Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0049G059 Amborella trichopoda HOM05D006268 ORTHO05D008118 8.7e-193 676.8 337 100.0
TAR375G0229 Trochodendron aralioides HOM05D006268 ORTHO05D008118 1.2e-114 417.2 341 62.8
Haze_02942 Corylus avellana HOM05D006268 ORTHO05D008118 3.0e-113 412.5 342 61.7
GSVIVG01016051001 Vitis vinifera HOM05D006268 ORTHO05D008118 3.4e-112 409.1 335 60.0
Cfa010996 Carpinus fangiana HOM05D006268 ORTHO05D008118 9.8e-112 407.5 342 59.9
MELO3C006233.2 Cucumis melo HOM05D006268 ORTHO05D008118 6.4e-111 404.8 338 62.1
Sc26g0001930 Simmondsia chinensis HOM05D006268 ORTHO05D008118 8.3e-111 404.4 339 60.8
CiPaw.13G019100 Carya illinoinensis HOM05D006268 ORTHO05D008118 1.4e-110 403.7 344 60.5
RcHm_v2.0_Chr1g0341291 Rosa chinensis HOM05D006268 ORTHO05D008118 4.1e-110 402.1 336 61.6
PSO063G1446 Papaver somniferum HOM05D006268 ORTHO05D008118 9.2e-110 401.0 341 59.8
CANSAT54G1338 Cannabis sativa HOM05D006268 ORTHO05D008118 2.7e-109 399.4 341 59.5
CsaV3_3G010120 Cucumis sativus L. HOM05D006268 ORTHO05D008118 4.6e-109 398.7 338 61.5
FAN03G0807 Fragaria x ananassa HOM05D006268 ORTHO05D008118 4.6e-109 398.7 336 60.4
PGR083G0810 Punica granatum HOM05D006268 ORTHO05D008118 5.9e-109 398.3 342 60.2
Glyma.16G080700 Glycine max HOM05D006268 ORTHO05D008118 7.8e-109 397.9 341 59.5
Sed0013667 Sechium edule HOM05D006268 ORTHO05D008118 1.0e-108 397.5 337 59.6
FAN06G0712 Fragaria x ananassa HOM05D006268 ORTHO05D008118 1.3e-108 397.1 336 60.4
Glyma.03G093200 Glycine max HOM05D006268 ORTHO05D008118 1.3e-108 397.1 341 59.5
Lj3g0019214 Lotus japonicus HOM05D006268 ORTHO05D008118 1.3e-108 397.1 341 60.4
MD00G1098400 Malus domestica HOM05D006268 ORTHO05D008118 1.3e-108 397.1 336 61.0
TWI59G0917 Tripterygium wilfordii HOM05D006268 ORTHO05D008118 1.7e-108 396.7 335 59.4
FvH4_7g08020 Fragaria vesca HOM05D006268 ORTHO05D008118 2.9e-108 396.0 336 59.8
PSO782G1498 Papaver somniferum HOM05D006268 ORTHO05D008118 2.9e-108 396.0 341 58.4
CSS0005578 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 5.0e-108 395.2 339 59.0
Eucgr.D01130 Eucalyptus grandis HOM05D006268 ORTHO05D008118 8.6e-108 394.4 342 59.4
Nn1g00551 Nelumbo nucifera HOM05D006268 ORTHO05D008118 1.5e-107 393.7 342 59.9
DCAR_029548 Daucus carota HOM05D006268 ORTHO05D008118 1.9e-107 393.3 341 58.4
Prupe.2G109200 Prunus persica HOM05D006268 ORTHO05D008118 2.5e-107 392.9 341 59.2
Nitab4.5_0001209g0060 Nicotiana tabacum HOM05D006268 ORTHO05D008118 4.3e-107 392.1 337 58.5
Nitab4.5_0001476g0040 Nicotiana tabacum HOM05D006268 ORTHO05D008118 9.5e-107 391.0 337 58.8
