Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0317G081 Amborella trichopoda HOM05D006131 ORTHO05D064775 2.7e-88 328.6 157 100.0
ATR0317G053 Amborella trichopoda HOM05D006131 ORTHO05D008649 2.3e-71 272.3 131 96.2
Peaxi162Scf00178g00056 Petunia axillaris HOM05D006131 ORTHO05D008649 3.7e-53 211.8 132 75.0
TAR627G0028 Trochodendron aralioides HOM05D006131 ORTHO05D008649 6.3e-53 211.1 132 75.0
Nn7g38008 Nelumbo nucifera HOM05D006131 ORTHO05D008649 1.8e-52 209.5 132 75.0
COL.COLO4_31819 Corchorus olitorius HOM05D006131 ORTHO05D008649 5.3e-52 208.0 132 72.0
Duzib235G1477 Durio zibethinus HOM05D006131 ORTHO05D008649 5.3e-52 208.0 160 63.1
GSVIVG01012668001 Vitis vinifera HOM05D006131 ORTHO05D008649 9.1e-52 207.2 133 75.9
CiPaw.09G096900 Carya illinoinensis HOM05D006131 ORTHO05D008649 2.6e-51 205.7 137 73.0
PSO541G3086 Papaver somniferum HOM05D006131 ORTHO05D008649 2.6e-51 205.7 133 73.7
Sopen02g025670 Solanum pennellii HOM05D006131 ORTHO05D008649 2.6e-51 205.7 158 65.2
Solyc02g080990.2 Solanum lycopersicum HOM05D006131 ORTHO05D008649 3.4e-51 205.3 158 64.6
Aqoxy1G03037 Aquilegia oxysepala HOM05D006131 ORTHO05D008649 4.5e-51 204.9 132 74.2
QL05p072288 Quercus lobata HOM05D006131 ORTHO05D008649 5.9e-51 204.5 132 71.2
Ah.09g234600 Amaranthus hybridus HOM05D006131 ORTHO05D008649 7.7e-51 204.1 156 64.1
Nitab4.5_0004743g0170 Nicotiana tabacum HOM05D006131 ORTHO05D008649 1.3e-50 203.4 132 72.0
Aqoxy1G02667 Aquilegia oxysepala HOM05D006131 ORTHO05D008649 1.7e-50 203.0 134 73.9
Aqoxy2G02318 Aquilegia oxysepala HOM05D006131 ORTHO05D008649 1.7e-50 203.0 134 73.9
Psat4g005600 Pisum sativum HOM05D006131 ORTHO05D008649 1.7e-50 203.0 161 64.0
Sc17g0007540 Simmondsia chinensis HOM05D006131 ORTHO05D008649 2.2e-50 202.6 132 71.2
vmacro03670 Vaccinium macrocarpon HOM05D006131 ORTHO05D008649 2.2e-50 202.6 150 65.3
TPR.G36994 Trifolium pratense HOM05D006131 ORTHO05D008649 2.9e-50 202.2 161 63.4
CSS0011000 Camellia sinensis var. sinensis HOM05D006131 ORTHO05D008649 5.0e-50 201.4 132 72.0
Nitab4.5_0001409g0150 Nicotiana tabacum HOM05D006131 ORTHO05D008649 6.5e-50 201.1 132 71.2
EL10Ac8g20116 Beta vulgaris HOM05D006131 ORTHO05D008649 8.5e-50 200.7 156 62.8
Oeu051199.1 Olea europaea HOM05D006131 ORTHO05D008649 8.5e-50 200.7 132 72.0
CDE04G1529 Ceratophyllum demersum HOM05D006131 ORTHO05D008649 1.1e-49 200.3 132 71.2
Lj4g0011530 Lotus japonicus HOM05D006131 ORTHO05D008649 1.1e-49 200.3 157 63.1
AUR62021912 Chenopodium quinoa HOM05D006131 ORTHO05D008649 1.4e-49 199.9 156 64.1
Medtr4g132500 Medicago truncatula HOM05D006131 ORTHO05D008649 1.4e-49 199.9 161 63.4
Hma1.2p1_0298F.1_g117540 Hydrangea macrophylla HOM05D006131 ORTHO05D008649 1.9e-49 199.5 131 69.5
Hma1.2p1_0298F.1_g117550 Hydrangea macrophylla HOM05D006131 ORTHO05D008649 1.9e-49 199.5 131 69.5
Ca_21065_v3 Cicer arietinum L. HOM05D006131 ORTHO05D008649 2.5e-49 199.1 161 62.7
Glyma.07G263100 Glycine max HOM05D006131 ORTHO05D008649 2.5e-49 199.1 155 62.6
HanXRQChr16g0516961 Helianthus annuus HOM05D006131 ORTHO05D008649 2.5e-49 199.1 131 71.8
Lj1C1234T13 Lonicera japonica HOM05D006131 ORTHO05D008649 2.5e-49 199.1 132 71.2
