Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0071G005 Amborella trichopoda HOM05D005383 ORTHO05D006722 5.0e-69 264.2 127 100.0
ATR0071G030 Amborella trichopoda HOM05D005383 ORTHO05D006722 2.3e-45 185.7 100 89.0
TAR628G0519 Trochodendron aralioides HOM05D005383 ORTHO05D006722 3.7e-27 125.2 101 62.4
TAR381G0956 Trochodendron aralioides HOM05D005383 ORTHO05D006722 1.1e-26 123.6 101 64.4
Nn5g27588 Nelumbo nucifera HOM05D005383 ORTHO05D006722 1.5e-25 119.8 102 64.7
Aqoxy6G00141 Aquilegia oxysepala HOM05D005383 ORTHO05D006722 1.3e-24 116.7 88 62.5
Solyc03g083310.4 Solanum lycopersicum HOM05D005383 ORTHO05D006722 3.8e-24 115.2 95 62.1
PSO063G2254 Papaver somniferum HOM05D005383 ORTHO05D006722 6.5e-24 114.4 105 60.0
Nitab4.5_0000548g0200 Nicotiana tabacum HOM05D005383 ORTHO05D006722 1.1e-23 113.6 95 62.1
Peaxi162Scf03254g00012 Petunia axillaris HOM05D005383 ORTHO05D006722 2.5e-23 112.5 104 57.7
CANSAT54G1323 Cannabis sativa HOM05D005383 ORTHO05D006722 5.5e-23 111.3 93 61.3
FvH4_5g28700 Fragaria vesca HOM05D005383 ORTHO05D006722 5.5e-23 111.3 103 59.2
FAN08G2879 Fragaria x ananassa HOM05D005383 ORTHO05D006722 5.5e-23 111.3 103 59.2
FAN13G0305 Fragaria x ananassa HOM05D005383 ORTHO05D006722 5.5e-23 111.3 103 59.2
Peaxi162Scf00003g04037 Petunia axillaris HOM05D005383 ORTHO05D006722 5.5e-23 111.3 102 57.8
CDE08G1140 Ceratophyllum demersum HOM05D005383 ORTHO05D006722 1.2e-22 110.2 95 60.0
Nitab4.5_0009812g0010 Nicotiana tabacum HOM05D005383 ORTHO05D006722 1.2e-22 110.2 95 60.0
Hund12945 Selenicereus undatus HOM05D005383 ORTHO05D006722 4.6e-22 108.2 101 60.4
CAN.G968.1 Capsicum annuum HOM05D005383 ORTHO05D006722 1.0e-21 107.1 95 57.9
CDE02G2650 Ceratophyllum demersum HOM05D005383 ORTHO05D006722 1.0e-21 107.1 95 57.9
AUR62041111 Chenopodium quinoa HOM05D005383 ORTHO05D006722 1.0e-21 107.1 102 58.8
AT4G06634 Arabidopsis thaliana HOM05D005383 ORTHO05D006722 1.3e-21 106.7 101 58.4
A10p07980 Brassica napus HOM05D005383 ORTHO05D006722 1.3e-21 106.7 92 59.8
BraSC35t46002Z Brassica rapa HOM05D005383 ORTHO05D006722 1.3e-21 106.7 92 59.8
Lj4g0022432 Lotus japonicus HOM05D005383 ORTHO05D006722 1.3e-21 106.7 93 60.2
Prupe.1G576100 Prunus persica HOM05D005383 ORTHO05D006722 1.3e-21 106.7 93 63.4
GSVIVG01023286001 Vitis vinifera HOM05D005383 ORTHO05D006722 1.3e-21 106.7 95 61.1
Dinv01847 Davidia involucrata HOM05D005383 ORTHO05D006722 1.8e-21 106.3 101 55.4
QL02p099934 Quercus lobata HOM05D005383 ORTHO05D006722 2.3e-21 105.9 102 57.8
RcHm_v2.0_Chr7g0220861 Rosa chinensis HOM05D005383 ORTHO05D006722 2.3e-21 105.9 92 62.0
Ciclev10001534m.g Citrus clementina HOM05D005383 ORTHO05D006722 3.0e-21 105.5 89 64.0
