Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0069G030 Amborella trichopoda HOM05D005300 ORTHO05D006622 2.3e-57 225.3 114 100.0
ATR0794G038 Amborella trichopoda HOM05D005300 ORTHO05D006622 9.8e-40 166.8 92 91.3
ATR0681G167 Amborella trichopoda HOM05D005300 ORTHO05D006622 1.6e-37 159.5 115 74.8
Nn1g03500 Nelumbo nucifera HOM05D005300 ORTHO05D006622 2.3e-36 155.6 99 78.8
Glyma.06G306700 Glycine max HOM05D005300 ORTHO05D006622 1.9e-35 152.5 88 84.1
Glyma.12G098200 Glycine max HOM05D005300 ORTHO05D006622 2.5e-35 152.1 88 83.0
Phvul.011G103000 Phaseolus vulgaris HOM05D005300 ORTHO05D006622 2.5e-35 152.1 88 83.0
Psat0s4267g0040 Pisum sativum HOM05D005300 ORTHO05D006622 2.5e-35 152.1 88 83.0
TWI18G0506 Tripterygium wilfordii HOM05D005300 ORTHO05D006622 2.5e-35 152.1 92 80.4
TWI36G1224 Tripterygium wilfordii HOM05D005300 ORTHO05D006622 2.5e-35 152.1 92 80.4
TAR626G0150 Trochodendron aralioides HOM05D005300 ORTHO05D006622 4.3e-35 151.4 88 83.0
arahy.Tifrunner.gnm1.ann1.B9TUKK Arachis hypogaea HOM05D005300 ORTHO05D006622 5.6e-35 151.0 88 81.8
arahy.Tifrunner.gnm1.ann1.SJMT99 Arachis hypogaea HOM05D005300 ORTHO05D006622 5.6e-35 151.0 88 81.8
Ca_03278_v3 Cicer arietinum L. HOM05D005300 ORTHO05D006622 5.6e-35 151.0 88 81.8
TAR624G0116 Trochodendron aralioides HOM05D005300 ORTHO05D006622 5.6e-35 151.0 107 74.8
MSTRG.14149 Avicennia marina HOM05D005300 ORTHO05D006622 9.5e-35 150.2 92 78.3
Cpa.g.sc87.86 Carica papaya HOM05D005300 ORTHO05D006622 9.5e-35 150.2 88 80.7
QL08p032961 Quercus lobata HOM05D005300 ORTHO05D006622 9.5e-35 150.2 88 80.7
SGA_v2.0_scaffold159G37576 Striga asiatica HOM05D005300 ORTHO05D006622 1.2e-34 149.8 92 77.2
AUR62000009 Chenopodium quinoa HOM05D005300 ORTHO05D006622 1.6e-34 149.4 90 78.9
AUR62019178 Chenopodium quinoa HOM05D005300 ORTHO05D006622 1.6e-34 149.4 90 78.9
AUR62019179 Chenopodium quinoa HOM05D005300 ORTHO05D006622 1.6e-34 149.4 90 78.9
Medtr4g048590 Medicago truncatula HOM05D005300 ORTHO05D006622 1.6e-34 149.4 88 81.8
Atru.chr6.3194 Acer truncatum HOM05D005300 ORTHO05D006622 3.6e-34 148.3 83 84.3
HanXRQChr10g0295521 Helianthus annuus HOM05D005300 ORTHO05D006622 3.6e-34 148.3 88 78.4
Sabra02G0174700 Salix brachista HOM05D005300 ORTHO05D006622 3.6e-34 148.3 83 84.3
TPR.G4668 Trifolium pratense HOM05D005300 ORTHO05D006622 3.6e-34 148.3 88 80.7
CSS0027646 Camellia sinensis var. sinensis HOM05D005300 ORTHO05D006622 4.7e-34 147.9 86 80.2
Prupe.3G216500 Prunus persica HOM05D005300 ORTHO05D006622 4.7e-34 147.9 88 78.4
CiPaw.04G115200 Carya illinoinensis HOM05D005300 ORTHO05D006622 6.2e-34 147.5 88 79.5
Migut.H01227 Erythranthe guttata HOM05D005300 ORTHO05D006622 6.2e-34 147.5 86 82.6
Potri.002G228600 Populus trichocarpa HOM05D005300 ORTHO05D006622 6.2e-34 147.5 83 83.1
