Zm00001eb191880 Zea mays HOM05D009386 ORTHO05D006857 5.0e-44 183.0 229 44.1
HPP92_001499 Vanilla planifolia HOM05D005745 ORTHO05D006857 1.1e-43 181.8 185 52.4
unitig_26.g9734 Utricularia gibba HOM05D005745 ORTHO05D006857 1.9e-43 181.0 163 58.3
Atru.BG.56.p Acer truncatum HOM05D005745 ORTHO05D006857 7.2e-43 179.1 165 56.4
CiPaw.02G029200 Carya illinoinensis HOM05D005745 ORTHO05D006857 2.3e-41 174.1 197 50.3
AagrBONN_evm.TU.Sc2ySwM_362.160 Anthoceros agrestis HOM05D005745 ORTHO05D006857 6.8e-41 172.6 169 51.5
MELO3C021221.2 Cucumis melo HOM05D005745 ORTHO05D006857 5.7e-40 169.5 187 50.3
SMO266G0032 Selaginella moellendorffii HOM05D005745 ORTHO05D006857 6.3e-39 166.0 212 43.4
FAN03G1898 Fragaria x ananassa HOM05D005745 ORTHO05D006857 1.1e-38 165.2 220 42.3
SEGI_32011 Sequoiadendron giganteum HOM05D005745 ORTHO05D006857 4.1e-38 163.3 195 46.2
ATR0594G209 Amborella trichopoda HOM05D005745 ORTHO05D006857 1.6e-37 161.4 99 80.8
Pp3c4_14060 Physcomitrium patens HOM05D005745 ORTHO05D006857 4.6e-37 159.8 261 37.5
Zm00001eb442120 Zea mays HOM05D009386 ORTHO05D006857 5.4e-30 136.3 143 51.7
Glyma.07G073300 Glycine max HOM05D005745 ORTHO05D006857 9.2e-30 135.6 118 57.6
Prupe.2G164800 Prunus persica HOM05D005745 ORTHO05D006857 1.0e-28 132.1 120 54.2
Os04g0683500 Oryza sativa ssp. japonica HOM05D005745 ORTHO05D006857 1.5e-27 128.3 119 51.3
AUR62034238 Chenopodium quinoa HOM05D002177 ORTHO05D002257 4.3e-27 126.7 154 45.5
Atru.chr5.475 Acer truncatum HOM05D005745 ORTHO05D006857 1.4e-25 121.7 98 60.2
AUR62019766 Chenopodium quinoa HOM05D005745 ORTHO05D006857 3.1e-25 120.6 112 57.1
CBR_g12518 Chara braunii HOM05D004914 ORTHO05D006512 5.8e-24 116.3 351 27.4
FAN06G0933 Fragaria x ananassa HOM05D005745 ORTHO05D006857 8.3e-23 112.5 92 58.7
MD07G1140200 Malus domestica HOM05D005745 ORTHO05D006857 1.6e-21 108.2 92 55.4
SEGI_32349 Sequoiadendron giganteum HOM05D005745 ORTHO05D006857 3.0e-20 104.0 102 53.9
Prupe.2G165000 Prunus persica HOM05D005745 ORTHO05D006857 1.6e-18 98.2 220 30.9
PRCOL_00000230 Prasinoderma coloniale HOM05D005745 ORTHO05D006857 4.0e-17 93.6 176 35.2
COL.COLO4_12683 Corchorus olitorius HOM05D000683 ORTHO05D000507 3.4e-16 90.5 139 40.3
Prupe.2G164500 Prunus persica HOM05D005745 ORTHO05D006857 3.4e-16 90.5 81 54.3
MCO02G004 Micromonas commoda HOM05D005745 ORTHO05D006857 7.1e-14 82.8 204 32.8
Cre14.g629283 Chlamydomonas reinhardtii HOM05D005745 ORTHO05D006857 5.1e-12 76.6 62 58.1
SHI13462 Sapria himalayana HOM05D005745 ORTHO05D006857 9.6e-11 72.4 195 31.3
Thecc.01G362500 Theobroma cacao HOM05D005745 ORTHO05D006857 2.6e-08 64.3 34 79.4
MCO15G493 Micromonas commoda HOM05D005745 ORTHO05D006857 2.4e-06 57.8 46 45.7


User provided reference genes

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