Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0188G025 Amborella trichopoda HOM05D000288 ORTHO05D000173 4.3e-57 224.6 122 100.0
Aqoxy7G00113 Aquilegia oxysepala HOM05D000288 ORTHO05D000173 1.7e-13 79.7 92 52.2
FvH4_7g16180 Fragaria vesca HOM05D000288 ORTHO05D000173 5.4e-12 74.7 89 50.6
Peaxi162Scf00786g00438 Petunia axillaris HOM05D000288 ORTHO05D000173 5.4e-12 74.7 106 44.3
FAN10G2992 Fragaria x ananassa HOM05D000288 ORTHO05D000173 7.1e-12 74.3 101 51.5
Solyc01g095650.4 Solanum lycopersicum HOM05D000288 ORTHO05D000173 9.3e-12 73.9 101 47.5
FAN06G2471 Fragaria x ananassa HOM05D000288 ORTHO05D000173 1.2e-11 73.6 88 51.1
FAN06G4844 Fragaria x ananassa HOM05D000288 ORTHO05D000173 1.2e-11 73.6 88 51.1
Oeu007904.1 Olea europaea HOM05D001772 ORTHO05D005958 1.2e-11 73.6 83 54.2
Sopen01g039400 Solanum pennellii HOM05D000288 ORTHO05D000173 1.2e-11 73.6 101 46.5
FAN01G1464 Fragaria x ananassa HOM05D000288 ORTHO05D000173 1.6e-11 73.2 88 52.3
QL04p056729 Quercus lobata HOM05D000288 ORTHO05D000173 1.6e-11 73.2 85 50.6
FAN03G0085 Fragaria x ananassa HOM05D000288 ORTHO05D000173 2.1e-11 72.8 88 52.3
Phvul.010G112000 Phaseolus vulgaris HOM05D000288 ORTHO05D000173 2.1e-11 72.8 60 56.7
Lj6g0000112 Lotus japonicus HOM05D000288 ORTHO05D000173 2.7e-11 72.4 116 41.4
arahy.Tifrunner.gnm1.ann1.TEE0AU Arachis hypogaea HOM05D000288 ORTHO05D000173 3.5e-11 72.0 63 55.6
Cfa003821 Carpinus fangiana HOM05D000288 ORTHO05D000173 3.5e-11 72.0 78 50.0
FAN10G0982 Fragaria x ananassa HOM05D000288 ORTHO05D000173 3.5e-11 72.0 69 60.9
RcHm_v2.0_Chr1g0359181 Rosa chinensis HOM05D000288 ORTHO05D000173 4.6e-11 71.6 65 58.5
GSVIVG01027073001 Vitis vinifera HOM05D000288 ORTHO05D000173 4.6e-11 71.6 115 43.5
Nn1g01832 Nelumbo nucifera HOM05D000288 ORTHO05D000173 6.0e-11 71.2 119 44.5
Cc02_g39140 Coffea canephora HOM05D000288 ORTHO05D000173 7.9e-11 70.9 79 50.6
CDE08G0519 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 1.0e-10 70.5 103 46.6
Glyma.07G057300 Glycine max HOM05D000288 ORTHO05D000173 1.0e-10 70.5 58 56.9
SEGI_01711 Sequoiadendron giganteum HOM05D000288 ORTHO05D000173 1.0e-10 70.5 88 51.1
Aqoxy7G00135 Aquilegia oxysepala HOM05D000288 ORTHO05D000173 1.3e-10 70.1 62 61.3
arahy.Tifrunner.gnm1.ann1.KL1Z6U Arachis hypogaea HOM05D000288 ORTHO05D000173 1.3e-10 70.1 63 54.0
unitig_699.g19799 Utricularia gibba HOM05D000288 ORTHO05D000173 1.3e-10 70.1 61 55.7
Actinidia20228 Actinidia chinensis HOM05D000288 ORTHO05D000173 1.8e-10 69.7 107 43.0
TAR375G0671 Trochodendron aralioides HOM05D000288 ORTHO05D000173 1.8e-10 69.7 117 42.7
MSTRG.28251 Avicennia marina HOM05D000288 ORTHO05D000173 2.3e-10 69.3 83 50.6
Manes.05G024800 Manihot esculenta HOM05D000288 ORTHO05D000173 2.3e-10 69.3 83 49.4
Potri.014G096400 Populus trichocarpa HOM05D000288 ORTHO05D000173 2.3e-10 69.3 109 42.2
SalBow5G2634 Salvia bowleyana HOM05D000288 ORTHO05D000173 2.3e-10 69.3 68 52.9
SEGI_14612 Sequoiadendron giganteum HOM05D000288 ORTHO05D000173 2.3e-10 69.3 74 55.4
vmacro13175 Vaccinium macrocarpon HOM05D000288 ORTHO05D000173 2.3e-10 69.3 112 42.9
Nn3g19053 Nelumbo nucifera HOM05D000288 ORTHO05D000173 3.9e-10 68.6 114 43.9
TPR.G22935 Trifolium pratense HOM05D000288 ORTHO05D000173 3.9e-10 68.6 91 50.5
Haze_15632 Corylus avellana HOM05D000288 ORTHO05D000173 5.1e-10 68.2 77 48.1
Mapoly0089s0012 Marchantia polymorpha HOM05D000288 ORTHO05D000173 5.1e-10 68.2 92 47.8