Solyc07g052290.1 Solanum lycopersicum HOM05D005300 ORTHO05D006622 6.2e-34 147.5 88 78.4
Sopen07g025910 Solanum pennellii HOM05D005300 ORTHO05D006622 6.2e-34 147.5 88 78.4
PGSC0003DMG400028948 Solanum tuberosum HOM05D005300 ORTHO05D006622 6.2e-34 147.5 88 78.4
CAN.G1296.1 Capsicum annuum HOM05D005300 ORTHO05D006622 8.1e-34 147.1 88 77.3
FvH4_6g43160 Fragaria vesca HOM05D005300 ORTHO05D006622 8.1e-34 147.1 92 77.2
FAN05G3018 Fragaria x ananassa HOM05D005300 ORTHO05D006622 8.1e-34 147.1 92 77.2
Lalb_Chr03g0028691 Lupinus albus HOM05D005300 ORTHO05D006622 8.1e-34 147.1 88 78.4
CSS0024072 Camellia sinensis var. sinensis HOM05D005300 ORTHO05D006622 1.1e-33 146.7 91 74.7
FAN02G3120 Fragaria x ananassa HOM05D005300 ORTHO05D006622 1.1e-33 146.7 92 77.2
EL10Ac4g10369 Beta vulgaris HOM05D005300 ORTHO05D006622 1.4e-33 146.4 90 76.7
Potri.014G154000 Populus trichocarpa HOM05D005300 ORTHO05D006622 1.4e-33 146.4 83 83.1
Sabra14G0116500 Salix brachista HOM05D005300 ORTHO05D006622 1.8e-33 146.0 83 81.9
FAN09G2150 Fragaria x ananassa HOM05D005300 ORTHO05D006622 2.3e-33 145.6 92 76.1
Peaxi162Scf00007g00072 Petunia axillaris HOM05D005300 ORTHO05D006622 3.1e-33 145.2 92 75.0
PGR042G1729 Punica granatum HOM05D005300 ORTHO05D006622 3.1e-33 145.2 83 80.7
Lsat_1_v5_gn_9_107520 Lactuca sativa HOM05D005300 ORTHO05D006622 4.0e-33 144.8 86 77.9
RcHm_v2.0_Chr2g0159081 Rosa chinensis HOM05D005300 ORTHO05D006622 4.0e-33 144.8 88 78.4
Lj1P766T34 Lonicera japonica HOM05D005300 ORTHO05D006622 5.2e-33 144.4 92 75.0
PSO541G4463 Papaver somniferum HOM05D005300 ORTHO05D006622 5.2e-33 144.4 92 78.3
PSO675G7879 Papaver somniferum HOM05D005300 ORTHO05D006622 5.2e-33 144.4 92 78.3
CANSAT64G1405 Cannabis sativa HOM05D005300 ORTHO05D006622 6.8e-33 144.1 88 77.3
Lj3g0003317 Lotus japonicus HOM05D005300 ORTHO05D006622 6.8e-33 144.1 88 78.4
ClCG02G008830 Citrullus lanatus HOM05D005300 ORTHO05D006622 8.9e-33 143.7 83 81.9
MELO3C019273.2 Cucumis melo HOM05D005300 ORTHO05D006622 8.9e-33 143.7 83 81.9
Manes.12G074100 Manihot esculenta HOM05D005300 ORTHO05D006622 8.9e-33 143.7 83 80.7
Oeu007114.1 Olea europaea HOM05D005300 ORTHO05D006622 8.9e-33 143.7 92 75.0
Actinidia08387 Actinidia chinensis HOM05D005300 ORTHO05D006622 1.2e-32 143.3 86 75.6
MD09G1110000 Malus domestica HOM05D005300 ORTHO05D006622 1.2e-32 143.3 82 81.7
Ciclev10015229m.g Citrus clementina HOM05D005300 ORTHO05D006622 2.0e-32 142.5 83 81.9
Sed0016669 Sechium edule HOM05D005300 ORTHO05D006622 2.0e-32 142.5 83 80.7
ECA240G1660 Erigeron canadensis HOM05D005300 ORTHO05D006622 2.6e-32 142.1 86 76.7
Aqoxy1G02098 Aquilegia oxysepala HOM05D005300 ORTHO05D006622 4.4e-32 141.4 90 74.4
Eucgr.A01121 Eucalyptus grandis HOM05D005300 ORTHO05D006622 5.8e-32 141.0 83 78.3