Thecc.06G226400 Theobroma cacao HOM05D006131 ORTHO05D008649 2.5e-49 199.1 132 71.2
Gohir.D06G156700 Gossypium hirsutum HOM05D006131 ORTHO05D008649 4.2e-49 198.4 132 70.5
Gorai.010G183100 Gossypium raimondii HOM05D006131 ORTHO05D008649 4.2e-49 198.4 132 70.5
MD10G1325600 Malus domestica HOM05D006131 ORTHO05D008649 4.2e-49 198.4 132 71.2
AUR62012745 Chenopodium quinoa HOM05D006131 ORTHO05D008649 5.5e-49 198.0 156 64.1
Hund21429 Selenicereus undatus HOM05D006131 ORTHO05D008649 5.5e-49 198.0 156 63.5
Cpa.g.sc152.47 Carica papaya HOM05D006131 ORTHO05D008649 7.2e-49 197.6 158 62.0
ClCG01G021720 Citrullus lanatus HOM05D006131 ORTHO05D008649 7.2e-49 197.6 132 72.0
CsaV3_6G048760 Cucumis sativus L. HOM05D006131 ORTHO05D008649 9.4e-49 197.2 132 72.7
DCAR_028357 Daucus carota HOM05D006131 ORTHO05D008649 9.4e-49 197.2 141 63.8
ECA234G4389 Erigeron canadensis HOM05D000006 ORTHO05D000091 9.4e-49 197.2 131 70.2
arahy.Tifrunner.gnm1.ann1.34DY78 Arachis hypogaea HOM05D006131 ORTHO05D008649 1.2e-48 196.8 161 61.5
Cc09_g01330 Coffea canephora HOM05D006131 ORTHO05D008649 2.1e-48 196.1 156 61.5
Gohir.A06G150500 Gossypium hirsutum HOM05D006131 ORTHO05D008649 2.1e-48 196.1 132 69.7
Prupe.4G016400 Prunus persica HOM05D006131 ORTHO05D008649 2.1e-48 196.1 132 70.5
Sabra11G0007600 Salix brachista HOM05D006131 ORTHO05D008649 2.1e-48 196.1 156 60.9
SEGI_37859 Sequoiadendron giganteum HOM05D006131 ORTHO05D008649 2.1e-48 196.1 132 70.5
Phvul.003G081300 Phaseolus vulgaris HOM05D006131 ORTHO05D008649 2.7e-48 195.7 155 61.9
Potri.011G009600 Populus trichocarpa HOM05D006131 ORTHO05D008649 2.7e-48 195.7 132 68.2
TWI38G1228 Tripterygium wilfordii HOM05D006131 ORTHO05D008649 3.6e-48 195.3 132 69.7
VMungo1215G1261 Vigna mungo HOM05D006131 ORTHO05D008649 3.6e-48 195.3 155 61.9
Actinidia02346 Actinidia chinensis HOM05D006131 ORTHO05D008649 4.6e-48 194.9 133 69.9
arahy.Tifrunner.gnm1.ann1.EVIY4K Arachis hypogaea HOM05D006131 ORTHO05D008649 4.6e-48 194.9 161 60.9
RcHm_v2.0_Chr5g0002381 Rosa chinensis HOM05D006131 ORTHO05D008649 4.6e-48 194.9 141 66.0
unitig_748.g7594 Utricularia gibba HOM05D006131 ORTHO05D008649 6.1e-48 194.5 135 68.1
Rhsim13G0150700 Rhododendron simsii HOM05D006131 ORTHO05D008649 7.9e-48 194.1 134 70.9
Ciclev10014171m.g Citrus clementina HOM05D006131 ORTHO05D008649 1.0e-47 193.7 132 68.9
SGA_v2.0_scaffold7G03775 Striga asiatica HOM05D006131 ORTHO05D008649 1.0e-47 193.7 130 70.0
Migut.M01378 Erythranthe guttata HOM05D006131 ORTHO05D008649 1.4e-47 193.4 132 70.5
Eucgr.E03997 Eucalyptus grandis HOM05D006131 ORTHO05D008649 1.4e-47 193.4 133 67.7
CANSAT56G3890 Cannabis sativa HOM05D006131 ORTHO05D008649 1.8e-47 193.0 137 70.1
FvH4_3g01570 Fragaria vesca HOM05D006131 ORTHO05D008649 5.1e-47 191.4 132 69.7
Lalb_Chr07g0177101 Lupinus albus HOM05D006131 ORTHO05D008649 5.1e-47 191.4 161 59.0
PGR042G2674 Punica granatum HOM05D006131 ORTHO05D008649 6.7e-47 191.0 132 65.9
Zm00001eb334790 Zea mays HOM05D006131 ORTHO05D008649 1.5e-46 189.9 131 66.4
AagrBONN_evm.TU.Sc2ySwM_362.2691 Anthoceros agrestis HOM05D006131 ORTHO05D008649 2.6e-46 189.1 132 65.9
Carub.0006s3219 Capsella rubella HOM05D006131 ORTHO05D008649 2.6e-46 189.1 156 59.0
