Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0147G008 Amborella trichopoda HOM05D004284 ORTHO05D006610 2.1e-48 195.3 91 100.0
Dinv23446 Davidia involucrata HOM05D004284 ORTHO05D006610 4.0e-44 181.0 89 92.1
Actinidia00120 Actinidia chinensis HOM05D004284 ORTHO05D006610 1.2e-43 179.5 89 91.0
Actinidia20651 Actinidia chinensis HOM05D004284 ORTHO05D006610 1.2e-43 179.5 89 91.0
Oeu055646.2 Olea europaea HOM05D004284 ORTHO05D006610 4.5e-43 177.6 89 91.0
TAR376G0598 Trochodendron aralioides HOM05D004284 ORTHO05D006610 5.8e-43 177.2 89 92.1
GSVIVG01024158001 Vitis vinifera HOM05D004284 ORTHO05D006610 7.6e-43 176.8 89 88.8
Lj5A188T39 Lonicera japonica HOM05D004284 ORTHO05D006610 9.9e-43 176.4 89 88.8
MBI05_g26520_MAGBIO Magnolia biondii HOM05D004284 ORTHO05D006610 9.9e-43 176.4 89 87.6
Nn6g32279 Nelumbo nucifera HOM05D004284 ORTHO05D006610 2.2e-42 175.3 89 91.0
Sabra09G0096500 Salix brachista HOM05D004284 ORTHO05D006610 2.2e-42 175.3 89 88.8
SGA_v2.0_scaffold58G20431 Striga asiatica HOM05D004284 ORTHO05D006610 2.2e-42 175.3 89 89.9
COL.COLO4_10617 Corchorus olitorius HOM05D004284 ORTHO05D006610 3.8e-42 174.5 89 89.9
Eucgr.G01740 Eucalyptus grandis HOM05D004284 ORTHO05D006610 4.9e-42 174.1 89 86.5
Thecc.02G073500 Theobroma cacao HOM05D004284 ORTHO05D006610 4.9e-42 174.1 89 88.8
PGR042G3704 Punica granatum HOM05D004284 ORTHO05D006610 6.4e-42 173.7 89 87.6
THA.LOC104824786 Tarenaya hassleriana HOM05D004284 ORTHO05D006610 6.4e-42 173.7 89 89.9
Cpa.g.sc150.5 Carica papaya HOM05D004284 ORTHO05D006610 8.4e-42 173.3 89 88.8
Nitab4.5_0002096g0020 Nicotiana tabacum HOM05D004284 ORTHO05D006610 8.4e-42 173.3 89 87.6
Zm00001eb419910 Zea mays HOM05D004284 ORTHO05D006610 8.4e-42 173.3 89 88.8
CSS0028050 Camellia sinensis var. sinensis HOM05D004284 ORTHO05D006610 1.1e-41 172.9 89 89.9
Glyma.04G007400 Glycine max HOM05D004284 ORTHO05D006610 1.1e-41 172.9 89 88.8
Nitab4.5_0010885g0030 Nicotiana tabacum HOM05D004284 ORTHO05D006610 1.1e-41 172.9 89 87.6
CAN.G1329.2 Capsicum annuum HOM05D004284 ORTHO05D006610 1.4e-41 172.6 89 85.4
Gohir.D13G090800 Gossypium hirsutum HOM05D004284 ORTHO05D006610 1.4e-41 172.6 89 88.8
Gorai.001G243900 Gossypium raimondii HOM05D004284 ORTHO05D006610 1.4e-41 172.6 89 88.8
Phvul.009G002300 Phaseolus vulgaris HOM05D004284 ORTHO05D006610 1.4e-41 172.6 89 87.6
vmacro02047 Vaccinium macrocarpon HOM05D004284 ORTHO05D006610 1.4e-41 172.6 89 87.6
Duzib132G0815 Durio zibethinus HOM05D004284 ORTHO05D006610 1.9e-41 172.2 89 88.8
Migut.B00123 Erythranthe guttata HOM05D004284 ORTHO05D006610 1.9e-41 172.2 89 84.3