SalBow1G7639 Salvia bowleyana HOM05D005300 ORTHO05D006622 5.8e-32 141.0 92 72.8
Sc21g0001390 Simmondsia chinensis HOM05D005300 ORTHO05D006622 7.6e-32 140.6 83 79.5
Thecc.02G365500 Theobroma cacao HOM05D005300 ORTHO05D006622 7.6e-32 140.6 83 80.7
THA.LOC104826148 Tarenaya hassleriana HOM05D005300 ORTHO05D006622 1.3e-31 139.8 83 77.1
AL4G27860 Arabidopsis lyrata HOM05D005300 ORTHO05D006622 1.7e-31 139.4 83 75.9
AT2G32480 Arabidopsis thaliana HOM05D005300 ORTHO05D006622 1.7e-31 139.4 83 75.9
Cc05_g04360 Coffea canephora HOM05D005300 ORTHO05D006622 1.7e-31 139.4 92 72.8
Duzib251G0812 Durio zibethinus HOM05D005300 ORTHO05D006622 2.2e-31 139.0 83 78.3
Sp4g14840 Schrenkiella parvula HOM05D005300 ORTHO05D006622 2.9e-31 138.7 82 76.8
COL.COLO4_11250 Corchorus olitorius HOM05D005300 ORTHO05D006622 4.9e-31 137.9 83 78.3
Carub.0001s0441 Capsella rubella HOM05D005300 ORTHO05D006622 1.4e-30 136.3 83 77.1
Thhalv10017977m.g Eutrema salsugineum HOM05D005300 ORTHO05D006622 1.4e-30 136.3 83 74.7
Aa31LG1G19610 Aethionema arabicum HOM05D005300 ORTHO05D006622 1.9e-30 136.0 83 74.7
AL1G14900 Arabidopsis lyrata HOM05D005300 ORTHO05D006622 2.4e-30 135.6 83 74.7
A10p03670 Brassica napus HOM05D005300 ORTHO05D006622 3.2e-30 135.2 83 74.7
BraA10t42640Z Brassica rapa HOM05D005300 ORTHO05D006622 3.2e-30 135.2 83 74.7
Carub.0004s1382 Capsella rubella HOM05D005300 ORTHO05D006622 3.2e-30 135.2 83 73.5
BolC5t29115H Brassica oleracea HOM05D005300 ORTHO05D006622 4.1e-30 134.8 83 73.5
CARHR126300 Cardamine hirsuta HOM05D005300 ORTHO05D006622 4.1e-30 134.8 83 73.5
AT1G05140 Arabidopsis thaliana HOM05D005300 ORTHO05D006622 5.4e-30 134.4 83 74.7
BcaC02g11315 Brassica carinata HOM05D005300 ORTHO05D006622 5.4e-30 134.4 83 75.9
C04p17170 Brassica napus HOM05D005300 ORTHO05D006622 5.4e-30 134.4 83 75.9
BolC4t23267H Brassica oleracea HOM05D005300 ORTHO05D006622 5.4e-30 134.4 83 75.9
Gohir.A12G174000 Gossypium hirsutum HOM05D005300 ORTHO05D006622 5.4e-30 134.4 83 75.9
Gohir.D12G176700 Gossypium hirsutum HOM05D005300 ORTHO05D006622 5.4e-30 134.4 83 75.9
Gorai.008G189100 Gossypium raimondii HOM05D005300 ORTHO05D006622 5.4e-30 134.4 83 75.9
Sp1g03990 Schrenkiella parvula HOM05D005300 ORTHO05D006622 5.4e-30 134.4 83 73.5
SpUn0024_0150 Schrenkiella parvula HOM05D005300 ORTHO05D006622 5.4e-30 134.4 83 73.5
A05p13230 Brassica napus HOM05D005300 ORTHO05D006622 7.1e-30 134.0 83 74.7
BraA05t20264Z Brassica rapa HOM05D005300 ORTHO05D006622 7.1e-30 134.0 83 74.7
DCAR_012943 Daucus carota HOM05D005300 ORTHO05D006622 1.2e-29 133.3 83 75.9
CARHR004610 Cardamine hirsuta HOM05D005300 ORTHO05D006622 2.7e-29 132.1 83 74.7
Rhsim04G0052800 Rhododendron simsii HOM05D005300 ORTHO05D006622 2.7e-29 132.1 82 75.6