Actinidia28499 Actinidia chinensis HOM05D001772 ORTHO05D005958 6.7e-10 67.8 60 56.7
Migut.N01557 Erythranthe guttata HOM05D000288 ORTHO05D000173 6.7e-10 67.8 88 46.6
VMungo1215G0249 Vigna mungo HOM05D000288 ORTHO05D000173 1.1e-09 67.0 82 47.6
Cre02.g104800 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 1.5e-09 66.6 104 42.3
SMO116G0115 Selaginella moellendorffii HOM05D000288 ORTHO05D000173 1.5e-09 66.6 58 56.9
SGA_v2.0_scaffold203G41505 Striga asiatica HOM05D000288 ORTHO05D000173 1.5e-09 66.6 108 44.4
Glyma.16G026300 Glycine max HOM05D000288 ORTHO05D000173 1.9e-09 66.2 104 40.4
CAN.G986.29 Capsicum annuum HOM05D000288 ORTHO05D000173 2.5e-09 65.9 60 53.3
DCAR_025246 Daucus carota HOM05D000288 ORTHO05D000173 2.5e-09 65.9 90 48.9
MD07G1147400 Malus domestica HOM05D000288 ORTHO05D000173 2.5e-09 65.9 103 41.7
CiPaw.01G074200 Carya illinoinensis HOM05D000288 ORTHO05D000173 3.3e-09 65.5 108 44.4
Eucgr.D00189 Eucalyptus grandis HOM05D000288 ORTHO05D000173 3.3e-09 65.5 80 50.0
CANSAT56G0699 Cannabis sativa HOM05D000288 ORTHO05D000173 4.3e-09 65.1 117 37.6
Nitab4.5_0011592g0030 Nicotiana tabacum HOM05D000288 ORTHO05D000173 5.6e-09 64.7 62 53.2
TWI59G1211 Tripterygium wilfordii HOM05D000288 ORTHO05D000173 5.6e-09 64.7 66 56.1
Lalb_Chr17g0342471 Lupinus albus HOM05D000288 ORTHO05D000173 7.4e-09 64.3 88 42.0
Atru.chr5.642 Acer truncatum HOM05D000288 ORTHO05D000173 9.6e-09 63.9 111 44.1
Os05g0489800 Oryza sativa ssp. japonica HOM05D000288 ORTHO05D000173 9.6e-09 63.9 122 41.0
HPP92_024201 Vanilla planifolia HOM05D000288 ORTHO05D000173 1.3e-08 63.5 89 44.9
Migut.B01088 Erythranthe guttata HOM05D000288 ORTHO05D000173 1.6e-08 63.2 109 42.2
PSO478G3390 Papaver somniferum HOM05D000288 ORTHO05D000173 1.6e-08 63.2 90 41.1
PGSC0003DMG400000213 Solanum tuberosum HOM05D000288 ORTHO05D000173 1.6e-08 63.2 77 48.1
CARHR001070 Cardamine hirsuta HOM05D000288 ORTHO05D000173 2.1e-08 62.8 84 51.2
MELO3C028752.2 Cucumis melo HOM05D000288 ORTHO05D000173 2.1e-08 62.8 61 55.7
CsaV3_7G025320 Cucumis sativus L. HOM05D000288 ORTHO05D000173 2.1e-08 62.8 60 55.0
Psat5g090120 Pisum sativum HOM05D000288 ORTHO05D000173 2.1e-08 62.8 83 47.0
ClCG09G009530 Citrullus lanatus HOM05D000288 ORTHO05D000173 2.8e-08 62.4 78 50.0
Nitab4.5_0000838g0020 Nicotiana tabacum HOM05D000288 ORTHO05D000173 2.8e-08 62.4 82 41.5
Sed0026278 Sechium edule HOM05D000288 ORTHO05D000173 2.8e-08 62.4 61 50.8
Medtr8g027840 Medicago truncatula HOM05D000288 ORTHO05D000173 3.7e-08 62.0 89 43.8
Peaxi162Scf00416g00055 Petunia axillaris HOM05D000288 ORTHO05D000173 3.7e-08 62.0 66 50.0
Peaxi162Scf00416g00064 Petunia axillaris HOM05D000288 ORTHO05D000173 3.7e-08 62.0 66 50.0
Peaxi162Scf01672g00001 Petunia axillaris HOM05D000288 ORTHO05D000173 3.7e-08 62.0 66 50.0
TAR374G0181 Trochodendron aralioides HOM05D001772 ORTHO05D005958 3.7e-08 62.0 86 47.7
Pp3c1_20640 Physcomitrium patens HOM05D000288 ORTHO05D000173 4.8e-08 61.6 87 44.8
PSO017G2796 Papaver somniferum HOM05D000288 ORTHO05D000173 6.2e-08 61.2 90 41.1
TPR.G1236 Trifolium pratense HOM05D000288 ORTHO05D000173 6.2e-08 61.2 94 46.8
CBR_g20423 Chara braunii HOM05D000288 ORTHO05D000173 8.1e-08 60.8 103 39.8
Rhsim01G0171200 Rhododendron simsii HOM05D000288 ORTHO05D000173 8.1e-08 60.8 79 44.3
Thhalv10008889m.g Eutrema salsugineum HOM05D000288 ORTHO05D000173 1.4e-07 60.1 80 50.0