Cfa000174 Carpinus fangiana HOM05D006131 ORTHO05D008649 2.6e-46 189.1 132 68.9
Manes.17G028300 Manihot esculenta HOM05D006131 ORTHO05D008649 3.3e-46 188.7 133 67.7
Haze_06845 Corylus avellana HOM05D006131 ORTHO05D008649 4.4e-46 188.3 132 68.9
Thhalv10028396m.g Eutrema salsugineum HOM05D006131 ORTHO05D008649 4.4e-46 188.3 156 59.6
FAN25G2733 Fragaria x ananassa HOM05D006131 ORTHO05D008649 4.4e-46 188.3 132 68.9
Os01g0120300 Oryza sativa ssp. japonica HOM05D006131 ORTHO05D008649 4.4e-46 188.3 131 64.9
AT4G04350 Arabidopsis thaliana HOM05D006131 ORTHO05D008649 5.7e-46 188.0 156 59.0
Dinv20096 Davidia involucrata HOM05D006131 ORTHO05D008649 5.7e-46 188.0 123 72.4
CAN.G1014.35 Capsicum annuum HOM05D006131 ORTHO05D008649 7.4e-46 187.6 128 70.3
Sp6g04490 Schrenkiella parvula HOM05D006131 ORTHO05D008649 9.7e-46 187.2 156 59.6
BolC3t15934H Brassica oleracea HOM05D006131 ORTHO05D008649 2.2e-45 186.0 155 58.7
Atru.chr10.2271 Acer truncatum HOM05D000321 ORTHO05D008649 2.8e-45 185.7 131 69.5
A03p29960 Brassica napus HOM05D006131 ORTHO05D008649 2.8e-45 185.7 155 58.7
BraA03t12185Z Brassica rapa HOM05D006131 ORTHO05D008649 2.8e-45 185.7 155 58.7
Sed0009561 Sechium edule HOM05D006131 ORTHO05D008649 2.8e-45 185.7 132 68.9
THA.LOC104806315 Tarenaya hassleriana HOM05D006131 ORTHO05D008649 2.8e-45 185.7 141 60.3
Aa31LG9G9850 Aethionema arabicum HOM05D006131 ORTHO05D008649 1.4e-44 183.3 157 56.1
C03p36250 Brassica napus HOM05D006131 ORTHO05D008649 1.4e-44 183.3 155 58.1
AL6G47890 Arabidopsis lyrata HOM05D006131 ORTHO05D008649 2.4e-44 182.6 156 57.7
AL6G47902 Arabidopsis lyrata HOM05D006131 ORTHO05D008649 2.4e-44 182.6 156 57.7
CARHR253090 Cardamine hirsuta HOM05D006131 ORTHO05D008649 3.1e-44 182.2 147 59.9
MD05G1351100 Malus domestica HOM05D006131 ORTHO05D008649 2.6e-43 179.1 131 65.6
Mapoly0024s0038 Marchantia polymorpha HOM05D006131 ORTHO05D008649 6.5e-42 174.5 132 59.8
Pp3c7_13710 Physcomitrium patens HOM05D006131 ORTHO05D008649 1.4e-41 173.3 132 64.4
Lsat_1_v5_gn_4_61541 Lactuca sativa HOM05D006131 ORTHO05D008649 2.5e-41 172.6 163 52.8
CSS0007614 Camellia sinensis var. sinensis HOM05D006131 ORTHO05D008649 4.7e-40 168.3 126 64.3
HPP92_003825 Vanilla planifolia HOM05D006131 ORTHO05D008649 9.7e-38 160.6 131 59.5
CBR_g51980 Chara braunii HOM05D006131 ORTHO05D008649 2.8e-37 159.1 133 54.9
SalBow8G4181 Salvia bowleyana HOM05D006131 ORTHO05D008649 3.7e-37 158.7 132 58.3
MELO3C007414.2 Cucumis melo HOM05D006131 ORTHO05D008649 4.1e-36 155.2 116 69.0
MCO01G222 Micromonas commoda HOM05D006131 ORTHO05D008649 2.0e-35 152.9 158 49.4
Cre13.g578451 Chlamydomonas reinhardtii HOM05D006131 ORTHO05D008649 3.8e-34 148.7 132 55.3
PRCOL_00006602 Prasinoderma coloniale HOM05D006131 ORTHO05D008649 4.0e-31 138.7 138 50.0
Glyma.17G010750 Glycine max HOM05D006131 ORTHO05D008649 8.2e-29 131.0 84 69.0
BcaB01g02598 Brassica carinata HOM05D006131 ORTHO05D008649 2.9e-26 122.5 124 50.0
Lj1A1234T51 Lonicera japonica HOM05D006131 ORTHO05D008649 2.3e-23 112.8 129 48.1
Aqoxy144s008 Aquilegia oxysepala HOM05D006131 ORTHO05D077905 3.1e-20 102.4 135 40.0
Cfa023421 Carpinus fangiana HOM05D006131 ORTHO05D123919 2.0e-14 83.2 143 35.7


User provided reference genes

Program Settings