SEGI_09605 Sequoiadendron giganteum HOM05D004284 ORTHO05D006610 1.9e-41 172.2 89 86.5
Atru.chr5.3162 Acer truncatum HOM05D004284 ORTHO05D006610 2.4e-41 171.8 89 85.4
Atru.chr5.3174 Acer truncatum HOM05D004284 ORTHO05D006610 2.4e-41 171.8 89 85.4
CSS0013523 Camellia sinensis var. sinensis HOM05D004284 ORTHO05D006610 2.4e-41 171.8 89 87.6
CSS0041983 Camellia sinensis var. sinensis HOM05D004284 ORTHO05D006610 2.4e-41 171.8 89 87.6
CDE02G2842 Ceratophyllum demersum HOM05D004284 ORTHO05D006610 2.4e-41 171.8 89 86.5
ClCG02G004440 Citrullus lanatus HOM05D004284 ORTHO05D006610 3.2e-41 171.4 89 86.5
Ciclev10027934m.g Citrus clementina HOM05D004284 ORTHO05D006610 3.2e-41 171.4 89 88.8
Cc02_g16820 Coffea canephora HOM05D004284 ORTHO05D006610 3.2e-41 171.4 89 86.5
Duzib052G1007 Durio zibethinus HOM05D004284 ORTHO05D006610 3.2e-41 171.4 89 87.6
Gohir.A13G086645 Gossypium hirsutum HOM05D004284 ORTHO05D006610 3.2e-41 171.4 89 87.6
Manes.11G081200 Manihot esculenta HOM05D004284 ORTHO05D006610 3.2e-41 171.4 89 87.6
Potri.009G125500 Populus trichocarpa HOM05D004284 ORTHO05D006610 3.2e-41 171.4 89 86.5
Rhsim11G0184600 Rhododendron simsii HOM05D004284 ORTHO05D006610 3.2e-41 171.4 89 86.5
Sed0001411 Sechium edule HOM05D004284 ORTHO05D006610 3.2e-41 171.4 89 87.6
Os04g0117600 Oryza sativa ssp. japonica HOM05D004284 ORTHO05D006610 5.4e-41 170.6 89 88.8
TWI75G0546 Tripterygium wilfordii HOM05D004284 ORTHO05D006610 5.4e-41 170.6 89 86.5
AL7G10770 Arabidopsis lyrata HOM05D004284 ORTHO05D006610 7.1e-41 170.2 89 84.3
AT4G38890 Arabidopsis thaliana HOM05D004284 ORTHO05D006610 7.1e-41 170.2 89 84.3
MSTRG.20021 Avicennia marina HOM05D004284 ORTHO05D006610 7.1e-41 170.2 89 87.6
MELO3C013406.2 Cucumis melo HOM05D004284 ORTHO05D006610 7.1e-41 170.2 89 86.5
CsaV3_7G000530 Cucumis sativus L. HOM05D004284 ORTHO05D006610 7.1e-41 170.2 89 86.5
Lalb_Chr11g0061291 Lupinus albus HOM05D004284 ORTHO05D006610 7.1e-41 170.2 89 86.5
Aa31LG6G16360 Aethionema arabicum HOM05D004284 ORTHO05D006610 1.2e-40 169.5 89 83.1
BcaNung04214 Brassica carinata HOM05D004284 ORTHO05D006610 1.6e-40 169.1 89 83.1
A01p00130 Brassica napus HOM05D004284 ORTHO05D006610 1.6e-40 169.1 89 83.1
C01p00170 Brassica napus HOM05D004284 ORTHO05D006610 1.6e-40 169.1 89 83.1
BolC1t00022H Brassica oleracea HOM05D004284 ORTHO05D006610 1.6e-40 169.1 89 83.1
BraA01t00017Z Brassica rapa HOM05D004284 ORTHO05D006610 1.6e-40 169.1 89 83.1
Carub.0007s0074 Capsella rubella HOM05D004284 ORTHO05D006610 1.6e-40 169.1 89 83.1
CARHR247870 Cardamine hirsuta HOM05D004284 ORTHO05D006610 1.6e-40 169.1 89 83.1
