Gene: AT1G01370

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G01370
  • Transcript Identifier AT1G01370.3
  • Gene Type Coding gene
  • Location Chr1 : 143773-145400 : positive

Gene Family Information

  • ID HOM05D000288
  • #Genes/#Species 1531/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G01370.3
  • symbol HTR12
  • uniprot Q8RVQ9

Descriptions

  • Description Histone superfamily protein
  • Computational description HTR12; FUNCTIONS IN: DNA binding; INVOLVED IN: double fertilization forming a zygote and endosperm; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: male-gamete-specific histone H3 (TAIR:AT1G19890.1); Has 14361 Blast hits to 14354 proteins in 7190 species: Archae - 0; Bacteria - 0; Metazoa - 10494; Fungi - 2020; Plants - 1256; Viruses - 0; Other Eukaryotes - 591 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034508
IMP
Gene Ontologycentromere complex assembly1
GO:0051321
IMP
Gene Ontologymeiotic cell cycle2
GO:0051307
IMP
Gene Ontologymeiotic chromosome separation2
GO:0051301
IMP
Gene Ontologycell division2
GO:0009567
IEP
Gene Ontologydouble fertilization forming a zygote and endosperm3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046982
IEA
Gene Ontologyprotein heterodimerization activity
GO:0046982
IEA
InterProprotein heterodimerization activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0005515
IPI
Gene Ontologyprotein binding4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000786
IEA
GOA Databasenucleosome
GO:0000786
IEA
InterPronucleosome
GO:0000775
IEA
GOA Databasechromosome, centromeric region
GO:0000775
IDA
Gene Ontologychromosome, centromeric region5
GO:0000776
IEA
GOA Databasekinetochore
GO:0005694
IEA
GOA Databasechromosome
GO:0005634
IDA
ISM, IBA
Gene Ontologynucleus3 6
GO:0000785
IDA
Gene Ontologychromatin7

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007125 Histone H2A/H2B/H3
IPR000164 Histone H3/CENP-A
IPR009072 Histone-fold
Mapman id Description
13.3.2.2.3 Cell cycle organisation.mitosis and meiosis.chromosome segregation.centromere assembly and maintenance.histone H3 variant (CENH3)