Psat4g207400 Pisum sativum HOM05D006268 ORTHO05D008118 9.5e-107 391.0 339 60.2
QL04p024264 Quercus lobata HOM05D006268 ORTHO05D008118 1.2e-106 390.6 365 56.4
Solyc01g080940.3 Solanum lycopersicum HOM05D006268 ORTHO05D008118 2.1e-106 389.8 337 59.6
Aqoxy3G02409 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 2.8e-106 389.4 342 59.6
Aqoxy3G02437 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 2.8e-106 389.4 342 59.6
Gorai.N008000 Gossypium raimondii HOM05D006268 ORTHO05D008118 2.8e-106 389.4 340 60.9
Phvul.010G033866 Phaseolus vulgaris HOM05D006268 ORTHO05D008118 2.8e-106 389.4 341 58.4
Sopen01g032530 Solanum pennellii HOM05D006268 ORTHO05D008118 2.8e-106 389.4 337 59.6
Lalb_Chr07g0194551 Lupinus albus HOM05D006268 ORTHO05D008118 8.0e-106 387.9 344 58.7
Actinidia33290 Actinidia chinensis HOM05D006268 ORTHO05D008118 1.0e-105 387.5 342 59.4
Duzib128G0100 Durio zibethinus HOM05D006268 ORTHO05D008118 1.4e-105 387.1 347 58.2
Rhsim01G0145800 Rhododendron simsii HOM05D006268 ORTHO05D008118 1.8e-105 386.7 337 57.9
CAN.G1551.1 Capsicum annuum HOM05D006268 ORTHO05D008118 3.1e-105 386.0 337 59.3
Thecc.03G001300 Theobroma cacao HOM05D006268 ORTHO05D008118 3.1e-105 386.0 340 60.0
VMungo0331G0592 Vigna mungo HOM05D006268 ORTHO05D008118 3.1e-105 386.0 341 57.8
Hund26937 Selenicereus undatus HOM05D006268 ORTHO05D008118 5.2e-105 385.2 335 57.9
SEGI_16160 Sequoiadendron giganteum HOM05D006268 ORTHO05D008118 5.2e-105 385.2 355 56.3
Gohir.A06G169600 Gossypium hirsutum HOM05D006268 ORTHO05D008118 6.8e-105 384.8 341 59.8
PGSC0003DMG400001820 Solanum tuberosum HOM05D006268 ORTHO05D008118 1.5e-104 383.6 337 58.5
MSTRG.4977 Avicennia marina HOM05D006268 ORTHO05D008118 3.4e-104 382.5 335 58.8
Sabra02G0181600 Salix brachista HOM05D006268 ORTHO05D008118 5.8e-104 381.7 334 58.1
Cc02_g26120 Coffea canephora HOM05D006268 ORTHO05D008118 7.5e-104 381.3 337 59.1
Potri.002G238300 Populus trichocarpa HOM05D006268 ORTHO05D008118 7.5e-104 381.3 337 57.9
SalBow4G0743 Salvia bowleyana HOM05D006268 ORTHO05D008118 1.1e-102 377.5 331 57.4
vmacro21105 Vaccinium macrocarpon HOM05D006268 ORTHO05D008118 1.1e-102 377.5 337 56.4
EL10Ac1g00692 Beta vulgaris HOM05D006268 ORTHO05D008118 1.9e-102 376.7 335 57.3
Migut.N01815 Erythranthe guttata HOM05D006268 ORTHO05D008118 3.2e-102 375.9 338 58.0
Ca_23170_v3 Cicer arietinum L. HOM05D006268 ORTHO05D008118 5.4e-102 375.2 341 57.5
FAN01G0355 Fragaria x ananassa HOM05D006268 ORTHO05D008118 9.2e-102 374.4 380 53.2
AUR62023342 Chenopodium quinoa HOM05D006268 ORTHO05D008118 2.7e-101 372.9 335 56.7
Lsat_1_v5_gn_7_10860 Lactuca sativa HOM05D006268 ORTHO05D008118 2.7e-101 372.9 338 58.0