PSO135G0949 Papaver somniferum HOM05D000288 ORTHO05D000173 1.4e-07 60.1 56 55.4
Aa31LG1G10960 Aethionema arabicum HOM05D000288 ORTHO05D000173 2.4e-07 59.3 87 44.8
Psat4g160400 Pisum sativum HOM05D000288 ORTHO05D000173 2.4e-07 59.3 102 39.2
ECA238G3261 Erigeron canadensis HOM05D000288 ORTHO05D000173 3.1e-07 58.9 105 42.9
Hund22303 Selenicereus undatus HOM05D000288 ORTHO05D000173 3.1e-07 58.9 90 41.1
HPP92_027851 Vanilla planifolia HOM05D000288 ORTHO05D000173 3.1e-07 58.9 77 48.1
Cre16.g661450 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 4.0e-07 58.5 128 42.2
MD03G1162100 Malus domestica HOM05D000288 ORTHO05D000173 4.0e-07 58.5 58 53.4
Gohir.D07G143700 Gossypium hirsutum HOM05D000288 ORTHO05D000173 5.3e-07 58.2 111 37.8
MD09G1242000 Malus domestica HOM05D000288 ORTHO05D000173 5.3e-07 58.2 96 44.8
PRCOL_00004986 Prasinoderma coloniale HOM05D000288 ORTHO05D000173 5.3e-07 58.2 98 45.9
PGR042G1839 Punica granatum HOM05D000288 ORTHO05D000173 5.3e-07 58.2 98 37.8
BolC8t52879H Brassica oleracea HOM05D000288 ORTHO05D000173 9.0e-07 57.4 69 50.7
BraA09t42245Z Brassica rapa HOM05D000288 ORTHO05D000173 9.0e-07 57.4 69 50.7
Prupe.2G185400 Prunus persica HOM05D000288 ORTHO05D000173 9.0e-07 57.4 56 53.6
AL1G11082 Arabidopsis lyrata HOM05D000288 ORTHO05D000173 1.2e-06 57.0 57 54.4
AL1G59290 Arabidopsis lyrata HOM05D000288 ORTHO05D000173 1.2e-06 57.0 57 54.4
Carub.0001s0086 Capsella rubella HOM05D000288 ORTHO05D000173 1.2e-06 57.0 83 49.4
Gohir.A07G138600 Gossypium hirsutum HOM05D000288 ORTHO05D000173 1.2e-06 57.0 110 37.3
PSO135G0036 Papaver somniferum HOM05D000288 ORTHO05D000173 1.2e-06 57.0 95 41.1
Lsat_1_v5_gn_2_63440 Lactuca sativa HOM05D000288 ORTHO05D000173 1.5e-06 56.6 60 48.3
AT1G01370 Arabidopsis thaliana HOM05D000288 ORTHO05D000173 2.0e-06 56.2 61 50.8
AT1G75600 Arabidopsis thaliana HOM05D000288 ORTHO05D000173 2.0e-06 56.2 96 42.7
A09p69080 Brassica napus HOM05D000288 ORTHO05D000173 2.0e-06 56.2 90 45.6
C08p53650 Brassica napus HOM05D000288 ORTHO05D000173 2.0e-06 56.2 90 45.6
COL.COLO4_06309 Corchorus olitorius HOM05D000288 ORTHO05D000173 2.0e-06 56.2 89 43.8
THA.LOC104825875 Tarenaya hassleriana HOM05D000288 ORTHO05D000173 2.0e-06 56.2 61 50.8
Cre06.g264650 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 3.4e-06 55.5 95 43.2
Cre06.g265000 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 3.4e-06 55.5 95 43.2
Cre06.g265250 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 3.4e-06 55.5 95 43.2
Cre06.g265500 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 3.4e-06 55.5 95 43.2
Cre06.g266650 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 3.4e-06 55.5 95 43.2
Cre06.g267950 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 3.4e-06 55.5 95 43.2
Cre06.g268350 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 3.4e-06 55.5 95 43.2
Cre06.g271250 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 3.4e-06 55.5 95 43.2
Cre06.g274000 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 3.4e-06 55.5 95 43.2
Cre06.g274101 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 3.4e-06 55.5 95 43.2
Cre06.g274350 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 3.4e-06 55.5 95 43.2
Cre06.g274850 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 3.4e-06 55.5 95 43.2
Cre06.g275750 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 3.4e-06 55.5 95 43.2