BcaB02g10466 Brassica carinata HOM05D005300 ORTHO05D006622 3.5e-29 131.7 83 73.5
C05p03380 Brassica napus HOM05D005300 ORTHO05D006622 7.8e-29 130.6 79 72.2
ATR0753G011 Amborella trichopoda HOM05D005300 ORTHO05D006622 8.6e-28 127.1 92 71.7
SEGI_01159 Sequoiadendron giganteum HOM05D005300 ORTHO05D006622 8.6e-28 127.1 104 63.5
Pp3c18_14380 Physcomitrium patens HOM05D005300 ORTHO05D006622 8.1e-26 120.6 99 59.6
Mapoly0064s0026 Marchantia polymorpha HOM05D005300 ORTHO05D006622 1.4e-25 119.8 88 63.6
Pp3c19_19130 Physcomitrium patens HOM05D005300 ORTHO05D006622 6.9e-25 117.5 99 60.6
SMO351G0125 Selaginella moellendorffii HOM05D005300 ORTHO05D006622 1.5e-24 116.3 102 57.8
Dinv39717 Davidia involucrata HOM05D005300 ORTHO05D006622 3.4e-24 115.2 61 85.2
PRCOL_00005585 Prasinoderma coloniale HOM05D005300 ORTHO05D006622 7.6e-24 114.0 102 52.9
Lalb_Chr19g0135951 Lupinus albus HOM05D005300 ORTHO05D006622 1.3e-23 113.2 82 68.3
ATR0820G169 Amborella trichopoda HOM05D005300 ORTHO05D006622 1.7e-23 112.8 70 81.4
AagrBONN_evm.TU.Sc2ySwM_344.3933 Anthoceros agrestis HOM05D005300 ORTHO05D006622 1.4e-22 109.8 88 56.8
CiPaw.03G159400 Carya illinoinensis HOM05D005300 ORTHO05D006622 1.9e-22 109.4 86 65.1
CBR_g50915 Chara braunii HOM05D005300 ORTHO05D006622 4.2e-22 108.2 88 60.2
Pp3c9_3170 Physcomitrium patens HOM05D005300 ORTHO05D006622 1.6e-21 106.3 86 57.0
MCO09G462 Micromonas commoda HOM05D005300 ORTHO05D006622 6.0e-21 104.4 87 57.5
Zm00001eb219720 Zea mays HOM05D005300 ORTHO05D006622 1.0e-20 103.6 87 55.2
Zm00001eb049010 Zea mays HOM05D005300 ORTHO05D006622 1.3e-20 103.2 99 51.5
Zm00001eb417680 Zea mays HOM05D005300 ORTHO05D006622 8.7e-20 100.5 87 54.0
GSVIVG01030436001 Vitis vinifera HOM05D005300 ORTHO05D006622 1.3e-18 96.7 64 67.2
Os03g0579000 Oryza sativa ssp. japonica HOM05D005300 ORTHO05D006622 2.1e-18 95.9 77 57.1
Cre03.g144164 Chlamydomonas reinhardtii HOM05D005300 ORTHO05D006622 5.3e-17 91.3 88 48.9
BcaC05g24426 Brassica carinata HOM05D005300 ORTHO05D006622 3.2e-14 82.0 47 74.5
CDE01G0785 Ceratophyllum demersum HOM05D001211 ORTHO05D001084 1.0e-12 77.0 65 58.5
CDE12G0066 Ceratophyllum demersum HOM05D005300 ORTHO05D006622 1.3e-12 76.6 42 81.0
ATR0681G370 Amborella trichopoda HOM05D005300 ORTHO05D006622 1.1e-11 73.6 70 62.9
MBI02_g21883_MAGBIO Magnolia biondii HOM05D005300 ORTHO05D006622 2.0e-08 62.8 31 87.1
CsaV3_2G034890 Cucumis sativus L. HOM05D005300 ORTHO05D006622 2.2e-07 59.3 27 92.6
BcaC02g07921 Brassica carinata HOM05D005300 ORTHO05D006622 3.8e-07 58.5 33 75.8
Nitab4.5_0009179g0010 Nicotiana tabacum HOM05D005300 ORTHO05D006622 4.9e-07 58.2 40 67.5
Cre17.g730100 Chlamydomonas reinhardtii HOM05D005300 ORTHO05D146069 2.4e-06 55.8 67 44.8


User provided reference genes

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