Ah.06g189690 Amaranthus hybridus HOM05D006268 ORTHO05D008118 1.7e-100 370.2 351 55.6
Medtr8g010550 Medicago truncatula HOM05D006268 ORTHO05D008118 7.3e-99 364.8 340 55.6
ClCG05G002670 Citrullus lanatus HOM05D006268 ORTHO05D008118 9.5e-99 364.4 338 58.0
HanXRQChr04g0123661 Helianthus annuus HOM05D006268 ORTHO05D008118 1.2e-98 364.0 338 57.7
Ciclev10021110m.g Citrus clementina HOM05D006268 ORTHO05D008118 6.2e-98 361.7 335 54.6
COL.COLO4_19510 Corchorus olitorius HOM05D006268 ORTHO05D006513 8.1e-98 361.3 336 56.8
CSS0033423 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 2.3e-97 359.8 339 55.2
BcaB05g22409 Brassica carinata HOM05D006268 ORTHO05D008118 1.3e-95 354.0 337 53.7
C02p13500 Brassica napus HOM05D006268 ORTHO05D008118 4.1e-94 349.0 337 54.0
BolC2t07462H Brassica oleracea HOM05D006268 ORTHO05D008118 4.1e-94 349.0 337 54.0
BraA02t05859Z Brassica rapa HOM05D006268 ORTHO05D008118 9.2e-94 347.8 331 54.7
Aa31LG11G10 Aethionema arabicum HOM05D006268 ORTHO05D008118 1.2e-93 347.4 334 54.8
BcaC03g14111 Brassica carinata HOM05D006268 ORTHO05D008118 1.2e-93 347.4 331 54.4
A02p07860 Brassica napus HOM05D006268 ORTHO05D008118 1.6e-93 347.1 331 55.6
unitig_22.g5778 Utricularia gibba HOM05D006268 ORTHO05D008118 4.6e-93 345.5 339 55.8
Atru.BG.53.p Acer truncatum HOM05D006268 ORTHO05D008118 7.8e-93 344.7 328 56.4
Thhalv10014126m.g Eutrema salsugineum HOM05D006268 ORTHO05D008118 1.0e-92 344.4 337 53.4
Os03g0390700 Oryza sativa ssp. japonica HOM05D006268 ORTHO05D008118 2.3e-92 343.2 330 54.2
Zm00001eb392560 Zea mays HOM05D006268 ORTHO05D008118 1.6e-90 337.0 335 52.5
THA.LOC104799599 Tarenaya hassleriana HOM05D006268 ORTHO05D008118 6.2e-90 335.1 346 51.7
Sp6g19880 Schrenkiella parvula HOM05D006268 ORTHO05D008118 1.4e-89 334.0 337 51.6
AUR62013813 Chenopodium quinoa HOM05D006268 ORTHO05D008118 8.9e-89 331.3 331 52.3
AL8G34320 Arabidopsis lyrata HOM05D006268 ORTHO05D008118 4.4e-88 328.9 337 52.2
Manes.08G055700 Manihot esculenta HOM05D006268 ORTHO05D008118 2.2e-87 326.6 293 58.4
HPP92_028001 Vanilla planifolia HOM05D006268 ORTHO05D008118 1.1e-86 324.3 340 50.0
arahy.Tifrunner.gnm1.ann1.EHLP6C Arachis hypogaea HOM05D006268 ORTHO05D008118 2.4e-86 323.2 337 51.6
CARHR272020 Cardamine hirsuta HOM05D006268 ORTHO05D008118 5.4e-86 322.0 339 50.7
arahy.Tifrunner.gnm1.ann1.V3PJPX Arachis hypogaea HOM05D006268 ORTHO05D008118 1.6e-85 320.5 337 51.0
AT5G58220 Arabidopsis thaliana HOM05D006268 ORTHO05D008118 2.1e-85 320.1 338 52.4
Carub.0008s1876 Capsella rubella HOM05D006268 ORTHO05D008118 6.0e-85 318.5 338 51.2