Ciclev10003783m.g Citrus clementina HOM05D005383 ORTHO05D006722 3.0e-21 105.5 89 64.0
PSO017G2626 Papaver somniferum HOM05D005383 ORTHO05D006722 3.0e-21 105.5 105 56.2
Cpa.g.sc161.1 Carica papaya HOM05D005383 ORTHO05D006722 3.9e-21 105.1 84 63.1
TWI23G0375 Tripterygium wilfordii HOM05D005383 ORTHO05D006722 3.9e-21 105.1 96 59.4
Ciclev10003892m.g Citrus clementina HOM05D005383 ORTHO05D006722 5.1e-21 104.8 89 64.0
BcaB08g35467 Brassica carinata HOM05D005383 ORTHO05D006722 6.7e-21 104.4 92 59.8
BcaC04g20728 Brassica carinata HOM05D005383 ORTHO05D006722 6.7e-21 104.4 92 58.7
C09p39820 Brassica napus HOM05D005383 ORTHO05D006722 6.7e-21 104.4 92 58.7
BolC9t56882H Brassica oleracea HOM05D005383 ORTHO05D006722 6.7e-21 104.4 92 58.7
EL10Ac2g02705 Beta vulgaris HOM05D005383 ORTHO05D006722 8.7e-21 104.0 95 57.9
Haze_01820 Corylus avellana HOM05D005383 ORTHO05D006722 1.5e-20 103.2 95 56.8
Hma1.2p1_1108F.1_g257860 Hydrangea macrophylla HOM05D005383 ORTHO05D006722 1.9e-20 102.8 96 56.2
Sabra01G0167800 Salix brachista HOM05D005383 ORTHO05D006722 1.9e-20 102.8 96 57.3
HPP92_013744 Vanilla planifolia HOM05D006763 ORTHO05D008659 3.3e-20 102.1 100 51.0
arahy.Tifrunner.gnm1.ann1.I6AGPX Arachis hypogaea HOM05D005383 ORTHO05D006722 4.3e-20 101.7 95 56.8
CiPaw.06G143700 Carya illinoinensis HOM05D005383 ORTHO05D006722 4.3e-20 101.7 96 55.2
Gohir.D01G173100 Gossypium hirsutum HOM05D005383 ORTHO05D006722 4.3e-20 101.7 95 58.9
PGSC0003DMG400009082 Solanum tuberosum HOM05D005383 ORTHO05D006722 4.3e-20 101.7 95 56.8
Lj9A301T38 Lonicera japonica HOM05D005383 ORTHO05D006722 5.7e-20 101.3 95 55.8
CSS0013900 Camellia sinensis var. sinensis HOM05D005383 ORTHO05D006722 7.4e-20 100.9 96 57.3
CSS0016011 Camellia sinensis var. sinensis HOM05D005383 ORTHO05D006722 7.4e-20 100.9 96 57.3
Duzib248G0552 Durio zibethinus HOM05D005383 ORTHO05D006722 7.4e-20 100.9 102 56.9
Gorai.002G214700 Gossypium raimondii HOM05D005383 ORTHO05D006722 1.3e-19 100.1 95 57.9
COL.COLO4_17761 Corchorus olitorius HOM05D005383 ORTHO05D006722 1.6e-19 99.8 94 57.4
Sc07g0004970 Simmondsia chinensis HOM05D005383 ORTHO05D006722 1.6e-19 99.8 101 52.5
arahy.Tifrunner.gnm1.ann1.E4SRBI Arachis hypogaea HOM05D005383 ORTHO05D006722 2.2e-19 99.4 93 57.0
CiPaw.05G051100 Carya illinoinensis HOM05D005383 ORTHO05D006722 2.2e-19 99.4 95 55.8
Sp6g13330 Schrenkiella parvula HOM05D005383 ORTHO05D006722 2.2e-19 99.4 92 56.5
Atru.chr6.733 Acer truncatum HOM05D005383 ORTHO05D006722 2.8e-19 99.0 95 56.8
AL6G41240 Arabidopsis lyrata HOM05D005383 ORTHO05D006722 2.8e-19 99.0 105 54.3