Cre06.g276600 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 3.4e-06 55.5 95 43.2
Cre06.g276850 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 3.4e-06 55.5 95 43.2
Cre12.g504650 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 3.4e-06 55.5 95 43.2
Cre12.g504800 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 3.4e-06 55.5 95 43.2
Cre12.g505500 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 3.4e-06 55.5 95 43.2
Cre12.g506300 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 3.4e-06 55.5 95 43.2
Cre12.g506500 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 3.4e-06 55.5 95 43.2
Cre13.g569950 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 3.4e-06 55.5 95 43.2
Cre16.g648500 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 3.4e-06 55.5 95 43.2
Cre16.g649900 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 3.4e-06 55.5 95 43.2
Cre16.g650300 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 3.4e-06 55.5 95 43.2
Cre17.g708150 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 3.4e-06 55.5 95 43.2
Cre17.g708700 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 3.4e-06 55.5 95 43.2
Cre17.g709050 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 3.4e-06 55.5 95 43.2
Cre17.g710550 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 3.4e-06 55.5 95 43.2
Cre17.g711850 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 3.4e-06 55.5 95 43.2
Cre17.g713550 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 3.4e-06 55.5 95 43.2
Cre17.g713950 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 3.4e-06 55.5 95 43.2
Cre17.g714650 Chlamydomonas reinhardtii HOM05D000288 ORTHO05D000173 3.4e-06 55.5 95 43.2
Carub.0001s1941 Capsella rubella HOM05D000288 ORTHO05D000173 4.5e-06 55.1 97 44.3
Thecc.01G345100 Theobroma cacao HOM05D000288 ORTHO05D000173 4.5e-06 55.1 119 37.8
HanXRQChr15g0483711 Helianthus annuus HOM05D000288 ORTHO05D000173 5.8e-06 54.7 100 38.0
Sp1g00920 Schrenkiella parvula HOM05D000288 ORTHO05D000173 5.8e-06 54.7 71 47.9
AL2G35580 Arabidopsis lyrata HOM05D000288 ORTHO05D000173 7.6e-06 54.3 96 41.7
AUR62019149 Chenopodium quinoa HOM05D000288 ORTHO05D000173 7.6e-06 54.3 109 41.3
FvH4_3g41380 Fragaria vesca HOM05D000288 ORTHO05D000173 7.6e-06 54.3 96 41.7
Peaxi162Scf00263g00004 Petunia axillaris HOM05D000288 ORTHO05D000173 7.6e-06 54.3 96 41.7
SMO266G0066 Selaginella moellendorffii HOM05D000288 ORTHO05D000173 7.6e-06 54.3 96 42.7
SGA_v2.0_scaffold162G37936 Striga asiatica HOM05D000288 ORTHO05D000173 7.6e-06 54.3 89 42.7
Thecc.08G102900 Theobroma cacao HOM05D000288 ORTHO05D000173 7.6e-06 54.3 96 42.7
EL10Ac1g00449 Beta vulgaris HOM05D000288 ORTHO05D000173 1.0e-05 53.9 109 41.3
Cfa024597 Carpinus fangiana HOM05D000288 ORTHO05D000173 1.0e-05 53.9 87 43.7
FvH4_3g41371 Fragaria vesca HOM05D000288 ORTHO05D000173 1.0e-05 53.9 96 40.6
FAN11G0476 Fragaria x ananassa HOM05D000288 ORTHO05D000173 1.0e-05 53.9 96 40.6
FAN21G3235 Fragaria x ananassa HOM05D000288 ORTHO05D000173 1.0e-05 53.9 96 40.6
Hma1.2p1_0728F.1_g209363 Hydrangea macrophylla HOM05D000288 ORTHO05D000173 1.0e-05 53.9 89 43.8
Hma1.2p1_0728F.1_g209370 Hydrangea macrophylla HOM05D000288 ORTHO05D000173 1.0e-05 53.9 89 43.8
PSO384G1684 Papaver somniferum HOM05D000288 ORTHO05D000173 1.0e-05 53.9 100 38.0


User provided reference genes

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