SMO367G0371 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 1.6e-82 310.5 360 48.9
TPR.G9770 Trifolium pratense HOM05D006268 ORTHO05D008118 1.6e-82 310.5 335 49.3
ECA236G2174 Erigeron canadensis HOM05D006268 ORTHO05D008118 1.3e-79 300.8 313 54.0
Mapoly0090s0043 Marchantia polymorpha HOM05D006268 ORTHO05D008118 1.9e-78 297.0 341 48.1
Pp3c4_10360 Physcomitrium patens HOM05D006268 ORTHO05D008118 1.1e-75 287.7 337 49.3
Dinv43994 Davidia involucrata HOM05D006268 ORTHO05D008118 1.9e-75 287.0 247 59.5
FAN10G2079 Fragaria x ananassa HOM05D006268 ORTHO05D008118 2.1e-74 283.5 306 51.6
CDE04G2879 Ceratophyllum demersum HOM05D006268 ORTHO05D008118 6.2e-74 282.0 275 54.5
AagrBONN_evm.TU.Sc2ySwM_228.2734 Anthoceros agrestis HOM05D006268 ORTHO05D008118 6.6e-68 261.9 313 46.0
SGA_v2.0_scaffold95G28736 Striga asiatica HOM05D006268 ORTHO05D008118 4.6e-61 239.2 250 52.4
Lj7C555G14 Lonicera japonica HOM05D006268 ORTHO05D008118 1.3e-58 231.1 185 62.2
CBR_g30589 Chara braunii HOM05D006268 ORTHO05D008118 6.2e-58 228.8 464 34.5
Cre17.g735950 Chlamydomonas reinhardtii HOM05D006268 ORTHO05D008118 1.6e-53 214.2 349 37.0
PRCOL_00004243 Prasinoderma coloniale HOM05D006268 ORTHO05D008118 1.8e-52 210.7 337 38.3
DCAR_025012 Daucus carota HOM05D006268 ORTHO05D008118 1.1e-46 191.4 162 59.9
BcaB05g22411 Brassica carinata HOM05D006268 ORTHO05D008118 6.7e-44 182.2 192 51.6
Lj7C555T10 Lonicera japonica HOM05D006268 ORTHO05D008118 5.3e-41 172.6 150 58.0
SMO367G0431 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 1.9e-38 164.1 156 53.2
SMO197G0011 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 2.1e-37 160.6 145 55.2
Cpa.g.sc74.89 Carica papaya HOM05D006268 ORTHO05D008118 7.4e-35 152.1 178 47.2
MCO07G440 Micromonas commoda HOM05D006268 ORTHO05D008118 5.9e-32 142.5 150 48.0
SHI28983 Sapria himalayana HOM05D006268 ORTHO05D008118 1.9e-30 137.5 125 55.2
Sc26g0001910 Simmondsia chinensis HOM05D006268 ORTHO05D008118 3.9e-28 129.8 103 60.2
BolC9t57859H Brassica oleracea HOM05D006268 ORTHO05D008118 6.5e-23 112.5 81 64.2
Oeu050272.1 Olea europaea HOM05D006268 ORTHO05D008118 8.5e-23 112.1 72 66.7
Hma1.2p1_0076F.1_g039600 Hydrangea macrophylla HOM05D006268 ORTHO05D008118 1.5e-19 101.3 63 69.8
MCO05G065 Micromonas commoda HOM05D006268 ORTHO05D008118 5.7e-19 99.4 132 43.2
Cfa010995 Carpinus fangiana HOM05D006268 ORTHO05D008118 6.8e-12 75.9 58 58.6
BcaC04g19902 Brassica carinata HOM05D006268 ORTHO05D008118 4.1e-09 66.6 57 52.6
MD02G1236900 Malus domestica HOM05D006268 ORTHO05D008118 1.2e-08 65.1 133 35.3


User provided reference genes

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