Thhalv10024574m.g Eutrema salsugineum HOM05D004284 ORTHO05D006610 1.6e-40 169.1 89 83.1
QL11p046610 Quercus lobata HOM05D004284 ORTHO05D006610 1.6e-40 169.1 88 86.4
RcHm_v2.0_Chr6g0268371 Rosa chinensis HOM05D004284 ORTHO05D006610 1.6e-40 169.1 89 85.4
Sp7g36950 Schrenkiella parvula HOM05D004284 ORTHO05D006610 1.6e-40 169.1 89 83.1
Lj1g0012810 Lotus japonicus HOM05D004284 ORTHO05D006610 2.1e-40 168.7 89 86.5
arahy.Tifrunner.gnm1.ann1.6AD899 Arachis hypogaea HOM05D004284 ORTHO05D006610 2.7e-40 168.3 89 85.4
arahy.Tifrunner.gnm1.ann1.835YPG Arachis hypogaea HOM05D004284 ORTHO05D006610 2.7e-40 168.3 89 85.4
Ca_15330_v3 Cicer arietinum L. HOM05D004284 ORTHO05D006610 2.7e-40 168.3 89 84.3
TPR.G32210 Trifolium pratense HOM05D004284 ORTHO05D006610 2.7e-40 168.3 89 84.3
DCAR_022791 Daucus carota HOM05D004284 ORTHO05D006610 3.5e-40 167.9 89 85.4
MD10G1062000 Malus domestica HOM05D004284 ORTHO05D006610 3.5e-40 167.9 89 84.3
Medtr3g117580 Medicago truncatula HOM05D004284 ORTHO05D006610 3.5e-40 167.9 89 85.4
FvH4_2g10690 Fragaria vesca HOM05D004284 ORTHO05D006610 4.6e-40 167.5 89 84.3
FAN15G2871 Fragaria x ananassa HOM05D004284 ORTHO05D006610 4.6e-40 167.5 89 84.3
Aqoxy3G00712 Aquilegia oxysepala HOM05D004284 ORTHO05D006610 6.0e-40 167.2 89 84.3
CiPaw.05G074300 Carya illinoinensis HOM05D004284 ORTHO05D006610 6.0e-40 167.2 89 85.4
FAN20G0619 Fragaria x ananassa HOM05D004284 ORTHO05D006610 6.0e-40 167.2 89 83.1
EL10Ac9g21612 Beta vulgaris HOM05D004284 ORTHO05D006610 7.9e-40 166.8 89 83.1
Hund00174 Selenicereus undatus HOM05D004284 ORTHO05D006610 7.9e-40 166.8 89 84.3
Hund00182 Selenicereus undatus HOM05D004284 ORTHO05D006610 7.9e-40 166.8 89 84.3
Haze_02227 Corylus avellana HOM05D004284 ORTHO05D006610 1.3e-39 166.0 89 87.6
Lsat_1_v5_gn_8_126921 Lactuca sativa HOM05D004284 ORTHO05D006610 1.3e-39 166.0 89 80.9
Peaxi162Scf00362g11100 Petunia axillaris HOM05D004284 ORTHO05D006610 1.3e-39 166.0 89 84.3
Prupe.8G082800 Prunus persica HOM05D004284 ORTHO05D006610 1.3e-39 166.0 89 83.1
TWI79G0275 Tripterygium wilfordii HOM05D004284 ORTHO05D006610 1.3e-39 166.0 89 83.1
TWI79G1346 Tripterygium wilfordii HOM05D004284 ORTHO05D006610 1.3e-39 166.0 89 83.1
HanXRQChr17g0557281 Helianthus annuus HOM05D004284 ORTHO05D006610 1.8e-39 165.6 89 83.1
Pp3c4_14410 Physcomitrium patens HOM05D004284 ORTHO05D006610 1.8e-39 165.6 89 79.8
PSO541G2222 Papaver somniferum HOM05D004284 ORTHO05D006610 2.3e-39 165.2 89 84.3
PSO675G4636 Papaver somniferum HOM05D004284 ORTHO05D006610 2.3e-39 165.2 89 84.3
Psat5g003800 Pisum sativum HOM05D004284 ORTHO05D006610 2.3e-39 165.2 89 82.0
