Gene: Pp3c1_20640
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c1_20640
- Transcript Identifier Pp3c1_20640V3.2
- Gene Type Coding gene
- Location Chr01 : 15676448-15678532 : positive
Gene Family Information
- ID HOM05D000288
- #Genes/#Species 1531/100
- Phylogenetic origin
- ID ORTHO05D000173
- #Genes/#Species 1498/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- name Pp3c1_20640V3.2
- pacid 32967508
- alias Pp1s568_8V6
- alias Phpat.001G076700
- alias Phypa_228359
- uniprot A9U534
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051301 | ISO | PLAZA Integrative Orthology | cell division | AT1G01370 |
| GO:0034508 | ISO | PLAZA Integrative Orthology | centromere complex assembly | AT1G01370 |
| GO:0051321 | ISO | PLAZA Integrative Orthology | meiotic cell cycle | AT1G01370 |
| GO:0009567 | ISO | PLAZA Integrative Orthology | double fertilization forming a zygote and endosperm | AT1G01370 |
| GO:0051307 | ISO | PLAZA Integrative Orthology | meiotic chromosome separation | AT1G01370 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0046982 | IEA | GOA Database | protein heterodimerization activity | |
| GO:0046982 | IEA | InterPro | protein heterodimerization activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G01370 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000786 | IEA | GOA Database | nucleosome | |
| GO:0000786 | IEA | InterPro | nucleosome | |
| GO:0005634 | IBA | GOA Database | nucleus | |
| GO:0000775 | ISO | PLAZA Integrative Orthology | chromosome, centromeric region | AT1G01370 |
| GO:0000785 | ISO | PLAZA Integrative Orthology | chromatin | AT1G01370 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 13.3.2.2.3 | Cell cycle organisation.mitosis and meiosis.chromosome segregation.centromere assembly and maintenance.histone H3 variant (CENH3) |