vmacro01730 Vaccinium macrocarpon HOM05D005383 ORTHO05D006722 2.8e-19 99.0 102 53.9
arahy.Tifrunner.gnm1.ann1.UJ0XJV Arachis hypogaea HOM05D005383 ORTHO05D006722 3.7e-19 98.6 101 55.4
Cc02_g22940 Coffea canephora HOM05D005383 ORTHO05D006722 3.7e-19 98.6 101 54.5
Gohir.A01G182000 Gossypium hirsutum HOM05D005383 ORTHO05D006722 3.7e-19 98.6 95 57.9
Thecc.02G025800 Theobroma cacao HOM05D005383 ORTHO05D006722 3.7e-19 98.6 102 56.9
Carub.0006s2631 Capsella rubella HOM05D005383 ORTHO05D006722 4.8e-19 98.2 95 56.8
CAN.G982.21 Capsicum annuum HOM05D005383 ORTHO05D006722 6.3e-19 97.8 112 49.1
Potri.004G221700 Populus trichocarpa HOM05D005383 ORTHO05D006722 6.3e-19 97.8 93 59.1
Rhsim11G0125900 Rhododendron simsii HOM05D005383 ORTHO05D006722 6.3e-19 97.8 93 59.1
Thhalv10028723m.g Eutrema salsugineum HOM05D005383 ORTHO05D006722 8.2e-19 97.4 88 59.1
TPR.G2110 Trifolium pratense HOM05D005383 ORTHO05D006722 1.1e-18 97.1 94 57.4
Potri.003G010400 Populus trichocarpa HOM05D005383 ORTHO05D006722 1.4e-18 96.7 96 55.2
Sopen03g023060 Solanum pennellii HOM05D005383 ORTHO05D006722 1.4e-18 96.7 83 59.0
Ca_00052_v3 Cicer arietinum L. HOM05D005383 ORTHO05D006722 1.8e-18 96.3 94 57.4
Glyma.05G167900 Glycine max HOM05D005383 ORTHO05D006722 1.8e-18 96.3 103 54.4
Manes.10G120600 Manihot esculenta HOM05D005383 ORTHO05D006722 2.4e-18 95.9 96 55.2
Sabra03G0005300 Salix brachista HOM05D005383 ORTHO05D006722 5.3e-18 94.7 102 52.0
THA.LOC104801420 Tarenaya hassleriana HOM05D005383 ORTHO05D006722 5.3e-18 94.7 102 52.9
VMungo0251G3735 Vigna mungo HOM05D005383 ORTHO05D006722 5.3e-18 94.7 104 53.8
PGR042G1418 Punica granatum HOM05D005383 ORTHO05D006722 6.9e-18 94.4 97 50.5
TWI59G0781 Tripterygium wilfordii HOM05D005383 ORTHO05D006722 9.0e-18 94.0 96 54.2
Phvul.002G248200 Phaseolus vulgaris HOM05D005383 ORTHO05D006722 1.2e-17 93.6 104 53.8
Sed0026787 Sechium edule HOM05D005383 ORTHO05D006722 1.2e-17 93.6 101 51.5
MSTRG.5117 Avicennia marina HOM05D005383 ORTHO05D006722 1.5e-17 93.2 101 52.5
MD08G1239600 Malus domestica HOM05D005383 ORTHO05D006722 1.5e-17 93.2 104 54.8
Psat1g221920 Pisum sativum HOM05D005383 ORTHO05D006722 1.5e-17 93.2 92 55.4
CARHR260070 Cardamine hirsuta HOM05D005383 ORTHO05D006722 3.4e-17 92.0 99 53.5
Glyma.08G126300 Glycine max HOM05D005383 ORTHO05D006722 3.4e-17 92.0 93 55.9
Lalb_Chr13g0295611 Lupinus albus HOM05D005383 ORTHO05D006722 4.5e-17 91.7 100 52.0
MELO3C011837.2 Cucumis melo HOM05D005383 ORTHO05D006722 7.6e-17 90.9 92 53.3
CsaV3_5G029920 Cucumis sativus L. HOM05D005383 ORTHO05D006722 7.6e-17 90.9 92 53.3
DCAR_025351 Daucus carota HOM05D005383 ORTHO05D006722 7.6e-17 90.9 92 51.1