Cfa005121 Carpinus fangiana HOM05D004284 ORTHO05D006610 3.9e-39 164.5 89 86.5
Solyc01g110490.4 Solanum lycopersicum HOM05D004284 ORTHO05D006610 5.1e-39 164.1 89 80.9
Sopen01g052620 Solanum pennellii HOM05D004284 ORTHO05D006610 5.1e-39 164.1 89 80.9
PGSC0003DMG400001658 Solanum tuberosum HOM05D004284 ORTHO05D006610 6.7e-39 163.7 89 79.8
CANSAT11G1394 Cannabis sativa HOM05D004284 ORTHO05D006610 8.7e-39 163.3 89 84.3
SMO119G0149 Selaginella moellendorffii HOM05D004284 ORTHO05D006610 2.5e-38 161.8 89 80.9
RcHm_v2.0_Chr6g0271661 Rosa chinensis HOM05D004284 ORTHO05D006610 3.3e-38 161.4 94 79.8
AagrBONN_evm.TU.Sc2ySwM_228.2393 Anthoceros agrestis HOM05D004284 ORTHO05D006610 4.3e-38 161.0 89 79.8
ECA233G5694 Erigeron canadensis HOM05D004284 ORTHO05D006610 7.4e-38 160.2 89 79.8
AUR62010367 Chenopodium quinoa HOM05D004284 ORTHO05D006610 3.7e-37 157.9 89 78.7
AUR62016852 Chenopodium quinoa HOM05D004284 ORTHO05D006610 4.8e-37 157.5 89 78.7
Mapoly0159s0020 Marchantia polymorpha HOM05D004284 ORTHO05D006610 3.1e-36 154.8 89 76.4
CBR_g29609 Chara braunii HOM05D004284 ORTHO05D006610 4.9e-34 147.5 90 74.4
Actinidia15945 Actinidia chinensis HOM05D004284 ORTHO05D006610 1.2e-32 142.9 73 87.7
Ah.01g018640 Amaranthus hybridus HOM05D004284 ORTHO05D006610 3.0e-31 138.3 72 84.7
vmacro22697 Vaccinium macrocarpon HOM05D004284 ORTHO05D006610 3.7e-29 131.3 67 88.1
HPP92_014972 Vanilla planifolia HOM05D004284 ORTHO05D006610 2.4e-28 128.6 65 87.7
Cre04.g229948 Chlamydomonas reinhardtii HOM05D004284 ORTHO05D006610 7.6e-27 123.6 88 60.2
Actinidia27849 Actinidia chinensis HOM05D004284 ORTHO05D006610 1.1e-25 119.8 59 86.4
Haze_26610 Corylus avellana HOM05D004284 ORTHO05D006610 9.3e-25 116.7 86 59.3
Cfa023181 Carpinus fangiana HOM05D004284 ORTHO05D006610 2.1e-24 115.5 88 56.8
Gorai.004G070900 Gossypium raimondii HOM05D004284 ORTHO05D006610 2.1e-24 115.5 65 78.5
MCO09G016 Micromonas commoda HOM05D004284 ORTHO05D006610 2.7e-24 115.2 84 57.1
PRCOL_00002812 Prasinoderma coloniale HOM05D004284 ORTHO05D006610 1.8e-23 112.5 82 62.2
Sc18g0005440 Simmondsia chinensis HOM05D004284 ORTHO05D006610 5.1e-23 110.9 56 85.7
VMungo1309G1744 Vigna mungo HOM05D004284 ORTHO05D006610 5.1e-23 110.9 56 87.5
MCO16G514 Micromonas commoda HOM05D004284 ORTHO05D006610 1.9e-22 109.0 83 56.6
MD05G1054400 Malus domestica HOM05D004284 ORTHO05D006610 3.9e-07 58.2 51 52.9
RcHm_v2.0_Chr6g0268461 Rosa chinensis HOM05D004284 ORTHO05D006610 7.4e-06 53.9 29 79.3


User provided reference genes

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