Oeu036675.1 Olea europaea HOM05D005383 ORTHO05D006722 7.6e-17 90.9 100 47.0
MSTRG.16504 Avicennia marina HOM05D005383 ORTHO05D006722 1.0e-16 90.5 95 56.8
Lsat_1_v5_gn_4_6600 Lactuca sativa HOM05D005383 ORTHO05D006722 1.0e-16 90.5 95 53.7
Lalb_Chr07g0185851 Lupinus albus HOM05D005383 ORTHO05D006722 1.0e-16 90.5 95 53.7
Aa31LG3G14030 Aethionema arabicum HOM05D005383 ORTHO05D006722 2.2e-16 89.4 71 60.6
Migut.B00804 Erythranthe guttata HOM05D005383 ORTHO05D006722 2.9e-16 89.0 99 52.5
HPP92_009272 Vanilla planifolia HOM05D005383 ORTHO05D006722 2.5e-15 85.9 91 53.8
HanXRQChr08g0209021 Helianthus annuus HOM05D005383 ORTHO05D006722 3.2e-15 85.5 113 48.7
C03p19190 Brassica napus HOM05D005383 ORTHO05D006722 5.5e-15 84.7 87 56.3
Sed0022153 Sechium edule HOM05D005383 ORTHO05D006722 5.5e-15 84.7 83 55.4
Actinidia00189 Actinidia chinensis HOM05D005383 ORTHO05D006722 9.4e-15 84.0 81 51.9
BolC3t14307H Brassica oleracea HOM05D005383 ORTHO05D006722 9.4e-15 84.0 81 56.8
BcaC01g06099 Brassica carinata HOM05D005383 ORTHO05D006722 1.6e-14 83.2 91 53.8
BraA03t10921Z Brassica rapa HOM05D005383 ORTHO05D006722 1.6e-14 83.2 93 50.5
HanXRQChr04g0103661 Helianthus annuus HOM05D005383 ORTHO05D006722 1.6e-14 83.2 91 52.7
unitig_699.g19853 Utricularia gibba HOM05D005383 ORTHO05D006722 2.1e-14 82.8 109 43.1
Eucgr.G00356 Eucalyptus grandis HOM05D005383 ORTHO05D006722 4.6e-14 81.6 96 50.0
A03p16300 Brassica napus HOM05D005383 ORTHO05D006722 6.1e-14 81.3 91 52.7
SGA_v2.0_scaffold42G15921 Striga asiatica HOM05D005383 ORTHO05D006722 1.0e-13 80.5 80 53.8
Zm00001eb267130 Zea mays HOM05D005383 ORTHO05D006722 3.0e-13 79.0 61 62.3
BcaC01g06075 Brassica carinata HOM05D005383 ORTHO05D006722 6.7e-13 77.8 75 57.3
Peaxi162Scf00003g03953 Petunia axillaris HOM05D000011 ORTHO05D011267 5.7e-12 74.7 64 56.2
unitig_747.g21262 Utricularia gibba HOM05D005383 ORTHO05D006722 7.4e-12 74.3 68 54.4
Lsat_1_v5_gn_8_160061 Lactuca sativa HOM05D005383 ORTHO05D006722 9.7e-12 73.9 60 56.7
ECA233G1887 Erigeron canadensis HOM05D005383 ORTHO05D006722 2.8e-11 72.4 100 47.0
Zm00001eb181970 Zea mays HOM05D005383 ORTHO05D006722 3.4e-09 65.5 52 57.7
Os02g0551900 Oryza sativa ssp. japonica HOM05D005383 ORTHO05D006722 4.5e-09 65.1 54 57.4
MD15G1431100 Malus domestica HOM05D005383 ORTHO05D006722 1.0e-08 63.9 77 48.1
Os05g0106000 Oryza sativa ssp. japonica HOM05D005383 ORTHO05D006722 6.5e-08 61.2 56 53.6
Zm00001eb243510 Zea mays HOM05D005383 ORTHO05D006722 1.4e-07 60.1 73 41.1
Mapoly0095s0037 Marchantia polymorpha HOM05D005383 ORTHO05D006722 1.2e-06 57.0 80 42.5


User provided reference genes

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